Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <-------TEIL                                                   --------->CCA1(2)                                                  --------->ARR14(2)                                              <------ZmHOX2a(1)                                            --------->MYB59            ----------->HVH21             <<<<<<<<<MYB1          <---------At4g35610             <<<<<<<<<MYB2     --------->AHL20(2)     <-----------HVH21 <---------YAB1  --------->ANAC58         <---------MYB52(1)---------->DOF2 --------->YAB1 ---------DOF2   --------->ANAC58    --------->GLK1(2)   --------->YAB1    <---------YAB1     <------ --AtLEC2 --------->At4g35610       --------->YAB1<---------ARR14(2)    --------->ICU4  ---------->DOF2   actttcattgttatctgaccagcaaaacataccaccaagaatcagttaggaagatacaacaataaaacgagagcataatgaaaatggtcagaaagagaga  14658300                                   --------->YAB1                          --------->MYB52(1)                                  <-------TEIL                            ------->GAMYB   ---------->DOF2                               --------->ATHB12                    <------ZmHOX2a(1)   ----------->RAV1(1)         <---------At4g35610  <---------YAB1           <-----------GT1   --------->MYB46(3) ----ID1 --------->At4g35610  --------->ICU4       ------>ZmHOX2a(1)     <---------MYB52(2)       ---   caaaaccagagagctcatgtactgaagaagtcatgattcatgagaagactgtcctagttacaagtctgaggaacaacaaactgaaacaacaacaaagcac  14658400                                       --------->ANAC46                                     <-----------GT1                                  --------->GLK1(1)                   --------->YAB1    --------->ANAC58                                  <---------GLK1(1)                  <---------ATHB12   --------->ANAC58            --------->ANAC58  --------->YAB1                       --------->WOX13(1) ---------->DOF2            --------->ANAC58--------->ARR14(2)             --------->YAB1         --------->GLK1(2) <          ---------->DOF2   --------->GLK1(2)--------->AtMYB61 --------->GLK1(1) <---------GLK1(2)  - ------->DOF2               <---------ARR14(2)      ----------------->AGL2  ------->GAMYB        ----   aaaagtcagtaccaaagccaagagtttgagaatcggaattcactaaaccaaaaccccaaaatcagaattcaatcacaaccctagaatctaaagcaaaccc  14658500                                                                           ----------->ARR10                                                                   <---------ARR14(2)                                                                 --------->LBD16                                                                --------->ANAC46                                                                <---------HSFB2a(2)                                                                --------->LBD16<-------TEIL                --------->YAB1                                  --------->HSFB2a(2)                --------->TOE1(3)                              <---------HSFB2a(2)        ---------->DOF2              ------>MYB46(1)                                  <---------LBD16--------->CCA1(2)  ----------->GT1     --------->TOE2(3)                        --------->HSFB2a(2)    ----------->RAV1(1) ---------ZAT14 --------->TOE2(3)                             <---------LBD16--------->ARR14(2) -------->ZAT14<---------ATHB12             <-------TEIL  <----------TaMYB80 <---------ARR14(2) ----->LBD16  ------>MYB83     --------->YAB1       ---------->DOF2--------->ARR14(2)<----------ID1   agaacagagaaaaaccaatcttaacctctactatcacatctcaacatacatagcaaaagcattttcccggaaacgagtagatacagaacaacaaaagcta  14658600                                                                                   ------>ZmHOX2a(2)                                                                                 <-----------ARR10                                                                                 <---------AGP1                     --------->ANAC58                                            --------->ARR11(3)                     --------->ANAC58                                            <---------ARR11(3)               <---------ANAC46                             <---------At4g35610  <---------ARR14(2)         --------->GLK1(2)--------->YAB1          --------->AHL20(2)             --------->ARR14(2)         --------->ARR14(2)            --------->TOE2(3)    <---------ZAT2   <---------LBD16         --------->ARR11(3)           ----------->RAV1(2)   --------->At4g35610 <---------CCA1(2)         <---------ARR11(3)--------->TOE2(2) <---------AHL20(2)         --------->WOX13(1)         <---------ARR14(2)--------->TOE1(2) --------->AHL20(2)     --------->WOX13(1)     --------->YAB1---------->DOF2  <-----------GT1<---------AHL20(2) <---------ATHB12             --   gaaactttcaaaatctggagggaaagaaacataagaatttacctgaattatataaaatagtaagctgattcaatcaatctctggatcttaccctcagaaa  14658700                                                                                             <-------                                                                                             <-------                                             --------->ICU4                                  <-------                                        --------->ANAC58                                    ---------       <---------ARR11(3)               --------->ANAC58                             --------->ANAC58       --------->ARR11(3)             --------->CCA1(2)                              --------->ANAC46      *TSS     <---------DAG2    <------ZmHOX2a(1)                                   --------->ANAC58   ---------->DOF2             <---------TOE2(3)              --------->MYB52(1)   <---------ALFIN1<- --------->GT1 <----------DOF2--------->MYB52(1)  --------->MYB52(1)    ----------------->AGL1 <-----   