Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                               ------                                                                                             xxxxxxxx                                                                                            xxxxxxxxx                                                                                           <xxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                          ---------->DOF2                                                                                         xxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                    <---------AHL20(2)                                                                                 <---------AHL20(2)                                 <---------TOE2(3)                       <----------ID1<xxxxxxxxxxxxx                           --------->AHL20(2)                        ---------->DOF2<---------YAB1                           <---------AHL20(2)                    ----------->GT1 --------->AHL20(2)    <---------ANAC58    --------->YAB1                         <---------TOE1(3)<---------AHL20(1)    <---------ANAC58<---------AHL20(2)                     <----------DOF2      --------->AHL20(2) ->DOF2  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->AHL20(2)<---------TOE2(3)<---------AHL20(2)   gaggtttcttacaaattggtttttatttataaattgagattagagaattaaaccgaaattggtttaagggtaaaagggacaatttttttattgaaagtgc  14412900                  --------->ARR14(2)                  <---------ARR14(2)                  ------->TEIL                  --------->ARR11(3)                  <---------ARR11(1)                 <---------ARR14(1)                 <---------CCA1(2)                xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)               <---------ANAC58        ---------->DOF2      --------->HSFB2a(2)      <---------HSFB2a(2)                           ----------->GT1      <---------YAB1<---------ANAC46              <---------ANAC58  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <---------ANAC58 ----ZAT18     <---------ANAC58                   <---------ANAC46 --->ZAT18     <---------ANAC46               <----------DOF2 xxxxxxxxxxxxxxx>smallRNA(fl3)            xxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxx>smallRNA(le3)          --------->DAG2 xxxxxxxxxxxxxxsmallRNA(le3)          ---------->DOF2                                  <---------AHL20(2) xxxxxxxxxxxx>smallRNA(si3)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <---------AHL20(2) xxxxxxxxxxx>smallRNA(si3)          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    ------->TEIL   <---------AHL20(2) xxxxxxxxx>smallRNA(i2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         --------->ANAC55(2) xxxxxxxxxxsmallRNA(le3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <----------DOF2<---------AHL20(2)   cctatgttctgaaagtgtcgtatcttggaaattgtttgagaaaagtgtctttgagtgtaatattctctttcatttatgtatttttttttttatttttttt  14413000                         <----------DOF2                  --------->AHL20(2)                   ---------->DOF2                        <---------AHL20(2)                --------->AtLEC2                        --------->YAB1                       --------                --------->ANAC58                   ------------>CBF                    <-------------                --------->ANAC58              ---------->DOF2                      <----------DOF2                --------->ANAC46<----------DOF2   <------ZmHOX2a(1)      <---------YAB1--------------         --------->ZAT6 <---------DAG2     --------->GLK1(2)    ---------->DOF2<---------GLK1(2)   --   tggtttagcaaacactacatgcaaagccttttggctattttggagaatcaaaggacaattttaaataaaagcatcattttagatactttctgtaatgaga  14413100                                            <------------CBF                                          --------->AHL20(1)                                          --------->ARR11(3)                                        <---------ARR11(3)           <---------GLK1(2)                                        --------->ARR11(3)         <---------YAB1    --------->DAG2     <---------AHL20(2) <---------AHL20(1)    <---------ATHB12  ---------->DOF2      --------->AHL20(2)--------->CCA1(2)     ------>MYB83 ->YAB1    --------->YAB1    <---------AHL20(2)             ------------>CBF --AGL15  <---------YAB1   <---------AHL20(2)             <-----------GT1    XXXXXXXXXXXXXXXXXXXX>MIR851-3P ->AGL15  --------->ICU4   --------->AHL20(2) ----------->GT1  ------>MYB46(1)                   ---- ------->AHL20(2) <---------ATHB12 <---------ANAC46--------->ICU4--------->YAB1           -----------   ataaaaaaggtgatcatcaaatcatttatataaatttgtgtagatatattgtaatatttgataccaatcttgattcttgaatagcaaacaaaaccaatat  14413200                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                             --------                                                        <---------ICU4                  ----------->TBP                                                     --------->YAB1                   --------->AHL20(2)                               ---------->DOF2    --------->ANAC46              --------->AHL20(2)---                          <------------CBF<---------AHL20(2)                --------->AHL20(2) <xxxxx                         <---------AHL20(2)   <-----------GT1    ------------>CBF     ----------->TBP     <-------TEIL       <---------YAB1    --------->AHL20(2)   <---------------AGL15 --------->AHL20(1) ----->YAB1        --------->YAB1        --------->AHL20(2)    --------------->AGL15 <---------AHL20(1) ->CBF           ------------>CBF       ----------->TBP<---------YAB1 --------->YAB1--------->AHL20(2)   caaaatatacatatttatcaacaatatttattgtaaagaactataaaattacacatcatcattttctctcaatagaaataaactaaatatatataaaacg  