Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->At4g35610                                           <---------At4g35610        --------->At4g35610                                           --------->At4g35610        <---------At4g35610                                           --------->ZAT2            <-----------RAV1(1)                                           <---------ZAT2           <------------AtMYB77                                          ----------->RAV1(1)       --------->MYB46(3)                                 ----------->RAV1(1)               <---------At4g35610                                ----------->HVH21               <-------TEIL                              --------->ANAC58             ======================RAV       ---------->DOF2        --------->ANAC46             <-----------RAV1(2) --------DOF2                 --------->ANAC58        <------ZmHOX2a(1)  <---------At4g35610--------- ----DOF2          <---------TOE2(3)      =============================RAV            <<<<<<<<<MYB2   ctttctccataaaccacgatttatgtagttccaagcgacatatgcagcagcaaggaggaatacaggtgcaactgctgctccatacttggttttcatgcta  14557300                                                                                                <----                                                                                               ------                                                                                               >>>>>>                                                                                               ------                                                                                               >>>>>>                                                                                               >>>>>>                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                  <----------DOF2                               <---------MYB59                         --------->HSFB2a(2)     ------                               --------->TOE2(3)                       <---------HSFB2a(2)    <------                              ----------------->AG                     --------->HSFC1(1)     <------                        *TSS -------->P               <---------AHL20(2)--------->ANAC46      <------                       <---------ARR14(2)         --------->ATHB12     <---------HSFC1(1) -----------                       --------->ARR14(2)        --------->ICU4     ------>ZmHOX2a(1)    --------->ANAC46 >AtLEC2         <-----------GT1          <------------CBF     <-----------GT1<----------DOF2 -------   aacttgttcttggactgattcaccatatacttacctaaattatctattggaatgatttttttttttaatccttctcgaaactttcttttatacacaataa  14557400 <------------CBF --------CBF --->YAB1 >>>>AGL22 -->ATHB1 >>>>AGL20 >>>>AGL24 ---ATHB1 ----ICU4 --->ATHB51 --->ATHB12 ---YAB1                                --------->TOE2(3)        ----------->GT1 ---ATHB51                             <---------ZAT6       ---------->DOF2           <------ZmHOX2a(1) ---ATHB12                    <---------ARR11(3)        <---------TOE2(2)   <----------DOF2 ->CBF            ---------->DOF2     <---------TOE2(3) <---------TOE1(2)   --------->TOE2(3) -->ICU4      --------->At4g35610<---------YAB1      --------->ATHB12   <---------AHL20(1)   ttggattgcaaatggaagatgaaagcattcaagttattctaatgttagtcttgcatcataggtaaagaagttaatatactttaatagaggagacacattg  14557500                                 <---------ANAC55(2) --------->ARR14(2)                                 --------->ANAC55(2) <---------ARR14(2)                    ---------->DOF2         ---------->DOF2                   --------->AtLEC2           ----------------->AGL1----------->GT1    <------ZmHOX2a(1) <---------MYB52(1)       --------->KAN4(2)     <-----------HVH21  ---------->DOF2     <---------ZAT6              <----   aacaaagaatatttccaatagagaaagcatttgtcatgtaattcgaaaaagaaaggataccaaaacagtactgtttgtttatgcaaaacatttgatgcct  14557600                                                    <---------ALFIN1                                                  <---------ALFIN1                                                  --------->ANAC46                                         <----------DOF2                         ----------->GT1<---------ANAC58                               ----------->GT1 ------DOF2    <----------DOF2          <---------ANAC58  ---------->DOF2   <------------CBF        -   ttttcaaattgaagtttcttttgtctgaagtaacaaattgatgctttccttcacacacctaaaagtctaaaactctcaaattgtctatggggaaactaaa  14557700                               --------->AtMYB61                              --------->MYB46(3)                              ------------>CBF                     ---------->DOF2*TSS--------->YAB1          ------>MYB83       -------->P --------->AHL20(2)          ----------->GT1          ------>MYB46(1)   --------->WOX13(1)                    <------ZmHOX2a(1)        --------->AtMYB61 <------ZmHOX2a(2)         <---------AHL20(2)       ------------>CBF  <---------ARR11(3)         --------->AHL20(1)        <---------ANAC46       --------->MYB46(3)--------->ARR11(3)         --------->AHL20(2)        <---------ANAC58 -------->AHL20(2)--------->ZAT6   ------------>CBF--------->AHL20(2)         <---------ANAC58   aatttaagaaccaatccctaacacaaagatcaaccaatgcaataaaaatccaattttattaactcataggaagaaaaatggcttctacatttcttcaagg  14557800                                                                                                    <                                 <-----------GT1    -------->P                                      <                       <---------CCA1(2)            ------>MYB83                       --------->ANAC46                     <---------DAG2                 ------>MYB46(1)       <---------AHL20(1)        <                     <----------DOF2              --------->AtMYB61       --------->ARR11(3)      <--                    --------->TOE2(3)    <---------ALFIN1                 --------->AHL20(1) <-------   ccatactcaaaaactcacccttcctttatctcatttcacttccacacataaaccaactcttagattccaaaacatatatattggtttcccctccaatgga  