Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->LBD16                             <---------HSFB2a(2)                             --------->HSFB2a(2)  <-------TEIL                <---------ZAT18         <---------WOX13(1)       <------ZmHOX2a(2)  <-----------GT1 <-----------GT1 -------->P  --------->DAG2 <---------LBD16      <-----------GT1<-----------GT1 --------->AHL20(2) -----------GT1 --------->ZAT18      <---------YAB1    <---------AHL20(2)       <---------AHL20(2)   atttacccgatcgataaggggacttgattttccggacttctgatttactatatacattttttttttttacaacttcatataaaaaaatatgttttctgta  14698100            <---------TOE2(3)                         <----------DOF2                           <----        <---------YAB1                                --------->TOE2(3)  --------->AHL20(2)  --------      --------->AHL20(2)                        --------->YAB1<---------AHL20(2)         ----------->GT1      <---------AHL20(2)             --------->AHL20(2)       --------->AHL20(2)  --------->AHL20(2)      --------->ATHB51        <----------DOF2--------->YAB1  --------->AHL20(2) <----------DOF2 -----   aatttgaattatttatggattgaacatcaaaactttagattaaacaacaataacaactttagattaaattttggtttaaattctttaaatctagttaatc  14698200                                                                                                    -                                                  --------->ATHB12              <-------GAMYB <------ -------GT1                          <------ZmHOX2a(2)                          ----------->GT1     < ->WOX13(1)              --------->ATHB12        <---------YAB1      <----------DOF2         <------- ---->YAB1              <---------YAB1--------->ATHB12         <---------ICU4  ----------->GT1<------   acaacttgttgtcaaaacattttcttatgatttgtttcgatcatttgtttgatgatttgttttgatcatttctttcactggcagttaaaatttccatcat  14698300                                                   <---------bZIP60(1)                                                ----------->HVH21                                              <---------AtLEC2                                           --------->ZAT14           <---------MYB46(3)                                           <---------ZAT18           ----------->GT1                                           --------->ZAT18      ------------>CBF                                           <---------ZAT14  --------->AHL20(1)                      <---------ICU4 ------>MYB83<---------WRKY18(1)<---------ATHB12 -------->ZAT6    <---------AHL20(2) ------>MYB46(1)        <---------AHL20(1) --HAHB4          --------->AHL20(2) --------->MYB52(1)     <---------ARR11(3) -----------GT1  --------->AHL20(2)--------->MYB46(3)       --------->ARR11(3) --ATHB12   --------->ANAC46       <---------MYB46(2)    --------->AHL20(2)    <-----------GT1 ---ICU4<-----------GT1           --------->ANAC46 --------->bZIP60(1)        --------->AHL20(2)<----   tttcactattttacacaaaattaataagtatggttcaccaaacagtgcgcatgacctcataaaatattcaatggttacaaataactaaacccatcccaaa  14698400                      <---------ALFIN1                      --------->ANAC46                    ----------->RAV1(1)               ------->GAMYB              <---------MYB52(2)                                                   <---------AHL20(2)              --------->MYB46(3)                                             --------->AHL20(2)           <----------ID1                                                    <---------AHL20(2)  <---------------AGL15                                                      --------->AHL20(1)  <----------DOF2   <---------ALFIN1                    ----------->GT1      <---------AHL20(1)  --------------->AGL15       --------->YAB1           --------->DAG2       <---------ATHB12 ----------------->AGL2      <---------AHL20(2) ----------->GT1   ------------------------>ANAC81 ----------------->AGL3      <---------YAB1------------>CBF      --------->DAG2   --------->YAB1   -- <-----------------AGL3     --------->AHL20(2)  --------->YAB1  ---------->DOF2  --------->AHL20(2)-- -----ATHB12----------->RAV1(1)     ----------->GT1   ---------->DOF2   ------------>CBF           --   cattctttatttagcaacaaacccacactatataatagttgtaaattcaatggtaaaaaagtaaaaaaaagctatccaataaaataaaaatggttctatc  14698500                             --------->ICU4                                            --------->CCA1(2)                 <---------ICU4                                                      <---------ZAT2                 --------->ATHB12                                                    <---------At4g35610                 --------->YAB1                                --------->ANAC58      --------->ZAT2                 <------------ATHB5                      ----------->RAV1(1)    --------->ANAC58              --------->WOX13(1)  --------->KAN4(2)      --------->MYB52(1)     --------->ANAC58        <---------ATHB51     <---------YAB1          --------->At4g35610       --------->WOX13(1)        --------->ICU4  <----------DOF2              --------->ZAT18        --------->ANAC46 ------->ANAC58  -------->ATHB1  <---------KAN4(1)--------->ICU4            --------->ANAC58 ------->ANAC58 <---------ATHB12<---------YAB1<-----------TGA1 --------->ANAC58--------->GLK1(1) ------->ANAC46 --------->ICU4--------->YAB1 --------->YAB1 ------->GAMYB   --------->ANAC58   caagaaaacaattatgcaatcattcgctcttatgattattctatctatcgtcatgagcacaacagaagcaaaaaccataggcaatccagctatgcgagaa  14698600                              <---------ZAT2                             --------->ANAC58                             --------->ANAC46                             --------->ANAC58                           --------->LBD16                    --------->LBD16                    --------->HSFB2a(2)                    ------>ZmHOX2a(1)                    <---------HSFB2a(2)                  ----------->RAV1(2)                 ==============HOX2a_HOX2a        --------->LBD16                            <-------                 ===============HOX2a_HOX2a      ------->GAMYB                               <-------        <---------TOE2(3)------>ZmHOX2a(2)      --------->DEAR3(2)                           <-------      --------->MYB52(1)<------ZmHOX2a(2)       --------->MYB46(3)                           <-------      ---------->DOF2  --------->ARR14(2)      -------->P                            ---------->DOF2    --------->TOE2(3)  <---------ARR14(2)      --------->MYB52(1)  <-----------RAV1(2)   --------->ARR11(3)  ------->TEIL   ------>ZmHOX2a(1)  ----------->GT1             <-----------GT1     <---------WRKY45   gatgaacctaaaggttgtcctcctggatccccagcaagttgtaaaatgcaaccggctaatccatataaaccaggttgtgaagctagtcaaagatgtcgtg  14698700                                           ----------->GT1                                          <---------TOE2(3)                                         <---------ICU4                                         --------->YAB1                                    --------->AHL20(1)                               --------->AHL20(2)                           --------->AHL20(2)                      <---------AHL20(2)--------->ICU4                   <---------AHL20(2) --------->YAB1                 <---------AHL20(2) --------->AHL20(2) --ANAC58     --------->AHL20(2)   --------->YAB1            <---------AHL20(2) --ANAC58     <---------AHL20(1) --------->AHL20(2)       ----------->GT1 --ANAC46 <---------YAB1   <---------AHL20(2)    --------->TOE2(3)             ----------->GT1   ---- --bZIP60(2)  --------->AHL20(1)--------->YAB1  <---------ANAC55(2)   ----------->RAV1(1)--------->AHL20(2)   gtacttgataatatgatatattattttatataaataaaaataataatgttacataaataagagttaatttcccaacaaattttgtaaaatataaaataca  14698800                                            <---------ICU4                                            -------->HAHB4                                           --------->ICU4                                           <---------ATHB51                                        --------->AHL20(2)                   --------->YAB1     ----------->GT1                                          <-----         <------------MYB.PH3(1)     <---------TOE2(3)                                     <---------ZAT6       <-----------GT1              ---------->DOF2                                <---------YAB1 ------>DOF2      <---------YAB1  <---------AHL20(2)                             --------->CCA1(2)   aaagttttgtaactgtttttatgagaataaaactattttaaagtaattatgcctaaatttgtgtctcttcttgttattttgagttatgagttagtgttta  14698900                                          <---------AHL20(2)                                         --------->AHL20(2)                                         -                                         <---------AHL20(1)                                  ========                                         <---------AHL20(2)       ----------->GT1            <-------                      <---------YAB1     --------->AHL20(1)    ---------->DOF2               --------              --------->At4g35610   --------->AHL20(2)    <-------TEIL               ------->GAMYB---     <---------AHL20(2)         ----------->GT1       --------------->AtSPL8         --------->YAB1-- ----AHL20(2) <---------At4g35610   <---------AHL20(2)<---------------AtSPL8        --------->MYB46(3)   atcttgtttattttgcagctaattatccatgatgttgtttaaataaaatttgaagatgagtacataaaaggtcattaacttatacaaccatcaaactaaa  14699000  Previous    Next  AGI:  At2g34825.1    Description:  RALFL20 (RALF-LIKE 20). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32885.1) Range:  from: 14698490    to: 14698708    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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