Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------ICU4                                                                                 --------->YAB1                                                                                <---------ATHB51                                                                                --------->ICU4             ------->GAMYB                        <---------ANAC55(2)           <---------ATHB12            <----------ID1          =================================================================            --------->MYB46(3)      <---------------AGL15              ---------->DOF2 ----------DOF2         --------->AHL20(2)      --------->AHL20(2) ---------->DOF2 <---------YAB1 >AHL20(2)--------->MYB52(1)        --------------->AGL15   ------------------------>ANAC81     <----   cactttggagaataacgaccagaatataaaataaacttctaaattttgaattacataaaaaaaaaaaaaaaaagaaagaccaattatgaataccattttt  14533600  <---------------AGL15  <----------DOF2            <----------ID1  <----------DOF2------->TEIL                       ----------->GT1          <-------TEIL =================MADS_MADS                      --------->DAG2        ---------->DOF2 -----AHL20(2)--------->ICU4                    ---------->DOF2    ----------->GT1 ------->TEIL------   aattctttacaaggtaatgaatcccatcttttgtctatgttcttaagaaataaagggaaaaaatatgaattgttaaagattcatgtatgttttgaataca  14533700                                                                                                -----                                                                                        -------------                                                                                        <------------                                                                                       --------------                                                                                       <-------------                                                                                       --------------                                                                                       <-------------                              ----------->GT1                         --------->YAB1   <-------------                       <----------ID1              ------->TEIL  ------------>CBF      --------------                       ----------->GT1<---------AHL20(2)        --------->ANAC46       <------------- --------->YAB1      ---------->DOF2  --------->AHL20(2)        --------->ANAC58     ------->GAMYB --->ANAC46     ----------->GT1--------->YAB1<-------TEIL       --------->ANAC58    --------->DEAR3(1)   caattagaaactattcaatagaaaaaagaaaaatgaaaatttaaatattcatggatgtttgaatacacacaattagaaactattcaacgcccatataagg  14533800      --------->ARR14(3)      <---------ARR11(3)      <---------ARR14(3)      <---------GLK1(2)      --------->ARR11(3)                                                                --------->YAB1      --------->ARR14(2)                                                           ------------>CBF ------->CBF                                                                       <-------TEIL -->AGL15                                                                       <------MYB83--------- ---AGL15                                 <---------YAB1                        <------MYB46(1) --->AGL2                             --------------------->WRI1               --------->MYB111(1) ----AGL2                          ------->TEIL                                --------->MYB52(2) --->AGL1                         <---------ALFIN1                             --------->MYB46(2) ----AGL1      --------->AHL20(2)--------->At4g35610                          <---------MYB55(1) ----AG        --------->YAB1<---------ARR14(2)                 ----------->TBP--------->MYB59 --->AGL3   --------->WOX13(1)   --------->ZAT14     --------->AtMYB61       <---------MYB52(1) ----AGL3 ------------>CBF   --------->ARR14(2)   <---------ALFIN1  ----------->HVH21  <---------ATHB12   caattcaagattttcaattaaaaacttgctaaatctgcacccttgtgattctccacctccattactatatatgaccctcgttaggttcaatgaaaattct  14533900                                                          ------>MYB83                                                          ------>MYB46(1)                                                         ----------->RAV1(1)                                                       --------->MYB46(3)                                          --------->ARR14(2)                                          <-----------ARR10                                          <---------ARR11(3)                                          --------->ARR11(3)                                          --------->GLK1(2)          <-----------HVH21                --------------->AGL15     --------->ARR14(3)        <----------DOF2    <---------ALFIN1            --------->ANAC46 <<<<<<<<<TBF1   <-----------GT1 >KAN4(2)       <---------------AGL15     <---------ARR14(3)<---------ARR11(3)   ctacctccatctccattactaaaaacagagacatacaacaccaaaatcttcttcttcaccaacatattcactttcacagcaaaaaaaaacgagaggttct  14534000                                                                            <-----------RAV1(2)                                                                         --------->ANAC58                                                                         ----------->HVH21                                         <------ZmHOX2a(2)               --------->ANAC58                                         ===========================HOX2a_HOX2a                                        --------->ARR11(3)               --------->O2<----------DOF2                                        <---------ARR11(3)               --------->ANAC46                                    ---------->DOF2                      =======================bZIP_DOF        --------->SPL7              ===============================================bZIP_DOF      <---------SPL7             <------NtERF2                         --------->ANAC46    --------------->AtSPL3     <---------DEAR3(1)                     --------->TOE1(2)    --------------->AtSPL8     --------->ETT(1)              <------ZmHOX2a(1)      <---------DAG2 <-    <---------------AtSPL3   <-----------HVH21        <---------MYB46(3) --------->TGA1a    ---------   ctcttattcgtaccgttttagcaaacaaatgggtcggagaaagatcaagatggagatggttcaggacatgaacacacgacaggttaccttttcaaaacgg  14534100                                                                                                -----                                                                                                -----                                                                                          <----------                                  <---------ALFIN1                                        -----------                                  --------->ANAC58                                --------->ANAC58                           <<<<<<<<<AtLHY                                   <------ZmHOX2a(1)   <----                   <---------ANAC58                                   <-----------GT1    <-----------       <---------MYB46(3)  <<<<<<<<<AtCCA1                        <----------DOF2 --------->ANAC58 -----ZmHOX2a(1)   <---------ANAC58           <----------CDC5<---------MYB52(1)<------NtERF2  <------ >MYB52(1)  <---------HSFB2a(2)   --------->ANAC58        <------NtERF2  <-----------RAV1(2) ------>ZmHOX2a(1)   aggactggtttgttcaagaaggcgagcgagttagccacgctctgcaacgctgagttgggcatcgttgtcttttcaccaggaggcaagcctttctcctacg  14534200        --------->YAB1      ------->TEIL      --------->ARR14(2)      --------->GLK1(2)      <---------ARR11(1)      <---------ARR14(2)     <---------ARR14(1)     <---------CCA1(2)     <---------GLK1(2)                        --------->ICU4 ---->HSFB2a(2)                             --------->YAB1 ---->LBD16                             --------->GLK1(2) -----AGL15                             <---------ARR14(2)               --------->DAG2 ---->AGL15      <-------GAMYB   <---------YAB1                         ---------->DOF2 -----HSFB2a(2) <-----------RAV1(1)     --------->ARR14(2)         ----------->GT1 <-----------GT1 ------AGL1 <---------GLK1(2)  --------->YAB1 <---------YAB1 <---------ANAC46   <---------ICU4 ---LBD16 <---------YAB1      <-------TEIL <---------YAB1 --------->ALFIN1   ----------->GT1   ggaaaccgaatcttgattctgttgcagagcgattcatgagagaatatgatgattcagacagtggcgatgaagaaaaaagtggtaattacaggcctaaact  14534300                                                                                        --------->ZAT2                                                                                        <---------ZAT2                                                                                        --------->At4g35610                                                                                        ----------->RAV1(2)                                                                                        <---------At4g35610                                                                                    <---------ARR14(2)                                           --------->At4g35610                      --------->ARR14(2)                                           --------->ZAT2                           ------->TEIL                                           <---------At4g35610               --------->GLK1(2)                                           <---------ZAT2                <------ZmHOX2a(1)                               ------->GAMYB                            --------->At4g35610<---------LBD16            ------->TEIL     --------->ANAC58                         =============================RAV           <---------DOF5.7(2)--------->MYB46(3)                      <-----------RAV1(2) <---------ANAC46       <---------ANAC46      --------->ANAC58                       <-----------HVH21  <-----------RAV1(1)   gaagaggctgagtgaacgtctcgatttgctcaaccaagaggttgaagctgagaaggaacgaggcgagaagagtcaggagaagcttgaatctgctggggat  14534400                                                                                            <<<<<<<<<                                                        --------->CCA1(2)                   ---------                                                       --------->ARR14(2)                --------->WRKY18(1)                                                       <---------ARR14(2)       <------ZmHOX2a(1) <--    <-------TEIL                            <---------ATHB12                   <------MYB83 ---------   --------->GLK1(2)           <---------------------WRI1                      <------MYB46(1)  -----   --------->CCA1(2)       -------->P ------->TEIL ---------->DOF2           <--------P <-----------HVH21   gagagattcaaggagtccattgagacgcttaccctcgatgaactcaatgaatacaaagataggcttcagacagtccatggtaggattgaaggtcaagtca  14534500  Previous    Next  AGI:  At2g34440.1    Description:  AGL29; transcription factor. similar to AGL91, transcription factor [Arabidopsis thaliana] (TAIR:AT3G66656.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77992.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) Range:  from: 14534029    to: 14534768    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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