14557900                                        <------NtERF2                                      --------->RAP2.6(2)        <------NtERF2                 <---------ETT(2)       ------>NtERF2                  --------->ETT(2)      --------->RAP2.6(2)           <-----------HVH21      --------->RAP2.3(3)        <---------At5g28300      --------->DEAR3(1)        --------->YAB1      --------->RAP2.3(2)     ------>MYB46(1)     --------->RAP2.3(1)      ------>MYB83                                        --------->WOX13(1) ---------->DOF2        <------ZmHOX2a(2)                                      --------->ANAC58 ---------WRKY12       --------->ARR11(3)                  --------->ICU4      --------->ANAC58 ---------WRKY38(1)   <---------At4g35610                  <---------YAB1    ---------->DOF2 ---------WRKY45      --------->At4g35610    <---------ATHB12<---------GLK1(2)--------->DAG2 ---------HVH21  --------->YAB1<---------ATHB12          --------->YAB1 --------->YAB1 --ATHB12  <---------MYB52(1)--------->WOX13(1)         --------->ICU4 <---------YAB1          ------   ggtcaaagccgccgtttgatcatcagatcaccaatcacggtcgccaaatcaaacagcaagaatgattctcacgatgataaaaagcaattaaggccattga  14558000            --------->ATERF1(1)           --------->At4g35610           --------->HSFC1(2)           <---------At4g35610                                                        --------->ZAT2        <------NtERF2                                                                 --------->ATERF1(1)       <---------MYB46(3)                                                             <---------ATERF1(1)       ------>NtERF2                                                                  <---------At4g35610      <---------ANAC46                                                                <------NtERF2     <------NtERF2                                                                    --------->At4g35610     --------->ATERF1(1)                                                              <---------ZAT2     <---------LBD16                                                                 <---------ATERF1(1)    <---------ORA47(2)                                                              <-----------RAV1(2)    <---------RAP2.3(1)                                                            <------NtERF2    <---------ATERF1(1)                                                           <---------ATERF1(1)    <---------DEAR4(2)                                                            ------>NtERF2    <---------RAP2.6(1)                                                           <-----------HVH21    <---------ERF1                                                               <------NtERF2    <---------RRTF1(1)                                                           <---------DEAR3(1)    ------>NtERF2                                                               --------->At4g35610   <---------RRTF1(3)                     <---------YAB1                        <---------At4g35610   <---------RAP2.3(2)                   --------->ARR11(3)                     --------->LBD16   <---------RRTF1(2)                    --------->GLK1(2)                      <---------LBD16   --------->ATERF1(2)          ------>NtERF2                               <-----------RAV1(1)   <---------RAP2.6(2)     <---------ANAC58                                 ====================RAV   <---------RAP2.3(3)     <---------ANAC58           <---------TOE2(3)  <---------ALFIN1           <   <---------ATERF1(2)    <---------STY1(2)           <---------TOE1(3) --------->ZAT14            <-   <---------ANAC46       --------->ZAT2 <---------ARR11(3)   --------->AHL20(2)------>NtERF2<-------   <---------DEAR3(1)--------->ZAT6 --------->ICU4    <---------YAB1    <---------ZAT14      --------   <---------DREB2C(2)    --------->STY1(2) <----------DOF2  <---------AHL20(2)--------->DEAR3(1)  -- --->YAB1  <---------HSFC1(2)  --------->ANAC46   <----------DOF2    --------->At4g35610 ------>NtERF2   aaatggcggcgggagcatccctagcactagcttgcgccataagtatctttggctttaagataaataatatgagctacactgccgcggcagctgcctatcc  14558100                      --------->LBD16                  <---------ARR14(2)                 <---------CCA1(2)       <---------RAP2.6(3)       <---------DDF1<---------LBD16       ------>NtERF2<---------LBD16       >>>>>>>>>>DREB1A       >>>>>>>>>>DREB2A       <---------RAP2.6(3)      >>>>>>>>>>AtTINY2       ------>NtERF2  --------->ANAC46      <---------ETT(1)<---------HSFB2a(2) <---------ARR14(2)      <---------ETT(2)--------->HSFB2a(2) --------->ARR14(2)      --------->RAP2.6(2)    --------->DEAR3(1)      --------->At1g77200  --------->At4g35610         --------->LBD16    <---------At4g35610 ---------->DOF2--------->RAP2.6(2)               <---------At4g35610    --------->At4g35610XXXXXXXXXXXXXXXXXXXX>MIR169G*  --------->HSFB2a(2)--------->At4g35610    ------>NtERF2<---------GLK1(1)     --------->RAP2.3(2)               <---------ZAT2 ---------ARR11(3)--------->ARR14(2) <---------At4g35610 <---------CCA1(2)                       <--- --------ZAT2  --------->YAB1--------->RAP2.6(2)     <---------LBD16     --------->ZAT2 <---------ANAC58 --ARR14(2)   <---------YAB1--------->DEAR3(2) <---------MYB52(1) <----------DOF2       <---------ANAC58 ->ARR14(2)--------->ICU4  <---------At4g35610--------->LBD16     ------>ZmHOX2a(1)     <---------RAP2.6(2) ------->ZAT2<---------ARR11(3)      --------->At4g35610<---------MYB52(1)          <----------DOF2   aagctctgccgacatgatcatatccgggaagccgacttcagccgcatccgctacttccggtatctatcctttcccagctaaattcgcattgcggtctctc  14558200  Previous    Next  AGI:  At2g34530.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN64229.1) Range:  from: 14556041    to: 14557324    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g34540.1    Description:  binding. contains domain HCP-like (SSF81901) Range:  from: 14557736    to: 14559309    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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