Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <xxxxxxxxxxxxxxxxsmallRNA(i)                   --------->MYB52(2)                 <xxxxxxxxxxxxxxxxsmallRNA(i)                 <xxxxxxxxxxxxxxxxsmallRNA(s)                 <---------MYB52(1)                <xxxxxxxxxxxxxxxxsmallRNA(s)                <xxxxxxxxxxxxxxxxsmallRNA(i)             <------ZmHOX2a(1)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           <xxxxxxxxxxxxxxxxsmallRNA(s)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          <xxxxxxxxxxxxxxxxsmallRNA(s)          <xxxxxxxxxxxxxxxxsmallRNA(i)          xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <xxxxxxxxxxxxxxxxsmallRNA(s)         xxxxxxxxxxxxxxxx>smallRNA(s)        <xxxxxxxxxxxxxxxxsmallRNA(s)        xxxxxxxxxxxxxxxx>smallRNA(s)        <xxxxxxxxxxxxxxxxsmallRNA(i)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)        xxxxxxxxxxxxxxxx>smallRNA(i)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <xxxxxxxxxxxxxxxxsmallRNA(s)       <xxxxxxxxxxxxxxxxsmallRNA(i)       xxxxxxxxxxxxxxxx>smallRNA(s)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxsmallRNA(i)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxsmallRNA(s)      xxxxxxxxxxxxxxxx>smallRNA(s)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxsmallRNA(le3)      xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     xxxxxxxxxxxxxxxx>smallRNA(s)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     <xxxxxxxxxxxxxxxxsmallRNA(s)     xxxxxxxxxxxxxxxx>smallRNA(i)     <xxxxxxxxxxxxxxxxsmallRNA(i)     xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     xxxxxxxxxxxxxxxxxxx>smallRNA(si3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->ALFIN1       --------->ICU4     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    <xxxxxxxxxxxxxxxxsmallRNA(s)    xxxxxxxxxxxxxxxx>smallRNA(i)    xxxxxxxxxxxxxxxx>smallRNA(s)    <xxxxxxxxxxxxxxxxsmallRNA(i)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)   <xxxxxxxxxxxxxxxxsmallRNA(s)   xxxxxxxxxxxxxxxx>smallRNA(s)   <xxxxxxxxxxxxxxxxsmallRNA(i)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  xxxxxxxxxxxxxxx>smallRNA(le3) --------->YAB1                                                      -  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                              <  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                      --------->AHL20(2)                       <  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)               --------->AHL20(2)                            -  xxxxxxxxxxxxxxxx>smallRNA(s) <---------ATHB12       <---------AHL20(2)                          <--  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           --------->AHL20(2)                            -----  xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             <---------AHL20(2)   <---------AHL20(2)      ------  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <---------AHL20(2)     <---------AHL20(2)       <-----  xxxxxxxxxxxxxxxx>smallRNA(i) --------->ICU4  --------->AHL20(2)     --------->AHL20(2)       ------  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        --------->AHL20(1)    <---------AHL20(2)       -------  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        --------->AHL20(2)  --------->AHL20(1)         <-------  <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)           <---------AHL20(2)  <---------AHL20(1)  xxxxxxxxxxxxxxx  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->AHL20(2) --------->AHL20(2)   xxxxxxxxxxxxxxxx>smallRNA(s) ------>ETT(2) ----------->GT1 <---------YAB1<---------AHL20(1)  <---------AHL20(2) xxxxxxxxxxxxxxxx>smallRNA(s)   tggacgggtttggcaggacgttacttagtaacaatgataaactataaaataatttataaatttttatatatattaattttaaaaaatgaattgtctccgc  14579800       --------->LBD16      <xxxxxxxxxxxxxxxxsmallRNA(s)     <---------LBD16     --------->LBD16    --------->DEAR3(1)   --------->ANAC46  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------ALFIN1 -------->ZAT14 ---------ZAT14 -------TEIL                                                       --------->YAB1 -------->SPL7                                                     <--------ATHB1 -------SPL7                                                      <---------ATHB51 ---->ANAC46                                                  <---------------------WRI1 >NtERF2                                                     ----------->GT1 ----LBD16     --------->ARR11(3)       <---------ZAT18  <---------YAB1                    <---------DAG2 --->LBD16  <---------AHL20(2)          --------->ZAT18  <---------TOE2(3)    <---------AHL20(2) ----------->SPL14         <---------TOE2(3)      --------->ANAC55(2)        <---------AHL20(2) --LBD16    --------->AHL20(2)  <---------AHL20(2)----------->GT1 <---------ATHB12     -------------- x>smallRNA(s) --------->GLK1(2)--------->AHL20(2)<---------ANAC55(2)        --------->AHL20(2)   ggtacaccgcggattaaaatctagtagttaacatttttttagttcgcttgaaacgtattaagatggcaataataccaaaataaatggaatccaatttttg  14579900                                                          --------->ZAT14                --------->ATHB12                                                          --------->ZAT18                --------->YAB1                                                          <---------ZAT14         ---------->DOF2                          --------->YAB1    --------->At4g35610               ------->GAMYB                         <---------YAB1  <---------At4g35610               <-----------GT1    <------ZmHOX2a(1) --->AGL3   ----------->GT1              <-----------------AGL1   <---------AHL20(2)    <---------YAB1   aaaatttcacaaacaggtttatcgtttatgataaatctatgttatctgatgaggcacgagtccagtattttatctaataaccccaaaagaattataggat  14580000                                                                                --------->REM1(2)                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                          ------->MYC2                                                                          <-------PIF4                                                                          <-------MYC4                                                                          ------->MYC4                                                                          ------->PIF5                                                                          <-------PIF5                                                                          ------->PIF4                                                                          ------->MYC3                                                                          <-------MYC2                                                                          <-------MYC3                                                                         --------->TGA1a                                                                         --------->O2                                                                         <---------O2                                                                         <---------TGA1a                                                                         ========================bZIP_DOF                                                                        ------------>OsbHLH66                                                                       <------------OsbHLH66                                                             --------->DAG2 <-------TEIL                  --------->AHL20(2)                        ---------->DOF2--------->ALFIN1                  <---------AHL20(1)    ---------->DOF2     =======================bZIP_DOF           ----------->GT1              ===========================================bZIP_DOF   <----------DOF2<---------AHL20(2) --------->YAB1 --------->YAB1   <-----------GT1  ---------->DOF2   gaattctttaaaaatgttattttattttttgtattacaatgaaaaagaaaacaaaaatcacaaaaagcattttacacgtgcgtgaagagaaagaaacaga  14580100                                                                  <-----------ARR10                --                                                                  <---------ARR11(3)             ----                                                                 <---------CCA1(2)               ----                                        <----------DOF2         ============================HOX2a_HOX2a                                      <---------At4g35610       ------>ZmHOX2a(1)                ----                                      <---------ZAT2    <-----------GT1                    <---------ALFIN1                                     ------>NtERF2  <----------DOF2         <---------CCA1(2)   <----                                XXXXXXXXXXXXXXXXXXXX>MIR773B   --------->TOE2(3)         ----------->RAV1(1)                                XXXXXXXXXXXXXXXXXXXX>MIR773*TSS--------->TOE1(3)     <------ZmHOX2a(2)   gatgtcaagttgtgttctgtccaaactctgttctaatgccagcttttgtctcgtcttttctctatccttatcttccctctatcttcgatcccaacacata  14580200                                                          --------->YAB1                                                          <---------ICU4                                                         <---------YAB1                                                       <---------ICU4                                                       --------->YAB1                                                      <---------YAB1                                                    --------->YAB1                                 ----------->HVH21  <---------ICU4                                <---------WOX13(1) <---------YAB1        --------->ANAC58      --------->MYB52(1)  <---------ARR11(3)    --------->ANAC46         ------->GAMYB        --------->ARR11(3)    --------->ANAC58         ----------->HVH21   --------->YAB1    --------->ANAC58       <---------At4g35610  <---------YAB1 ------->ANAC46            --------->At4g35610  --------->ICU4                 <----------DOF2 ----->ANAC58         --------->WOX13(1)      <---------ICU4               --------->ANAC58 ----->ANAC58       <---------AHL20(2)        --------->YAB1               --------->ANAC58 ----->ANAC46       --------->AHL20(2)       --------->ICU4           <----------ID1             ---- ---TEIL--------->ANAC58  --------->MYB52(1) <---------ATHB12      --------->TOE1(2)        ---------   cacaacacgcacacacacatatataaatcaactgactgacacatacaatcatgatcatcatcatcaaaaactgcgacaagcctttactcaatttcaaaga  14580300      <-------TEIL     --------->AtLEC2<---------ANAC46   <---------At4g35610                                                                          <----   --------->At4g35610                                      --------->GLK1(1)           <----------DOF2 <---------------------WRI1                                 <---------GLK1(1)     <----------DOF2 --- ----->CCA1(2)---------->DOF2                      <---------YAB1          --------->ANAC58    ------ ->DOF2    --------->YAB1              <-----------GT1   <---------YAB1    --------->ANAC58  <-------   gatggagatgcaaacaaaatgcgacttggaacttcgccttcttacttcttcttatgattctgatttccatagctcgtaagccttctttctctttcaacgt  14580400                                                                                         <---------At4g35610                                                                                     --------->ANAC58                                                                                     --------->ANAC46             --------->AHL20(2)                                                      --------->ANAC58         <---------AHL20(2)                                                       <---------ATHB12      ----------->GT1                                                      <------MYB46(1) -----MYB52(1)     --------->ICU4                                          <------MYB83  --------->ZAT2 ------>MYB52(2)<---------YAB1                                           <--------P --------->WOX13(1) --->TOE2(3) <---------AHL20(2)                         <---------YAB1<---------TOE1(3)  --------->At4g35610 --TOE2(3)  --------->AHL20(2)<---------ZAT6       <----------DOF2    <---------TOE2(3)  <---------ZAT2   tatttgtttagtaaatttataaatatgaattagagtcaaacgatactgatatacttttatcaatggtttttgaaggttggacgaatcaagcagctctgaa  14580500                                                     <-------MYC3                                                     ------->MYC3                                                    <---------TGA1a                 --------->GLK1(2)                  --------->TGA1a              --------->ANAC58                     <-------MYC3        <-----------GT1              --------->ANAC58                     <-------MYC2     <------ZmHOX2a(2)          --------->ANAC58             --------------->AGL15       <---------ARR14(2)          --------->ANAC58             --------->HSFB2a(2)         --------->ARR14(2)        ---------->DOF2                <---------HSFB2a(2)         <-----------ARR10       ------->GAMYB         <-----------GT1       ------->MYC3    <---------ARR11(3)        --------       --------->AtMYB61     <<<<<<<<<GT-1         ------->MYC2    --------->ARR11(3)    --------->ANAC58      --------->MYB46(3) <---------RVE1(1)         <-------MYC4    --------->AGP1        --------->ANAC58     --------->ANAC58   --------->ARR11(3)   =================MYC_MYB------>ZmHOX2a(2)   --------->ZAT6     --------->ANAC58   <---------ARR11(3)   ------->GAMYB         <---------AGP1      --------->MYB52(1) <-----------GT1<---------GLK1(2)      <---------------AGL15      <---------CCA1(2)    <---------DOF5.7(2)   atttcacaaccaaagcaagaatctcagatattaaccattttctacaacgggcacatgtgtgtttcttcagatcttacccatcttgaggctaacgctatac  14580600                                                                   ----------->RAV1(1)                                                                ------>ZmHOX2a(1)                                                              ------>ZmHOX2a(2)                                                             <------ZmHOX2a(2)                                                            <---------ARR14(2)                                                            --------->ARR14(2)                               <----------DOF2              <---------GLK1(2)                            --------->ARR11(3)        <---------SPL7 --------->MYB46(3)                  --------->ALFIN1 <---------YAB1    <---------HSFB2a(1)      <---------ANAC46      <---------ARR11(3)       <---------HSFC1(2)                             <     <---------STY1(2)     --------->GLK1(1)         <---------DEAR3(2)                          ---- ->ZAT14 --------->REM1(2) <---------GLK1(1)         --------->HSFC1(2)                    >>>>>>>>>>GATA-1   tatcgctagcgagtagagatgtggaagagaaatctttatccttgagaagttcagacggttcggatcctccaacaatcccaaacaattcgactcgatttca  14580700  Previous    Next  AGI:  At2g34600.1    Description:  JAZ7/TIFY5B (JASMONATE-ZIM-DOMAIN PROTEIN 7). Identical to Protein TIFY 5B (TIFY 5B) [Arabidopsis Thaliana] (GB:O64687); similar to JAZ8/TIFY5A (JASMONATE-ZIM-DOMAIN PROTEIN 8) [Arabidopsis thaliana] (TAIR:AT1G30135.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62787.1); contains InterPro domain ZIM (InterPro:IPR010399) Range:  from: 14580159    to: 14580935    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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