attgttaaaggtctctccttttttgttctaactaaggaagagacgaaatgactaacagaggcctaaacggctagacccaagagggacacaccatgtcgtt  14658800                                                                                     <---------At4g35610                                                                                     --------->At4g35610                                                                                   <---------WRKY38(1)                                                                                  <<<<<<<<<<WRKY6                                                                                  <<<<<<<<<<WRKY11                                                                                 <-----------HVH21   <---------At4g35610                                                          <------MYB46(1) ----- --ANAC58                                       <---------MYB52(1)              <------MYB83    ----- --ANAC46                                      <---------RAP2.6(3)          --------->ATHB12    ----- --ANAC58                                     <---------ANAC58             <---------ZAT6    -------- ->ID1                           --------->TOE2(3)                     <---------ZAT14     <---------ARR14(2) ----------GT1                 <-------TEIL   <---------ANAC46         --------->ZAT14     --------->ARR14(2) ----MYB52(1)       ------>ZmHOX2a(1)         <---------ANAC58     <---------ALFIN1<---------WRKY12   ttttcagttcatagcctccgtccttctctaatattcattaacatcgtgccgttttcatgttttccactcacactgtagtgataggtcaactcagaaccac  14658900                   --------->ANAC46                                                          <------ZmHOX2a(1)                   --------->ANAC58                                              ===================HOX2a_HOX2a                   --------->ANAC58                                --------->ALFIN1          ========         <------ZmHOX2a(1)                                       <---------O2    <------ZmHOX2a(2)    --------->ALFIN1                                             --------->O2  ------->GAMYB ======== ---->ANAC46     <---------DOF5.7(2)          ----------->GT1===========================HOX2a_HOX2a ---->ANAC58    <---------WRKY12        ---------->DOF2      <------ZmHOX2a(1)--------->MYB46(3) ---->ANAC58--------->ALFIN1       ----------->GT1          <----------ID1    <---------MYB52(2) ->MYB46(3) <---------ZAT6      ----------->RAV1(1)       --------->YAB1    --------->MYB52(1) ------   gaaaatgtgtaggagtggtaaacgacacgatgtgcaacagtgaaaaggaggctaatacaatgaggacaagtgtcgaaacaacgatcgagattgtaggaaa  14659000                   ------>NtERF2                <---------At4g35610                --------->At4g35610                --------->ZAT2         ------>ZmHOX2a(2)        <------ZmHOX2a(2)        --------->CCA1(2)       --------->AGP1                                                                        <-------       <---------AGP1                                                                        --------       <---------ARR14(2)                                                                   <--------       --------->ARR14(2)                                                                  <---------ARR11(3)       <---------ARR11(3)                                                                  --------->ARR11(3)       --------->ARR11(3)--------->ARR14(2)                ----------->RAV1(2)             <---------AHL20(1)      <---------CCA1(2)  <---------ARR14(2)                <---------AtLEC2     --------->WRKY12<----     ----------->ARR10--------->LBD16                      <---------ANAC58     --------->WRKY38(1) ===============HOX2a_HOX2a                    --------->ZAT18            <---------ZAT18 --------->AHL20(2) ==============HOX2a_HOX2a                   --------->ANAC46----------->HVH21 <---------MYB52(1)   < ---->DOF2   ---------->DOF2          <---------MYB46(3)   <---------ANAC58   <-------GAMYB--------->AHL20(1)   agacgggcagatctgaaaagctgcccgaatatgttatcgattgttcaactccactagttttgcctgaccctacttgtgcccgttgccctcaaatatatct  14659100                                                   <---------DAG2                                                   <----------DOF2                                              <---------MYB52(1)                                             <---------SPL7                                            <---------ANAC58                                         --------->GLK1(2)                                        <---------GLK1(2)                                        <---------ARR14(2)                        <---------DEAR3(2)  <---------ANAC58                                        < --ARR11(3)        --------->HSFC1(2)   --------->ARR14(2)                                 <---------AtMYB61 ->ARR11(3)        <---------HSFC1(2)  <---------HSFB2a(1)                               <----------DOF2 -CCA1(2)          <---------HSFB2a(1) --------->HSFB2a(1)                             --------->ZAT2 ------DOF2<---------YAB1              <---------HSFC1(2)                         <-----------GT1  <- -------GAMYB---------->DOF2           --------->HSFC1(2)                        ---------->DOF2   <-   ttcgttgtgagtcatcaaagaagcgtcggtatcgaaaccgaagattccgttcgcttttggttttgttcgaatttcagagacattaaaccagctttggtat  14659200  Previous    Next  AGI:  At2g34720.1    Description:  CCAAT-binding transcription factor (CBF-B/NF-YA) family protein. Identical to Nuclear transcription factor Y subunit A-4 (NFYA4) [Arabidopsis Thaliana] (GB:Q8VY64;GB:O64585); similar to CCAAT-binding transcription factor (CBF-B/NF-YA) family protein [Arabidopsis thaliana] (TAIR:AT1G30500.2); similar to YA6 [Antirrhinum majus] (GB:CAM12544.1); contains InterPro domain CCAAT-binding transcription factor, subunit B; (InterPro:IPR001289) Range:  from: 14656846    to: 14658706    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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