Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ANAC58                                                       --------->RAP2.6(2)                                                       --------->DREB2C(2)                                                       --------->ANAC58                             -                                 --------->ATHB12     --------->MYB46(3)                           --          --------->ANAC58       -------->HAHB4       --------->ATERF1(1)                        <---        ---------->DOF2          <---------ICU4       --------->DEAR3(2)                         <--- -----------GT1          --------->YAB1              <---------ATERF1(1)                    <-------- -->MYB46(1)             <---------ICU4              --------->SPL7                        --------->MYB52(1) -->MYB83--------->WOX13(1)     <---------ATHB12    <---------PCF5   --------->At5g28300   <--------- ----MYB59--------->ANAC58      <---------YAB1      --------->ARR14(2)  ---------->DOF2   --------->ARR14(2) --->AtSPL3   --------->At5g28300--------->YAB1   ------->GAMYB--------->DEAR3(2)         <---------ARR14(2) --->AtSPL8  ----------->GT1    --------->ICU4 --------->MYB52(1)   ----------->GT1     ----------->ARR10   aattacaaaatcaagcagtaaatttgatcatgaaatgattacccagtgccaacgggaccgccaataccgacggtaaaagctctctcagagaagttacggt  14539200                  ------>NtERF2                                <---------ANAC58           <---------GLK1(1)                                   <---------ANAC58           <---------ZAT2                                     <-------TEIL           --------->At4g35610                               --------->ALFIN1          <-----------ARR10                                --------->At4g35610         <------ZmHOX2a(1)                                 <---------ANAC58                       ---   <---------At4g35610<---------ZAT14                      <---------ANAC58               -------->P --------->DOF2  --------->DEAR3(1)             <---------ANAC46                          ------>MYB46(1) --------->HVH21<------NtERF2                   <---------ANAC58                          ------>MYB83 ------MYB46(3)<---------ATERF1(1)              <---------ANAC58                          =========== ------ANAC46 <---------DEAR3(1)               <-------TEIL<---------ANAC46             --------->AtMYB61 -At5g28300--------->ZAT2        <------ZmHOX2a(1)         <---------At4g35610       <---------ALFIN1 --GT1 --------->ALFIN1       <-----------RAV1(2)        <---------ZAT14             --------->REM1(1)   cgtgaagcggaggagctcggcgactgaagtagccaggagagtagatgggttcgtgtgagtgaggtgcgagtccatcgtggctatggtacaccttcccgtc  14539300             ------>NtERF2            --------->ANAC58            --------->ANAC58          <---------ATERF1(1)          <---------ALFIN1         --------->ANAC58         --------->O2         <---------TGA1a         ----------->HVH21         <---------O2         --------->TGA1a            --------->GLK1(1)         --------->ANAC58           <---------GLK1(1)         --------->ANAC46     <---------SPL7       --------->ANAC46       ------>NtERF2      --------->MYB46(3)     --------->DEAR3(1)      <---------MYB55(2)     --------->RAP2.3(3)      --------->DEAR3(1)    --------->ORA47(2)     --------->ANAC58       --------->RAP2.3(1)     --------->ANAC58      <---------ATERF1(1)    ------>NtERF2          ------>NtERF2   <---------ALFIN1        --------->LBD16                                         <---------AHL20(2)  --------->MYB46(3)      --------->DEAR3(1)                                  ----------->GT1    <--- --->ZmHOX2a(1)          <---------LBD16 ------>ZmHOX2a(1)                  <---------ANAC46    <---- ==================MYC_MYB--------->ANAC46   ----------->HVH21      <---------GLK1(2)           -----   cttccccacccacgacgccttcccttctccgccgtctgatttcctacttgacagaagaagtagagaaacagattagtgaggggaataaatcgtatcaaga  14539400                                                                   <---------AtMYB61   --------->ARR14(2)                                                              --------->YAB1     <---------bZIP60(1)                                                             --------->ICU4      --------->bZIP60(1)                                                          <---------YAB1  <---------ANAC58                                                          --------->ICU4  <---------ANAC58                             --------->ANAC58        ------>ZmHOX2a(2) <---------MYB46(3)                             --------->ANAC58      <---------ARR11(3) <---------AtMYB61<---------ARR14(2)                             --------->ANAC46      --------->ARR11(3)<XXXXXXXXXXXXXXXXXXXXXMIR2935    <----------DOF2        --------->ZAT6        --------->ICU4 --------->ICU4 --------->At4g35610 ---ZmHOX2a(2)        --------->YAB1             <---------YAB1 <---------YAB1 <---------At4g35610 -----ARR11(3)        <---------ICU4       --------->AtLEC2  <---------YAB1 <---------ANAC46 ---->ARR11(3)       <---------ATHB12   --------->WRKY18(1)--------->YAB1 <---------ANAC46 --------->LBD16   tcagaactttacagagaaaatcaatgataacacgaactcgtggtcatgctcatgatcgtgatgatgatgatggtggtcgtgtgatgccatttccgagaga  14539500                <---------At4g35610                --------->ZAT2                --------->At4g35610                <---------ZAT2               --------->MYB52(2)             <---------MYB52(1)            --------->LBD16           <---------HSFB2a(2)           --------->HSFB2a(2)                                ---------->DOF2          <---------LBD16                                  <--------HAHB4   --------->HSFC1(2)                                     <------ZmHOX2a(2)   <---------HSFB2a(1)                                    <---------YAB1   <---------HSFC1(2)                                     --------->ICU4   --------->HSFB2a(1)                               <---------HSFB2a(2)  <---------ARR11(1)                                 --------->HSFB2a(2)             --------->GLK1(2)  <---------ARR14(2)                                <---------LBD16                  <---------ARR11(3)  <-----------ARR10                               --------->GLK1(2)                  --------->ARR11(3)  ------->TEIL<--------P   <----------DOF2       --------->ARR14(2)                 *TSS  --------->ARR14(2)   --------->WRKY38(1)       <---------ARR14(2)                 <---------GLK1(2) <---------CCA1(2)   --------->REM1(2)           <---------GLK1(2)           <---------TOE2(3) <---------ARR14(1) --------->ALFIN1             <---------GLK1(1)         <---------AHL20(2)      <-   ctcgaatcttcttccggtagctgtgttgactttgagtagagctactactgggattctgggatcattaagcacagtttttaatgtaagaatctttctatat  14539600                                   <------NtERF2                                 --------->ETT(1)                                 <---------ANAC46                               <-----------HVH21                         <---------ANAC55(2)                       <---------ANAC58                                  <---------ANAC46             ---------->DOF2  <-----------RAV1(1)                        <---------ANAC55(1)       ------>ZmHOX2a(1)<----------DOF2                                  --------->ANAC55(2)      --------->TOE2(3)<---------ANAC58                            <---------TOE2(2)     --------->YAB1<---------GLK1(1)                       ----------->RAV1(2)              <-------- ----------GT1     --------->GLK1(1)      --------->AHL20(2)  <-----------HVH21            <---------   ttttctatcctaagtgaaaggagatgctttctctgtcgggagcataaaatgactgtaatacccctgtcatatgttaagtgtttgaaggcaaaattacagt  14539700                ----------->HVH21                ------->GAMYB              <---------At4g35610                                            <---------MYB46(3)             <-----------GT1                                                <--------P     --------->ANAC55(2)                                       ---------->DOF2<-------GAMYB     <---------ANAC55(2)                                    <----------DOF2<-------GAMYB ---------->DOF2  <---------ARR14(2)                                      <---------------AGL15          --------->YAB1  --------->ARR14(2)        <------MYB83                  =========================================== <------ZmHOX2a(1)          <------MYB46(1)               --------------->AGL15    --------->ZAT6 -At5g28300<---------AHL20(2)    <-----------GT1   --------->ARR11(3)     <---------MYB46(3)      --- --GT1  ------->TEIL      <--------P               <---------ARR11(3)    <---------AtMYB61    -------   