Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------MYB46(3)                             --------->ZAT2                             <------NtERF2                             <---------At4g35610                      --------->ARR11(3)                             --------->At4g35610                      <-----------ARR10                             <---------ZAT2                           <---------ARR11(3)                         --------->DEAR3(1)                          --------->RVE1(1)                      --------->ANAC46                               --------->CCA1(1)           <---                ----------->GT1<-----------RAV1(1)             <---------HSFB2a(2)       <---------HSFC1(1)                <---------MYB46(3)     ---------->DOF2       --------->At4g35610         --------->HSFC1(1)               --------->ALFIN1--------->ALFIN1        <------ZmHOX2a(2)                 --------->HSFB2a(2)         <------ZmHOX2a(2)  ------>NtERF2   --------->MYB52(1) --------->HSFB2a(2)       <---------HSFB2a(2) -->GLK1(2)    <---------AtMYB61 --------->ALFIN1      ============================HOX2a_HOX2a  ----- --GLK1(2)------>ZmHOX2a(2)<---------DEAR3(1)         <---------ARR11(3)          --------->ARR14(2) --ARR14(2) <---------DEAR3(1)<---------DEAR3(1)      --------->ARR11(3)    ------>ZmHOX2a(1)   ----- ->ARR14(2)<---------LBD16--------->LBD16--------->ANAC58 <---------At4g35610     <---------ARR14(2) ->ARR10--------->ARR11(3)<---------LBD16--------->ANAC58 --------->At4g35610   <---------MYB46(3)   tcaagcttgagatcgcggtggtaaacaccgcggctgtggcagaaagcaacggatgagatcaactgctggaaatatctcctcgcggttccttctcgaagcc  14438900                                    --------->HSFB2a(1)         <------NtERF2             --------------->AtSPL8                                 --------->ZAT18        ------>NtERF2 <---------ARR11(3)--------->ANAC58                                <------------       --------->DEAR3(1)          <---------TOE1(2)                                   <------MYB83      --------->MYB46(3)   --------->ANAC46             <---------ARR11(3)             <------MYB46(1)      <---------MYB55(2)   --------->DEAR3(1)          <---------CCA1(2)              --------->MYB111(1) ------>ZmHOX2a(1)    --------->ARR11(3)--------->ANAC58--------->ARR11(3)           <--------P ------RAP2.6(3)  ---------->DOF2  --------------->AtSPL3                            ================ ---->RAP2.6(2)--------->YAB1  --------->HSFB2a(2) ----------->GT1          <---------ARR14(2) ---->DEAR3(1)<---------YAB1------>NtERF2     --------->YAB1                --------->ARR14(2)   gtcctctagccaccgtattataaagctctccgcctcgaacgtactccatcacaatgtaaatctttgtcttcgtagccataacctcgagtaggtgtacaat  14439000                  <------NtERF2                <---------ANAC46                <---------DEAR3(1)               <---------LBD16             --------->ANAC58             --------->TGA1a             <---------TGA1a             --------->ANAC46             --------->ANAC58             --------->O2             <---------O2             <---------DEAR3(1)          <---------REM1(2)          --------->ARR14(2)         ------>NtERF2         <------NtERF2        <---------SPL7        ----------->HVH21        <---------ZAT18       <---------ANAC58       <---------ANAC46       <---------ANAC58      --------->ATERF1(1)                                          --------->ARR11(3)      <------NtERF2                                                <---------ARR11(3)     <---------ATERF1(1)                                      <---------ZAT14    --------->ALFIN1 <------ZmHOX2a(1)               --------->ARR14(2)                <----------DOF2    <---------DEAR3(1)     <---------GLK1(1)         <---------ARR14(2)            <---------ATHB12 ---AtSPL8<---------ARR14(2)                        --------->WOX13(1)           --------->WOX13(1) ======================MYC_MYB             ----------->HVH21  --------->ZAT14 <-----------HVH21    <-   gtaagggtggcggacacggcggaggattgaaatctcccgtttaatatgaccggccaatccactcttcactatcttctccttgtcaatgactttgatggca  14439100                                                  --------->LBD16                                                 <---------ANAC58                                                 <---------ANAC58                                                 <---------ANAC46                      --------->LBD16       --------->ZAT2                     <---------ANAC55(2)    --------->At4g35610              <---------ANAC58                     <---------ANAC55(1)    --------->HSFC1(2)               <---------ANAC58                --------->HSFB2a(1)--------->TOE1(3)                     <---------ANAC58                <---------KAN4(1)<---------ARR11(3)                      <---------ANAC58               ------->TEIL      --------->ARR11(3)          <---------HSFC1(2)    --------->ANAC58 --------->ANAC55(2)    <---------At4g35610         --------------->AtSPL3    --------->ANAC58 <---------ANAC58       <---------HSFB2a(1)         --------------->AtSPL8    --------->ANAC46 <---------ANAC46       --------->HSFB2a(1)     ------>ZmHOX2a(1)            <---   ------>ZmHOX2a(1) <---------ANAC58       <---------HSFC1(2) <----------DOF2                   <--- --------ARR11(3)--------->KAN4(2) --------->TOE2(3)         --------->HSFC1(2)       --------->YAB1   acatcctcgccagaatgaatgttccgtgctaaatagaccttagcgaagcttccgtggccaagaagctttcctatttcgtacttgtccatgagaatagagc  14439200            ------>NtERF2            <---------ATERF1(1)           --------->DEAR3(1)           <---------ZAT18         <---------At4g35610         --------->At4g35610         <------NtERF2                                                             ------>NtERF2         <---------LBD16                                                          --------->ANAC58         --------->LBD16                                                          --------->ANAC58       <---------DEAR3(1)                                                         --------->ANAC46       --------->ZAT18                                                           --------->MYB46(3)      --------->ATERF1(1)  <---------LBD16                                     --------->ARR14(2)   < ------ANAC58           <----------DOF2                                        <---------ARR14(2)   < ------ANAC58     ------>ZmHOX2a(1)        <----------DOF2   <-----------GT1 ----------->ARR10      <   cttgtggagtccgcggactcctcgggctctctggagtactggtctctttgttcgtattttttgtaacgattcgagcaagaagacccgccatgaattgtat  14439300          <------NtERF2         <---------LBD16         <------NtERF2         --------->LBD16        <---------ANAC46        <---------DEAR3(1)        <---------LBD16       <---------LBD16       --------->ATERF1(1)     --------->TCP20  --------->ALFIN1      <---------ANAC46                   <----------DOF2  <---------MYB52(1)    --------->ALFIN1           <---------At4g35610 <-------GAMYB        ------->GAMYB                --------->At4g35610                             <- ---------ANAC46   --------->MYB52(1)            --------->SPL7                                   <-- ---------ANAC58  <---------WRKY12              <---------MYB52(1)         <--------P           ----- ---------ANAC58  <---------WRKY38(1)          --------->LBD16          <---------YAB1          <----   tggcgttgggccggggatggccaacggtgtagatagtacttgagccatccgtaggctgagacttttatttagttctggttgctctctaagtgtaaatgta  14439400                                                                                              <------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                            <--------P                                                                                           <-------GAMYB                                                                                          <---------ANAC46                                                                                       <---------ANAC46                              --------->LBD16                                    --------->ARR14(2)                             <---------LBD16                                     <---------ARR11(3)                 <---------REM1(2)                                               --------->ARR11(3)       <-------GAMYB        <---------LBD16                                      <---------ARR14(2)      <---------MYB46(3)   <---------At5g28300  --------->ANAC58                 --------->ARR11(1)      --------->MYB52(2)  <-----------GT1       --------->ANAC58               ----------->ARR10    <---------ANAC46    <----------DOF2  <---------------AGL15             --------->YAB1<------NtERF2 <---------MYB52(1) --------->ANAC58     --------------->AGL15      <----------ID1  <---------AtMYB61 ----------RAV1(1)  --------->ANAC58    ----------------->AGL3   --------->MYB52(1) <-----------RAV1(1) ----------AtMYB77<---------ALFIN1      ----------------->AGL2  --------->ARR14(2)--------->CCA1(2) -->TEIL       <---------ETT(1)        ------->TEIL             <---------ARR14(2)--------->ARR14(1) -------GT1    --------->ANAC46     <---------MYB52(2)   XXXXXXXXXXXXXXXXXXXX>MIR774B  --------->ALFIN1   actgttgtttgttgattccgacacggttttaccgggaaacgaaccaaaacaagaaaatgaaatgaagaaacggacaaaaataagatatggtggggttgtt  14439500                                                                                     --------->At4g35610                                                                                     <---------At4g35610                                                                                    --------->GLK1(2)                                                                                <---------HSFC1(1)                                                                          <---------YAB1                                                                         <---------TOE2(2)   <-------GAMYB                 <---------ANAC46                        <---------TOE1(2)---------->DOF2 -GAMYB                          <---------ANAC58                <----------DOF2--------->HSFB2a(2) ->MYB55(2)                      <---------ANAC58            --------->WRKY38(1)<---------HSFB2a(2) --MYB46(3)                 <----------DOF2    <-----------GT1   <---------DAG2 --------->HSFC1(1) ->MYB111(2)             ---------->ID1   <-----------TBP    --------->WRKY12  <---------ANAC46   gtttcggttgtgatgttgtcttaacttggcctttttcgtgttcgttttataacagttttcgagttgactttatcttatgtttcgagaagctgaaaagtca  14439600                                                                                               ------                                                                                --------->GLK1(1)                      <---------TOE2(3)                                        <---------GLK1(2)           <------------CBF                      --------->ARR11(3)            <---------ARR14(2)         <---------AHL20(2)                      <---------AHL20(1)      ----------->HVH21   --------         --------->ARR11(3)                      --------->AHL20(1)   ------->MYC3         <---------YAB1         --------->AHL20(1)            ------>ZmHOX2a(1)              <-------MYC3       --------->AHL20(2)         <---------AHL20(1)          --------->YAB1         ------->GAMYB<---------SPL7  --------->YAB1      --------->AHL20(2)           <-----------GT1       ----------->RAV1(1)   --------->ARR14(2)   tttgattttaaaatattgctatttgatgttgaagttttatcctaatccaaatattttgccaacagaataacacgttggacggattttcaaattataaaag  14439700                     --------->ANAC58                     --------->ANAC58                        <------ZmHOX2a(1)       --------->WOX13(1)                     --------->ANAC55(1)                 ---------->DOF2     <---------WRKY18(1)                     --------->ANAC46                 --------->TOE2(3) <---------TOE2(3)                     --------->ANAC55(2)           <----------DOF2      --------->DAG2 <---------ATHB12 --->DAG2            <---------ANAC55(2)        <---------TOE1(3)       <---------TOE1(3)       <---- -->DOF2            --------->SPL7             <-----------GT1  ----------->GT1    <---------YAB1   gcaaacttatatgttctatccatacgcaatgtcaactttggaatacatttaagctttcttaaaggacagataataaggttgacttatcaatgaggctgat  14439800  Previous    Next  AGI:  At2g34180.1    Description:  CIPK13 (SNF1-RELATED PROTEIN KINASE 3.7); kinase. similar to CIPK18 (SNF1-RELATED PROTEIN KINASE 3.20), kinase [Arabidopsis thaliana] (TAIR:AT1G29230.1); similar to CBL-interacting protein kinase 19 [Populus trichocarpa] (GB:ABJ91226.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 14437840    to: 14439348    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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