Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <-----------GT1        --------->AHL20(2)        <---------AHL20(2)        <---------ICU4    <---------AHL20(2)    --------->AHL20(2)                           <---------CCA1(2)   --------->AHL20(2)                          <---------ICU4 -------->AHL20(2)    <---------AHL20(2)    --------->YAB1 ---------AHL20(2)    <---------YAB1        <---------ICU4          <---------ICU4               <--- -----AHL20(2)     <----------DOF2         --------->ICU4           --------->ATHB12           ------ ---->AHL20(2)   ------>ZmHOX2a(1)         <---------YAB1           -------->ATHB1             <----- ---->AGL15<-----------GT1           <---------ZAT6                <---------YAB1 <---------ALFIN1 --   atttatttaattttttctcctctttttattgtttatgtagtggtgatcatcatctcttgaagttttagaatcattgatgcatcaccactcgaattcaaat  14563700                                          --------->ATHB12                                   --------->AHL20(2)                                   <---------AHL20(2)                                  <---------AHL20(2)                                  <---------AHL20(1)                                           ------                          --------->GLK1(1) <---------GLK1(1)                         --------->AHL20(2)                        --------->YAB1   <---------YAB1                              --------->AHL20(2) ------LBD16<---------YAB1<---------GLK1(1) --------->GLK1(1)                    --------->AHL20(2) --->ARR14(2)          <---------YAB1  --------->YAB1           <---------ICU4 --------->TOE2(3) ----ARR14(2)      <---------GLK1(2) <---------YAB1       --------->TOE2(3)  >>>>>>>>>MYB98   <------ ------->LBD16  --------->YAB1    --------->AHL20(2)--------->AHL20(2)   ----------->GT1  --------->AHL20(2)   ccgcataagacaatattatcagattatgatatccaaattatttatgatttccaaataaaaacttaataatgtatggagtaacataaaataaaaaaaatga  14563800                                     ------>NtERF2                                     <---------At4g35610                                    --------->DEAR3(1)                                    <---------ATERF1(1)                                  --------->LBD16                                  --------->At4g35610                                  <---------At4g35610                      <---------AHL20(2)                     --------->AHL20(2)                                               --------->ZAT14                     <---------AHL20(1)                          ----------->GT1    --------->ANAC46                     --------->AHL20(1)                    --------->AHL20(2)     <-----------GT1                     <---------AHL20(2)                --------->AHL20(2)      --------->AHL20(1)   <---------ICU4    --------->ARR11(3)              <---------ANAC55(2)       --------->ARR11(3)   --------->YAB1    <---------ARR11(3)      <---------GLK1(2)---------->DOF2  <---------ARR11(3) --->ATHB12   ---------->DOF2    --------->ANAC46    --------->ANAC55(2)      --------->AHL20(2)    - ---YAB1    <---------ATHB12    <---------LBD16      ----------->GT1    ----------->GT1       <------   tagaatcataactaatcaaagaatatatttgttttccgcagcccctagatttgttaagtaaataaaaaggaaattagaaaatatatactaaactctgttt  14563900                                                                                              <------                                                                                             <-------                                ------>MYB83                                                 --------                   <---------AHL20(1)                                                        <-------                   --------->AHL20(1)                                                      --------->YAB1                  --------->AHL20(2)  --------->AHL20(2)                                 --------->AHL20(2)            --------->ANAC58    ------>MYB46(1)                                 --------------->AGL15          ---------->DOF2     <---------MYB46(2)                                <---------------AGL15   --------->AHL20(2)--------->AHL20(2)                                         ===================== --------------->AGL15        <---------MYB59                                  ----------------->AGL1 <---------------AGL15     <-----------GT1    --------->GLK1(1)               <---------At5g28300---- ===============================================================================================MADS_MADS ---------------->AGL2<---------AHL20(2) ---------->DOF2      --------->HSFB2a(2)    ----------->GT1- ---MYB52(1)--------->ANAC58 --------->ANAC46 <---------GLK1(1)              <-----------GT1 --------   gtccaaaaaatagaaagcaaatatataatataccaaacaaataaaaagaaatcccattacatttccagtatataggcatttaccatatagaaaaaataat  14564000      <---------------AGL15      --------------->AGL15     ----------------->AGL3     ----------------->AGL2            <-----------GT1 <---------KAN4(2)                     <---------ARR14(2) ---ICU4                               --------->ARR11(3) --AHL20(2)                            --------->ARR14(2)            --------->ANAC46 ->ICU4                              <---------ARR11(3)              --------->ANAC58 --ATHB51                            --------->ARR11(3)              --------->ANAC58 =====================MADS_MADS   --------->AHL20(2)                --------->TOE1(2) ----->YAB1                 ----------->GT1        ------------>CBF*TSS -------->YAB1          --------->AHL20(2) ------>ZmHOX2a(1)  --------->ANAC46       <---------ZAT6 ->AHL20(2)       --------->AHL20(2) <---------AHL20(1)   ----------->RAV1(1) --------->AHL20(2)    <   tagaataaccaaaaacagaattaaaaaaaaatgtgataatatatcctcttccatacaatacaacacagaacaagcgactataaattagtgctaagaaaac  14564100                                 <----------DOF2          ------>MYB83          --------->YAB1                                             <---------At5g28300          ------>MYB46(1)       <---------ICU4           ---------->DOF2               <---------ZAT6     <-----------GT1        --------->MYB46(3) --------->ARR11(3)              --------->YAB1    ---- <----------DOF2     <----------DOF2       ---------->DOF2     --------->AtMYB61 <---------YAB1  ---- ---------DAG2<-----------GT1 --------->GLK1(2)<---------ARR11(3)---------->DOF2--------->At5g28300   acccttttcaccaaattcactctcttttcaacaatctttatttttcaaagttcttgtttaaaagaccaaaagagtagaccatggtaattgtgttacagcc  14564200                                                                                  --------->At4g35610                                                                                  <---------At4g35610                                                                                <-----------RAV1(2)                                                                             ------>MYB46(1)                                                                             ------>MYB83                      --------->YAB1          --------->SPL7               ------->GAMYB      <---------YAB1  --------->TOE2(3)     <-----------HVH21             --------->DEAR3(2)        < ----->ANAC58   --------->TOE2(3)           <---------SPL7                --------->MYB46(3)     <--- ----->ANAC58 -------->P        ---------->DOF2 ----------->GT1         --------->MYB52(1)       ----   agccagttttgatagcaacctctatgttaatccaaaatgcaaaccgcgtccggttttaatccctgttatagacttaaccgactcagatgccaaaacccaa  14564300                                                             <----------DOF2                                                            ------>ZmHOX2a(2)                                                          --------->ARR14(2)                                                   <---------ETT(1)                                                   ----------->HVH21                                                  --------->SPL7                                                <---------SPL7          <-------MYC3                          <-----------HVH21          ------->MYC3                         <---------ANAC58    --------->ANAC58                     <---------ATHB12 <---------ARR14(2)    --------->ANAC58                     --------->MYB46(3)<------ZmHOX2a(2)       --------->ANAC58 -----------HVH21                       -------->P--------->DEAR3(2)   --------->At4g35610          < ------ARR14(2)                       --------->MYB46(3)  <---------ARR11(3)       --------->ANAC58 < ----->ARR14(2)               ---------->DOF2  <---------ANAC58      <-----------RAV1(2)        <----   atcgtcaaggcatgtgaagagtttgggttcttcaaagtcatcaaccatggggtccgacccgatcttttgactcagttggagcaagaagccatcaacttct  14564400                                     ----------->HVH21                                    <---------MYB111(1)                                   ----------->RAV1(2)                                   <---------At4g35610                                   --------->ANAC46                                   --------->O2<---------MYB46(3)                                   --------->At4g35610                                   --------->ZAT2                               --------->TCP16(2)                              <---------PCF5   <------MYB83                              <---------PCF2   <------MYB46(1)                              <---------TCP20<---------MYB55(1)              --------->YAB1                              --------->ARR14(2)                        --------->MYB46(3)                              <---------TCP16(1)            ---------->DOF2 <---------ATHB12       <-     <---------AtLEC2         <---------ARR14(2)    --------->ANAC55(2)--------->ANAC58     <-------- <----------DOF2              <---------TCP11(2)    --------------->AtSPL3--------->MYB52(1)<-------- ---------ANAC58              --------->PCF2<---------MYB52(1)  --------->ATHB12            <-------- ---------ANAC58       ---------->DOF2  ----------------->AGL1  <------ZmHOX2a(1)       <---------ANAC58 ------DOF2      ---------->DOF2 <---------ALFIN1   <---------ANAC55(2)--------->ANAC58 <---------ANAC58   ttgctttgcatcactctctcaaagacaaagcgggtccacctgacccgtttggttacggtactaaaaggattggacccaatggtgaccttggctggcttga  14564500                                                        --------->LBD16                                                        ------>NtERF2                                                       <---------HSFB2a(2)                                                       --------->ANAC46                                                       --------->HSFB2a(2)                                                       <---------ETT(1)                                                       <---------ATERF1(2)                                              ------>NtERF2                                             --------->ANAC46 --------->ANAC58                                             ------->GAMYB  --------->ANAC58                                             --------->DREB2C(2)                                             --------->RAP2.6(2)                                 <---       --------->TOE2(3)                     --------->DEAR3(1) ----------->RAV1(2)              ---- --------->KAN4(2) <---------ICU4           --------->MYB46(3)--------->ANAC58          --------->YAB1 ------TEIL      --------->GLK1(2)        --------->AtMYB61 <---------ALFIN1          -------->P ---- -ANAC58     --------->YAB1         --------->ANAC46  <---------LBD16                ------->GAMYB -ANAC58  ---------->DOF2<---------ANAC58 <---------ALFIN1<---------ALFIN1          --------->MYB46(3) -ANAC46------>ZmHOX2a(1)<---------ANAC58--------->MYB46(3) --------->ANAC58<---------TOE1(3)  ------   gtacattctccttaatgctaatctttgccttgagtctcacaaaaccaccgccattttccggcacacccctgcaattttcaggtataacaaccatatcaac  14564600  Previous    Next  AGI:  At2g34555.1    Description:  ATGA2OX3 (GIBBERELLIN 2-OXIDASE 3); gibberellin 2-beta-dioxygenase. Identical to Gibberellin 2-beta-dioxygenase 3 (GA2OX3) [Arabidopsis Thaliana] (GB:O64692); similar to ATGA2OX2, gibberellin 2-beta-dioxygenase [Arabidopsis thaliana] (TAIR:AT1G30040.1); similar to gibberellin 2-oxidase [Vigna angularis] (GB:BAD99507.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283) Range:  from: 14564067    to: 14565776    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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