agaggaaacgtattttaactgacaccaagttggtatcacagtccaagacttaaaatctttcactttaaagaagcgatggttgttaacacaataaagagca  14539800                                                                                      --------->SPL7                                                                                      --------->ZAT18                                                                                  <---------ICU4                    ----------->GT1                                              <---------YAB1    --             <---------TOE2(3)                                                 --------->YAB1  ------       <------ZmHOX2a(1)                           --------->AHL20(2)   --------->ZAT18  --------->ANAC46 =============MADS_MADS     --------->YAB1      --------->YAB1          <---------ZAT14--------->ANAC58 ------------>AGL15--------->DAG2    <------ZmHOX2a(1)        ---------->DOF2 <-------TEIL    ------- -->ZAT18   --------->MYB52(1)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        <---------ZAT18--------->ANAC58   caaaatataggaattaagggaaaggttttttcataagtaggaaacaagaagcataaaatccagacaaagtcgagttcacattcatgagtacgcctaacat  14539900                                             --------->ZAT2                                             --------->At4g35610                                        <---------ZAT14        --------->ANAC58                             --------->MYB52(1)                --------->ANAC58               <------                         ----------------->AGL1  --------->REM1(1)               --------->YAB1 --------->GT1      --------->AHL20(2)  --------->ZAT18        --------->ANAC46 <---------ATHB12 --->ARR11(3)--------->MYB52(1)         --------->ZAT14      <---------ALFIN1 --------->WOX13(1) -->YAB1  --------->YAB1 ----------------->AG<---------At4g35610      ---------->DOF2       <--------   attgaaaaacaaaaataaccgataaaatccaaaacgggagagagcacagcttcaacatcgattccaccccaaaaaagagtcaatcagagacgttttacat  14540000                                                <---------AtMYB61                                              <------MYB46(1)                                              <------MYB83                                       <---                                           <---------ANAC58                                      ----                                           <---------ANAC58                                   <------                                          <---------ZAT2      --------->LBD16                 -------                                          --------->ZAT2     <---------ANAC58               <--------           <---------MYB46(3)            ------>ZmHOX2a(1)   <---------ANAC58             <-------GAMYB         <---------ANAC58          --------->ZAT2            --------->ANAC55(2)         <-----------RAV1(1)    --------->ALFIN1               <---------At4g35610       --------->HSFB2a(2)    ------>ZmHOX2a(2) ---AtLEC2<----------DOF2          <---------ZAT2            <---------HSFB2a(2)  --------->ARR11(3) ---GT1  <---------ANAC58          --------->At4g35610      <---------LBD16       <---------ARR11(3)   gaacaagttgggcttgttggccttgtaagtcgtcttcagcttcctgcttggtggtctaaccttgcggaacaccaatgggaacttgatcttgctgttgtgg  14540100  Previous    Next  AGI:  At2g34470.1    Description:  UREG (urease accessory protein G); metal ion binding / nucleotide binding. similar to urease accessory protein G [Solanum tuberosum] (GB:CAC33001.1); contains InterPro domain Urease accessory protein UreG; (InterPro:IPR004400); contains InterPro domain [NiFe]-hydrogenase/urease maturation factor, Ni(2+)-binding GTPase; (InterPro:IPR012202); contains InterPro domain Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495) Range:  from: 14537814    to: 14539584    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g34480.1    Description:  60S ribosomal protein L18A (RPL18aB). Identical to 60S ribosomal protein L18a-2 (RPL18AB) [Arabidopsis Thaliana] (GB:P51418;GB:O64699); similar to 60S ribosomal protein L18A (RPL18aC) [Arabidopsis thaliana] (TAIR:AT3G14600.1); similar to unknown [Populus trichocarpa] (GB:ABK93710.1); contains InterPro domain Ribosomal protein L18ae; (InterPro:IPR002670) Range:  from: 14539787    to: 14541318    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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