Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->LBD16                                                                  --------->SPL7                                                                 <------NtERF2                                                                 --------->ATERF1(1)                                                                ------>NtERF2                                                                <---------SPL7                                                             <---------ATERF1(1)                                                             ------>NtERF2                                                             --------->LBD16              --------->At4g35610                           --------->ANAC46              --------->ZAT2                                <---------DEAR3(1)              <---------ZAT2                      <---------MYB52(1)--------->ANAC58            <------ZmHOX2a(1)                    --------->At5g28300--------->ANAC58          --------->ALFIN1                      ----------->GT1 <-----------HVH21      <---------LBD16                        ------->GAMYB <---------LBD16    ----------->HVH21                       --------->MYB46(3) --------->DEAR3(1)   --------->SPL7                           <---------MYB52(2) <---------ANAC58 ------>ZmHOX2a(1)             <------NtERF2<---------MYB111(2)<---------ANAC58 -------------->SPL14<-----------HVH21      <---------MYB55(2)--------->ATERF1(1)                  --   atccttacgacggaggagctcgcagtcactggaggcatttttgacaacaaccgttaatctctccggcgtcccgctaattcaaaccctagcttcaatttca  14472500                                                                            <-------TEIL                                                                     --------->TOE1(3)                                                                     --------->TOE2(3)                                                                   ------>MYB83               <---------DAG2                                      -------->P--------->ATHB12          <---------ANAC46              <<<<<<<<<CBP60g            ------>MYB46(1)          <---------ANAC58   <---------ALFIN1                     --------->MYB55(1)          <---------ANAC58  --------->MYB46(3)                   <---------MYB46(2)               <--  <---------ZAT2           ------>ZmHOX2a(1) ---------->DOF2     <---------MYB59                  <-- ----->GAMYB   <----------DOF2          <<<<<<<<<SARD1        <---------WRKY18(1)           <--------   acagagctcgtctcgtgctttatctcttcctccaccgttccaaatttcaaagagactccaaacttgacctacctcaaattcatttgcaactcttgatatt  14472600                                  --------->At1g77200                                  --------->DEAR3(1)                                  --------->DREB2C(2)                                  ------->GAMYB                                  ----------->HVH21                                 <------NtERF2                                 --------->DEAR3(2)                <---------ANAC58 -------ANAC58                   --------->MYB46(3)        <---------At4g35610 -------ANAC58                  ------>NtERF2         <----------DOF2 -ARR11(3)               <----------DOF2         ---------->DOF2   <---------ANAC58   tcttgagaacgagagatggtattagttcttttgccaccgacgagaagagaataaagctttgagctcgtagcgttctctaggctaaacttttaaaaacact  14472700                                            --------->YAB1                                           <-----------------AGL1                                         --------->GLK1(1)          <---------ICU4                                   <---------ANAC58                 --------->YAB1                                   <---------O2 --------->ARR14(2) <---------ATHB12                                   <---------ANAC58                <---------ATHB51  --------->DAG2                                   <---------ANAC46    --------->ANAC58        --------->YAB1  ------                                   <---------bZIP60(2) ----------->GT1   --------->TOE2(3)   ------>ZmHOX2a(1)                                 --------->MYB52(1)    --------->ANAC58<-----------GT1      <--------        --------->TOE2(3)----------->GT1 <---------GLK1(1)       --------->WOX13(1) ---------->DOF2   ctccataaaaacttaacaagagaagaatggtgaagtaacgtggatatcagaataggcaagaaaaaaccaattataacttaataagaaaaagggtcctaat  14472800                                                                                 ------>ZmHOX2a(2)                                                                                --------->GLK1(1)                                                       <---------ICU4           <------ZmHOX2a(2)                                                      <---------YAB1            <---------GLK1(1)                                                      --------->ICU4           <---------ARR14(2)                                                  <---------ARR11(3)           <-----------ARR10                                            ------>ZmHOX2a(2)                  <---------ARR14(3)                                           --------->CCA1(2)                   --------->ARR11(3)                                           <------ZmHOX2a(2)                   <---------ARR11(3)                                          --------->ARR14(2)                   <---------AGP1--------                                          <---------ARR14(2)                   --------->GLK1(2)                                          --------->AGP1<------------CBF       --------->ARR14(2)                 =================================HOX2a_HOX2a                 <------ZmHOX2a(1)      ----------->GT1       --------->TOE2(3) --------->LBD16          --------->MYB52(1)    -------- ---->DOF2       <------ZmHOX2a(1)      ----------->ARR10         <---------AHL20(2)--------->HSFB2a(2) -MYB59          ==================================HOX2a_HOX2a    --------->AHL20(2)<---------HSFB2a(2)   agcaaaattagaaaatagaggagcccaaaaccctagtcaaaatagatccgagggtcttaattgcaaaattaaaaaacagaggatctctcgaaaaacctta  14472900                                                          --------->ARR14(1)                                                         <---------ARR14(2)                                                         --------->ARR11(3)                                                         <---------GLK1(2)                            *TSS                         --------->ARR14(2)                         <------NtERF2                 <---------YAB1<---------ANAC46          ------                         ----------->HVH21             ----------->ARR10<---------ARR14(2)    -------                        ------>NtERF2       <----------DOF2          <---------ZAT6          <-------                     <---------RAP2.3(1)    <---------DAG2--------->GLK1(2)      <------ZmHOX2a(2) ->TOE1(3)          <---------DEAR3(1)  <---------ZAT18<---------TOE2(3)--------->ARR14(2)  <-------- ->TOE2(3)    ------------>CBF     <----------DOF2  --------->ICU4 <---------ANAC46         ---------   aaccctactctcaagtctcaattcggcgcgacggactctttgttcacttttgtaattaagattctcttgtagtgtatatggagatcgatttgggagctaa  14473000    <------MYB46(1)                     --------->ZAT2    <------MYB83                        <---------At4g35610   --------->MYB59                      --------->At4g35610   --------->MYB46(2)                   <---------ZAT2  <---------MYB55(1)                 --------->At4g35610 --->MYB52(1)                <---------ARR14(2) ---->HVH21                  --------->GLK1(2) --MYB52(2)                  --------->ARR14(2)                   --------->At4g35610            <--- -At4g35610                  ------->TEIL                         <---------At4g35610        <------- >At4g35610        --------->MYB46(3)<---------At4g35610         ------->TEIL    ---------->DOF2 <---   cgcgtttggtatcgacttccatccatcgacgaatctagtagctgctggtctcatcgatggccacttgcatctgtaattccttctaaagcccttctctttg  14473100                                                                                       <---------GLK1(2)                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)        <---------ANAC58                                                    --------->ARR14(2)     <----------DOF2                  --------->GLK1(2)                     <---------ARR14(2) ------ANAC58                       --------->MYB46(3)                --------->ARR14(2) ---DOF2<---------ANAC58      --------->YAB1                          <---------ARR14(2)          <-- ------ANAC58              --------->YAB1                            <---------At4g35610--------->GLK1(2)   cttcttcctttcgttttccacattcccaagaatcatcaacaatctatgtaatctccaaatttttctcttgcagataccgatacgactcagattcttcact  14473200                                               <---------WRKY18(1)                                              --------->WRKY38(1)                                              --------->WRKY12                                              --------->WRKY45       --------->YAB1                        --------->DOF5.7(2)                                    <  <---------ANAC55(2)                        <---------MYB52(1)                                 -----  ----------->GT1                       <----------DOF2                                        ------  --------->ANAC55(2)  <---------At4g35610  <-------GAMYB                                   --------- >>>>>>>GRF7           --------->At4g35610 <---------ANAC46          --------->GLK1(2)      --------- ---------HVH21  <----------DOF2    ---------->ID1 <---------ZAT14  <---------GLK1(2)       ---------   tgtcaggtatcaaaacgctcttttcatctccaaagtttgtctctttcgttgactggacagactaagaagagaatcgctgaaatttgtgtagggaacgtaa  14473300                                           <---------ICU4                                         <---------TOE2(3)                                        --------->YAB1                                    --------->ATHB12    <---------ZAT18             <---------DEAR3(2) <---------ANAC58               <------MYB83 <---------ANAC58               <------MYB46(1)                                          --------->ARR14(2) -------TEIL                 <---------MYB52(1)                                          <---------ARR11(3) ---->DAG2                 <----------DOF2<---------YAB1                                 --------->ARR11(3) ---->DOF2               <---------At4g35610                                             <-----------ARR10 -->GT1                 <---------AGP1<---------WOX13(1)      <----------DOF2            <---------ARR14(2) >ANAC58         <---------ANAC46  <-------TEIL           ---------->ID1          <---------At4g35610 >ANAC58     <------ZmHOX2a(1) --------->MYB59          <---------MYB46(3)        --------->At4g35610   agttcgtgcccataaggagtcttgtagagctgttcggttcattgatgatggccaaagtttgttcctttaaacttcaactatctgagctcaatatctgagc  14473400  Previous    Next  AGI:  At2g34260.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT2G43770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50076.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680); contains InterPro domain WD repeat protein 55 (InterPro:IPR017422) Range:  from: 14472928    to: 14475610    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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