Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <----------DOF2                  <---------MYB52(1)                         --------->LBD16                 <-------GAMYB                           <---------ARR14(2)                <---------MYB46(3)                       ------>MYB83             <-----------HVH21                           --------->ARR14(2)             ------------>AtMYB77                       --------->WOX13(1)         --------->ZAT6                                --------->AtMYB61     <---------MYB52(2)                               --------->MYB46(3)    <---------At4g35610                              --------->ANAC58                               <    --------->At4g35610                            --------->MYB46(3)                      ---------- ---------DOF2  <---------DEAR3(2)        ------>ZmHOX2a(1)<---------LBD16             --------->AHL20(2) ----ANAC58 <-----------RAV1(1)           <----------DOF2------>MYB46(1)      <---------YAB1        < ----ANAC58<<<<<<<<<TAC1               ---------->ID1--------->ANAC58       <---------AHL20(2)    ---   tctttcagctaacactgtcggttaccttctacgattttttggtccttttgtgaacaaccaatccgcattaagcagtgtttatttttgaaaaaaatgtgaa  14635800                                                                --------->LBD16                                                               <---------HSFB2a(2)                     --------->ANAC58                          <---------LBD16 ---------ANAC58     --------->ANAC46                         <---------LBD16 ->GT1         --------->ANAC58  --------->DAG2             --------->GLK1(2)             <------ZmHOX2a(1) ---------ANAC58     --------->ANAC58               --------->ICU4                      <---------TOE1(3) ------>GLK1(2)--------->ANAC58 ---------->DOF2     <---------ATHB12    ---------->DOF2 <---------TOE2(3)   attcttgtgagtgaaacaagcagacgaaattgcagaaagtgagagtttttagcaatgaagaaattcggggaaaataaagtttcttcatttaaggaaataa  14635900                                         --------->ZAT14                                         <---------ZAT14                                       --------->ANAC46                             <---------ICU4                        --------->AHL20(2)                        <---------AHL20(2)                  ----------->GT1   <---------ZAT18                 --------->ANAC58   --------->ZAT14                                                 <             <------ZmHOX2a(1)      --------->ZAT18                             <---------At5g28300--   --------->YAB1--------->ANAC58   <---------ZAT14      ----------->GT1       <-----------GT1   <---   accaatagtaagacaggacaaggaaaataaatacttactgcactgaacaatgaagtaaccagtaaaatcaaaaacccattttcaccgtttcacaataact  14636000                          ------>NtERF2                        <---------LBD16                --------->DEAR3(1)                ----------->HVH21               <------NtERF2              <---------ATERF1(1)              ------>NtERF2             <---------LBD16             --------->LBD16         <---------ARR14(2)         --------->GLK1(2)--------->LBD16                                                  <---------At4g35610         --------->ARR14(2)                                                        <---------HSFB2a(2)        <---------GLK1(2)<---------RAP2.6(2)                                      ------>ZmHOX2a(2)    <---------ANAC46  --------->GLK1(2)                                          --------->CCA1(2)    <---------ANAC58  --------->ARR14(2)                                         <------ZmHOX2a(2)    <---------ANAC58  <---------ARR14(2)                                        <---------AGP1   <------NtERF2<---------DEAR3(1)                                              --------->AGP1  ------>NtERF2--------->RAP2.3(1)  --------->ARR11(3)                          <---------ARR14(2) --------->ALFIN1------>NtERF2<-------GAMYB                                     --------->ARR14(2) <---------DEAR3(1) --------->HSFB2a(1)                                         --------->ARR11(3) ---------MYB52(1)<------NtERF2<---------MYB52(1)                               <---------ARR11(3) ------->LBD16--------->LBD16<---------MYB46(3)                                <---------CCA1(2) ------LBD16<---------LBD16------>NtERF2----------->GT1                       ----------->ARR10     -   ccggtggcgagaatcccggcgacgattccggccgttgagaacttgttaaacagagcaatagaggctgaaacagagaaatgtagatctggatgaagcagag  14636100                 --------->ATHB12            --------->ZAT14            <---------ZAT14          --------->At4g35610          <---------At4g35610          --------->ZAT2          <---------ZAT2         ------->TEIL      --------->ANAC58      --------->ANAC58           <---------AtLEC2----------->GT1                                 <---      --------->ANAC46    <----------DOF2       --------->DAG2             ----------->GT1      ----- -------->AHL20(2) <---------WOX13(1)          ---------->DOF2  --------->AHL20(2) --------->At4g35610   aataaaaaacgcagctcactgattgaagcttttttgaatggaatcgaacaaaagtgaaaacgacgattaaaaattgagggaaaatagctggagagagaga  14636200                                                                 ----------->GT1             <----------ID1       <---------ZAT6            --------->ALFIN1             ----------->GT1    ----------->GT1   <---------ANAC46           ---------->DOF2  <------ZmHOX2a(1)    <---------At4g35610    <---------YAB1        *TSS ------------------------>ANAC81     <---------LBD16 <---------ANAC46     ---------->DOF2      --------->ANAC58       --------->At4g35610   <---------AHL20(1) <---------ALFIN1  <------NtERF2           --------->ANAC58    <---------ZAT14<-------GAMYB                --------->ANAC46 --------RAV1(1)     --------->DAG2           --------->REM1(2)<---------ANAC46         <-----------GT1 ---->ARR11(3)      ---------->DOF2          --------->ALFIN1<---------ZAT14 <-----------GT1---------   tgttggcgaaagaaaaagaaaaaaaagtaaggaacagtgtaaacagtgtgtagcggaagagtgtgttgtgtaatatgtttaacccaaaatatacacccct  14636300                                                   --------->ANAC58                                                   --------->ANAC58                                                  --------------->AtSPL8                    <-----------GT1               <---------------AtSPL8  --------->TOE1(2)              <---------TOE2(3)                --------->AtLEC2           --------->TOE2(2)            <---------AHL20(2)                 --------->ANAC58          --------->YAB1        --------->AHL20(2)                     --------->ANAC58 --------->AHL20(2) --------->ETT(1)      --------->TOE2(3)                        --------->ANAC46 <---------AHL20(2) <---------ANAC46      <----------DOF2 <-----------GT1  <---------TOE2(3)<---------MYB59 <---------YAB1<---------ARR14(2) >ANAC46<---------AHL20(2)            ---------->DOF2 ------->TEIL    --------->YAB1  --------->ARR14(2)   atattatactttaatttatgtttttcaccctcttattttttaaagttccatgcaagtaccttacatttaaaattatcatgcgatgtcggaaactcaattt  14636400                            ------------>MYB.PH3(1)                       ----------->GT1                                                         ------                       --------->YAB1                                                       ---------                      <---------YAB1                                                      -----------                      ----------->GT1 ---------->DOF2          -------->HAHB4            --------->DAG2               --------->At5g28300  <---------YAB1             --------->YAB1         --------->YAB1              ----------->GT1   --------->At5g28300           <---------YAB1         <---------YAB1 -              --------->LBD16  ----------->GT1         <---------ANAC46 <---------ZAT14 ---------->DOF2            <---------LBD16 --------->MYB52(1)     <-------GAMYB <---------YAB1    --------->YAB1   <   tgtttctaagtttacccggtgaaaatgataaaacggttataaaagtatgagacagttgtggataattatagtagtatagggactataatgaaaagtaatt  14636500                                                                                                  ---                                   <---------AHL20(1)                                             <-- --------->LBD16                   <---------AHL20(2)                                            <--- --->ICU4                          --------->AHL20(2)                                           ----- >AHL20(2)     <------ZmHOX2a(1)   --------->AHL20(1)                                          <----- >GT1  ---------->DOF2    ---------->DOF2                                                     <------ -------->HSFB2a(2)    <---------YAB1        --------->GLK1(2)                          <---------AHL20(2) ---------HSFB2a(2) <---------YAB1--------->AHL20(2)           ---------->DOF2         --------->AHL20(2)   atccagaagaaaagagaggaacattataaaaagagaataaattagagaatttgatggtgagagagaaaagtttgaaaatttagagaattttaaattggcg  14636600                                                                            --------->YAB1                                                                            --------->TOE2(3)                                                                          ------>MYB83                                                                          ------>MYB46(1)                                                                         --------->MYB52(1)      ---------->DOF2                                                   --------->TOE2(2)     ---------->DOF2                                                    ------->GAMYB  --------->TOE1(3)                                                     --------->TOE1(2)  --------->TOE2(3)                                                    <---------MYB52(2) ------>ARR14(2)                                                       --------->MYB46(3) -------ARR14(2)                                                     <-----------GT1            ----- ---NtERF2                                                      --------->AHL20(2)             ------ ---->LBD16  <---------ZAT6                                     <---------AHL20(2)       --------->ZAT18 ----ANAC46  ----------->GT1                                   <---------AHL20(2)        --------->At4g35610 ---LBD16   <------NtERF2  --------->ALFIN1                 <---------AHL20(2) --------->AHL20(2)   gaaaccgtaaaggcagagttaaatggcaagtggacgtttttcgaaaactgatgaaattgtttttatttatttaaccaacgataaaatgatgtgctcaaaa  14636700  Previous    Next  AGI:  At2g34680.1    Description:  AIR9 (Auxin-Induced in Root cultures 9); protein binding. similar to protein binding [Arabidopsis thaliana] (TAIR:AT1G78230.1); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT4G03260.2); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT4G03260.1); similar to hypothetical protein OsI_024008 [Oryza sativa (indica cultivar-group)] (GB:EAZ02776.1); similar to putative leucine rich repeat protein [Oryza sativa (japonica cultivar-group)] (GB:BAD30535.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40410.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 14623701    to: 14636208    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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