14413300 ----->ZmHOX2a(2) ------->GLK1(1)                                                                        <---------YAB1 -----ZmHOX2a(2)                                                                      <-----------GT1 --------GLK1(1)                      <---------ICU4                              <---------MYB52(1) ---->TEIL                          --------->ARR11(3)                           --------->LBD16 ------>ARR11(3)           <---------ANAC58                                    <---------LBD16 -------ARR14(2)           <---------ANAC58                                  <---------ARR14(2) -------AGP1               <---------ANAC46                                  --------->ARR14(2) -------ARR11(3)    <---------DAG2  --------->GLK1(2)                       --------->ATERF1(1) ->MYB52(1)--------->TOE2(3)      --------->ICU4                           <---------ATERF1(1) ------>ARR14(2)    <----------DOF2--------->YAB1                          <---------RAP2.6(3) xxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->YAB1    <-----------TGA1        --------->RAP2.6(2) <------   gatctctcaaaaacctctatgactttttttcttgtaataatcttggcaatttcgtcatccaactacaatgttttggccgtctccggtattacgatgcttt  14413400                                                                                  --------->YAB1                                                                  --------->CCA1(2)                                                                 <---------ARR11(3)                                                                 --------->ARR11(3)        <---------                                                                 --------->ARR14(2)     <-----------GT1                                                           <---------HSFB2a(2)    <---------ICU4                --------->ANAC46                           --------->HSFB2a(2)--------->AHL20(1)                --------->ANAC58                         <-----------GT1      <---------AHL20(1)              <---------ALFIN1                       <---------------AGL15    --------->AHL20(2)            --------->YAB1                           ================================================   <---------ANAC58                                  --------------->AGL15    <---------AHL20(2)   <---------ANAC58                                  <----------DOF2      <---------AHL20(2)  <------ <-----------GT1--------->ANAC58                --------->YAB1   <---------ARR14(2) <---------YAB1 ----DOF2--------->WOX13(1)    --------->YAB1  <---------YAB1  ----------->ARR10 <---------YAB1<-----   ttttttcttgacaatcacactccatatatcaattcatgatgttttttttatgatgctttttacagaagatttgtgtttattttattattatttctttatc  14413500                                                           --------->ANAC58                                                           --------->ANAC58                                                         --------->MYB46(3)                                                       ----------->RAV1(1)                                                    --------->ANAC46                                       --------------->AGL15                                       <---------------AGL15                                      ----------------->AGL2                               <---------   ------>ZmHOX2a(2)                  <-----------------AGL3                           <---------AHL20(1) -DOF2                     --------->AHL20(2)       --------->LBD16                    <---------ARR11(3) =======================================================MADS_MADS                      --------->AHL20(2) ---ARR11(3)               <---------AHL20(2)     --------->DEAR3(2)                   --------->AHL20(1) ----YAB1         ----------->GT1     ----------------->AGL3                   --------->ICU4   tttgatcgtttttagagaaatagtgaaatttatatttttctccaaatatagaaccggcaacaagcattcaatctatatgtaagtatcaatattttacatg  14413600                              <---------AHL20(2)                          <---------AHL20(2)                         <---------AHL20(1) <------NtERF2                                           -                         --------->AHL20(1)------>NtERF2                                            <                  <---------WOX13(1)      <---------ALFIN1                         --------->HSFB2a(1)               <---------YAB1 --------->AHL20(2)   <-------TEIL      <-----------RAV1(2)<---------YAB1 --GT1         <---------AHL20(2)        <---------ABI4(2)<----------DOF2         ------->TEIL   ----   tttttatgagttttgttttaattgatatatatttatatgtagggccaccgaaatgcattgctctatgtaggccagggtattacgaacgttttgaatgctt  14413700            ------->GAMYB                          ----------->RAV1(1)                   <---------AHL20(2)         --------->MYB52(1)     <-------GAMYB     --------->REM1(1)                     --------->AHL20(1) <---------ICU4          --------->ATHB12 --------->LBD16                        ----------->RAV1(1) --------->ATHB12       --------->ICU4   <---------HSFB2a(2)            --------->YAB1  <---------AHL20(1) -------->ICU4          <---------YAB1   --------->HSFB2a(2)         <---------ICU4     --------->AHL20(2) ---------YAB1        --------->YAB1<---------ANAC58         <-----------RAV1(1)<----------ID1   <--- -------->ATHB5      <---------YAB1 <---------ANAC58  ------->GAMYB --------->ICU4      <---------AHL20(2)   ccatgattgtataacggaagggtatgatgatgggagttgtgttccagggcctacaacagcaaaatgtggcataatcacaaaaacaacaaataaaatttgt  14413800  Previous    Next  AGI:  At2g34123.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G03936.1); contains domain PD864278 (PD864278) Range:  from: 14413319    to: 14413821    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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