Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------AHL20(2)                                                                                       --------->AHL20(2)                                                                                   --------->AHL20(2)                                                                                  <---------AHL20(2)                                                                              <---------AHL20(2)                 <---------YAB1                                               --------->AHL20(2)           <---------AHL20(2)                                            --------->AHL20(1)       <---------AHL20(2)                                                <---------AHL20(1)      --------->ARR11(3)                                                 <---------AHL20(2)      <---------ARR11(3)          <---------ARR14(2)    <---------AHL20(2)   --------->YAB1      --------->AHL20(1)         <------ZmHOX2a(1)      --------->AHL20(2)  <---------YAB1        ---      <---------AHL20(1)     <---------ANAC58       --------->ICU4   <---------CCA1(1) <---------AHL20(1)      --------->AHL20(2)     <---------ANAC58       --------->AHL20(2)   --------->AHL20(2)<---------ICU4      <---------AHL20(2)     <---------ANAC46       <XXXXXXXXXXXXXXXXXXXXXMIR828  --------->AHL20(2)     --------->AHL20(2)     <------NtERF2     --------->YAB1         <---------RVE1(1) --------->AHL20(1)   --------->AHL20(2)  <-----------RAV1(1) --------->YAB1           --------->ARR11(3)<---------AHL20(2) --------->AHL20(2)   <---------TOE2(3)  <---------WOX13(1)         <---------ARR11(3)--------->AHL20(2)   aaaaaaaatatatttgattatgtttatgttggcgaggaaactgattaataagaaatatttatttaagctagatattttattaaaataaataaattatgtc  14696300              <-------GAMYB             <---------MYB46(3)            --------->ALFIN1          <---------ZAT2         <---------DEAR3(1)         <---------AtMYB61     <---------LBD16  <--------ATHB1             ----------->GT1  -------->HAHB4        ---------->DOF2                 <---------ARR11(3)  <---------ICU4   --------------->AGL15             <---------DAG2 <---------ATHB51  <---------------AGL15             <----------DOF2 --------->ICU4   ----------------->AGL3          ------>ZmHOX2a(1)   --------->TOE1(3) <---------ATHB12 ----------------->AGL2    <-----------GT1           --------->TOE2(3) --->ZmHOX2a(1)   ----------------->AG --------->LBD16 <---------CCA1(2)                     <-------   ctaataattcggaggtggttaccaaaaaaagatgtaaaacccgaagtaactcctcctttatcttcgctaaaaccctaacctctctcagtccgactctttc  14696400                          --------->ZAT14                         <---------MYB52(1)                        <-------GAMYB             --------->ANAC46                                                     --------->TOE2(3)             <---------ANAC55(2)                                               ----------->RAV1(1)             --------->ANAC55(2)   --------->WOX13(1)                       --------->ANAC46 ---DOF2   <---------ANAC46    ----------->GT1   --------->TOE2(3)     ---------->DOF2            ---   tctctcatatataacgcgtaagagacagttaactagtaaatcaacttacaacgttgaagtctacttgaaacaaaaaagacacaacattatcgtctaaaat  14696500                                           <----------DOF2                                       ------>ZmHOX2a(1)                              --------->ARR14(2)                              <-----------GT1               <---------WOX13(1) ------>ZmHOX2a(1)             --------->ATHB12 --------->ARR11(3)          --------->TOE2(3)          <----------DOF2     <---------ARR14(2)<---------DAG2       --------->ARR11(3)    <---------CCA1(2)  <----------DOF2                              <-------       <---------ARR11(3)  <---------CCA1(2) <-----------GT1                                 <------- ------>WOX13(1)  <---------GLK1(2)  ----------->RAV1(2)<-----------GT1       <---------CCA1(2) -----   caatctacaggtctttcattgattctctcatatatcctctcctgtctttacttttttttttcttaacttgttttatacgtctatctatatatgtaagctc  14696600                                                                         --------->REM1(1)                                                                         <---------ALFIN1                                                                      <---------ANAC58                                 <---------ICU4                       <---------ANAC58                        --------->TOE2(3)                          <---------WOX13(1)                        --------->TOE1(3) <---------YAB1          <------------CBF          ---------->DOF2       --------->ICU4                   --------->ATHB12         --------->AHL20(2)   <---------ICU4                    <---------YAB1 --At4g35610          <---------TOE2(3)  --------->AHL20(2)     ------>ZmHOX2a(1)                  <- --ZAT2  <---------AHL20(2)   --------->YAB1                  ----------->RAV1(2)                  -- ------>GT1           <---------TOE1(3)  <---------AHL20(2)------>ZmHOX2a(1)       <----------DOF2 <-   gttactagtaattaaagcttagttaagcttaataataatgtattaaaatagtctgtaactcctctcctgattgcttcaccttcttctttactacaggttt  14696700                                                             <-----------RAV1(2)                                                         --------->At4g35610                                                         <---------ZAT2                                                         <---------At4g35610                       --                                                         --------->ZAT2                            --                                                   ------>ZmHOX2a(1)           --------->LBD16    ---                                                ------>ZmHOX2a(1)             --------->LBD16 -------                          <---------At4g35610=============HOX2a_HOX2a <---------DAG2        <--------                         --------->ANAC58    <------ZmHOX2a(2)        <----------DOF2    --------->ICU4    ------>ZmHOX2a(1)    --------->ANAC58    ==========================HOX2a_HOX2a       <---------YAB1   *TSS     <---------AtLEC2      <----------DOF2----------->RAV1(2) <---------ANAC58  --------->CCA1(2) --------ZAT2        <---------ANAC58       <---------ARR14(2)       <---------ANAC58 <---------ARR14(2) ------->At4g35610   <---------ANAC58       --------->ARR11(3)  <------ZmHOX2a(1)     --------->ARR14(2) --------At4g35610<---------WOX13(1)        --------->ARR14(2)--------->LBD16<---------HSFB2a(2) <---   cagctcctcaatgtccatggattgcttaagctacttctttaactacgatcctcctgtccagctccaggattgctttattcccgagatggatatgattatc  14696800                                   <---------ZAT2                                    ------>MYB46(1)                                   --------->ZAT2                                    ------>MYB83                                --------->LBD16                                     <---------ALFIN1         --------->MYB52(2)    --------->ANAC58                                --------->DEAR3(1) --------->HVH21               --------->ANAC58                           <-----------HVH21    <----- ------->LBD16                 --------->ANAC46--------->At4g35610   --------->HSFC1(2)  --------->WRKY45 ------>LBD16                  --------->RAP2.6(2)>>>>>>>>>>>>>>>>>LFY    ------>ZmHOX2a(1)---------- -->KAN4(2)                    ------->GAMYB   <---------At4g35610   <---------HSFB2a(1) --------->WRKY12 -YAB1 <---------MYB52(1)--------->TOE2(3)  <-------TEIL             <---------HSFC1(2)<----------DOF2 ------LBD16    <<<<<<<<<TBF1 --------->MYB46(3) --------->ANAC46    --------->HSFB2a(1) --------->WRKY38(1)   cctgaaaccgatagtttcttcttccaatctcaaccgcaactggagtttcatcagccattgtttcaagaagaagctccttcacagacccactttgaccctt  14696900                                                                      ----------->HVH21                                                                      --------->ANAC46                          --------->ARR11(3)                          --------->ANAC58                          <---------ARR11(3)                          --------->ANAC58                         --------->GLK1(1)           --------->ARR11(3)                      --------->ANAC58               <---------ARR11(3)                      --------->ANAC58           --------->ANAC58   --------->ANAC46          ------>NtERF2                   --------->LBD16               --------->ANAC58  --------->TOE1(2)         --------                 <---------LBD16         --------->TOE1(3)    ------->GAMYB                  -------- ----------->HVH21--------->ANAC46       --------->TOE2(3)   --------->ANAC58                -------- -----DOF2  <----------DOF2             --------->ZAT6       --------->ANAC58              <---------ALFIN1 >ID1   <---------GLK1(2)<---------GLK1(1)   ---------->DOF2 --------->ANAC46      <----------DOF2 --   tctgcgaccagtttctttctccgcaagaaatctttctccctaaccctaaaaacgaaatcttcaacgaaacacacgacctcgatttctttctccccacgcc  14697000                                                                   <---------GLK1(2)                                        --------->YAB1       --------->SPL7                                      --------->ANAC58       --------->ARR14(2)                                    --------->ZAT6           <---------ARR14(2)                               ----------->GT1              ----------->HVH21                      <-                               --------->YAB1             <---------ANAC55(2)             <---------ALFIN1 --------->ANAC58          --------->REM1(1)              --------->RAP2.6(2)            <------NtERF2 --------->ANAC46          <---------YAB1                 --------->ANAC55(2)           ----------->RAV1(1) --------->ANAC58      <---------ZAT2 --------->ANAC46 --------->ARR14(2)               ------>NtERF2 ->ANAC46              <---------At4g35610           --------->LBD16                   ----------->HVH21 ->ANAC58              --------->At4g35610          <---------HSFB2a(2)                --------->DEAR3(1) ->ANAC58<-----------------------TaNAC69(2)         --------->HSFB2a(2)              <---------RAP2.3(1) -------->DOF2         --------->ZAT2 --------->ANAC58 <---------ARR14(2)        <----------DOF2   <-   aaaacgccagagacttgttaactccagctacaattgtaacactcaaaaccatttccagagccgtaacccgaatttcttcgaccctttcggcgacactgat  14697100                     <---------LBD16                     <-----------RAV1(2) --------->GLK1(1)                     --------->HSFB2a(2)<---------ARR14(2)                   ------>MYB83       --------->LBD16              <---------CCA1(2)      --------->HSFB2a(2)           <---------------AtSPL8    <---------ANAC55(2)                  <------ZmHOX2a(2)           --------------->AtSPL8    <---------HSFB2a(2)                 --------->ARR11(3)        <---------ARR11(3)           --------->ANAC55(2)           <------NtERF2        --------->GLK1(2)           <---------LBD16                <---------LBD16        --------->ARR14(2)        --------->ARR14(2)               --------->LBD16        --------->ARR11(3)       <---------GLK1(1)                <---------ANAC46        <---------ARR14(2)<---------HSFB2a(1)                     <---------LBD16       <---------GLK1(2)  --------->HSFC1(2)                     <---------LBD16     --------->LBD16 <---------HSFB2a(2)--------->ARR14(2)     <------MYB46(1)                      <    <---------HSFB2a(2)   <---------HSFC1(2)                   <------MYB83                   -------    --------->HSFB2a(2) <------ZmHOX2a(1)<---------GLK1(1)   <--------P --------->GLK1(1)    --------    --------->HSFC1(1)--------->LBD16<---------ANAC46     <---------TOE2(3)                  -------- --------ANAC58    ------>MYB46(1)<---------ARR14(2) <----------DOF2<------NtERF2          --------->MYB52(1) --------ANAC58------->TEIL   <---------ANAC46 <----------DOF2--------->MYB59         ---------->DOF2   ttcgttccagaatcttgtaccttccaggagtttcgagttccggatttctctttagctttcaaggtaggccggggagatcaagatgactcaaagaaaccga  14697200  Previous    Next  AGI:  At2g34820.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G30670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46758.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 14696703    to: 14697958    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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