Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->At4g35610                                        --------->ZAT2                                    ------>ZmHOX2a(1)                        <---------ANAC58                               --------->At4g35610  ------>ZmHOX2a(1)        <---------ANAC58                          ----------->HVH21        <---------ANAC58          <---------bZIP60(2)                       <------ZmHOX2a(1)<---------At4g35610                 <---------TOE2(3)               <---------ANAC58<---------ZAT2--------->ZAT14              ----------->HVH21 ------At5g28300 ----------->HVH21  <-----------HVH21                <-----------HVH21 -------GT1    <---------ANAC58<---------At4g35610 <---------ANAC58 --------->bZIP60(2)   accgcattggccttggtacttgacaggagtgacagctccttcagctctccagtccttgctctcgactaccatgtcactgacgttccaagtctgagacgat  14401500                                                                                   <---------ARR14(2)                                                                             <---------DEAR3(2)                                                                             <------MYB83                                                                             <------MYB46(1)                                          <----------DOF2                    <---------MYB46(3)                                    --------->MYB59                         <---------TOE1(2)   <----                                  <<<<<<<<<MYB2                            <---------MYB52(1) -------           --------->AtMYB61      <---------MYB52(1)               --------->GLK1(1)   --------->LBD16           <---------ALFIN1--------->HSFC1(2)                      <---------GLK1(1) <---------LBD16          --------->MYB46(3)      <<<<<<<<<MYB1    <---------MYB52(1)   ------>ZmHOX2a(1)  <---------ARR14(2)        ------>NtERF2      <---------HSFC1(2)   <---------LBD16  <------ZmHOX2a(1) --------->ARR14(2)   atcgttttggcgaccaccttggatggggaaacttcagttaggccctttagtccggtatgtattgctaggaactcctcgttggtccaatccgcgaattcat  14401600               <----------DOF2              <---------ANAC58           <---------CCA1(2)      <---------ZAT2     ------>MYB83        <----------DOF2        ------->TEIL                             <---------HSFB2a(2)     ------>MYB46(1)---------->ID1    <---------ARR11(3)--------->ARR11(3)<---------ANAC58        <-- -----WOX13(1)<---------ANAC58        --------->ARR11(3)<---------ARR11(3)<---------ANAC58   <------- -->ATHB12 ---------->ID1<---------DAG2      <---------ATHB12        --------->ANAC46    --------->HSFB2a(2)   tgacaccaagcttgtagcttttgttcccttttttgttgaagttctcaatgaacttcaagttcttcttaaacacatcgcgtctcatatttttctcgagctc  14401700                                                            --------->HSFB2a(2)                                                            <---------HSFB2a(2)       <---------ANAC46                                                        <---------At4g35610           <---------ANAC58                                                    <---------WRKY18(1)               <---------ANAC58                                                   --------->WRKY38(1)              ------->TEIL          --------->ANAC46                      --------->ATHB12                 --------->O2 --------->ANAC46                              --------->MYB46(3)                --------->ANAC55(2) --------->ANAC58                              <---------ATHB12                  <---------O2  ------ --------->ANAC58                             -------->P--------->At4g35610      <---------ANAC55(2) -------REM1(2)                              --------->WOX13(1)---------->DOF2   <---------REM1(1) --At4g35610                         <---------YAB1--------->WRKY12      <---------SPL7       <------   atcacggtattcacgagaaaatcgagccatccattgctcatgtttatcaaccattgactgctcgcgaaagatgacagtacgagacgtagcttgagagatt  14401800                                                                                   <---------YAB1                                                                                 --------->YAB1                 --------->YAB1                                               --------->YAB1                 --------->ATHB12                                             <---------ICU4                 ----------->GT1                                             --------->AHL20(2)        --------->REM1(2)                                                    <---------AHL20(2)      --------->LBD16                                  <---------TOE1(3)     --------->ICU4     <---------ANAC55(2)                   <---------WOX13(1)<---------HSFB2a(2) <---------ICU4     ----------->GT1                     --------->ATHB12    --------->HSFB2a(2)--------->ICU4 --->GLK1(2)    <---------YAB1          --------->ICU4 <---------TOE2(3)     <---------ATHB51 ---GLK1(2)     --------->ICU4          <---------YAB1 --------->MYB59   <------ZmHOX2a(1)   ctgaaacccgtgaaaagaatgattaaaacagtgaccaataccatgattgatgccatttaggttttggaaaatagaggaaataattatgtttttaatatgg  14401900                  <---------ANAC46                  <---------ANAC58               --------->WRKY38(1)            <---------ANAC46                                            <------------CBF      <---------AHL20(2)                                               <------ZmHOX2a(1)     <---------YAB1        --------->ALFIN1                           <---------YAB1      <----------   --------->ATHB12      XXXXXXXXXXXXXXXXXXXX>MIR418        <---------AHL20(2)      --------->GLK1(1)  --------->ICU4  <---------ANAC58                        <-----------TBP           <---------GLK1(1)  <---------YAB1<<<<<<<<<<WRKY63     *TSS             ----------->GT1<---------TOE2(3) ------------>CBF   gcttatgattaatggtgttgacttgtaatgtggtgatgaagtgagaatagaaggaatagtatttatagatttaggattgaaccatgaaatccaattgtat  14402000                                                              --------->At5g28300                                                              --------->LBD16                                                             <---------ANAC46                                                           ------>NtERF2                                    ----------->GT1        <---------RAP2.3(1)                               <---------ANAC46       <---------ANAC58                              -                               <---------ANAC58       <---------ANAC58                            <--                               <---------ANAC58  <---------AtLEC2<---------ARR11(3)         <-------- --CBF                  <---------------AGL15<----------DOF2<------NtERF2           --------->ZAT14 -   gtaagaaaatgcaacttgacttgaatccatttggggtgatgttaatactttgcattacttgcgccgtgatatttggaagaaaaaacttcactattttttt  14402100                                       <---------ANAC58                                       <---------ANAC58                                   <---------ANAC58                                   <---------ANAC58                     --------->GLK1(1)                                <---------TOE2(3)       --------->CCA1(2)     <----------DOF2          --------->MYB52(2)       <---------ARR11(3) ----->ZmHOX2a(1)           <---------MYB52(1)         <---------ARR14(2) -------LBD16             <---------ANAC58             --------->ARR14(2)  --------->YAB1 -AHL20(2)                <---------ANAC46        <-------TEIL  --------->YAB1                      < -------->LBD16           <---------ANAC58 <----------DOF2     <---------ATHB51                     -   tcctgaactttcttatatgcaatttgtttcgtttgtggtttgcttctttgggttcaatatatgcaattatactgaaatcaaaatcgaaaacctcttgtct  14402200                                          <---------ANAC55(2)                               <-------MYC3                               ------->MYC3                            <---------ALFIN1                     --------->CCA1(2)    --------->ANAC55(2)                                       <                 <---------TOE2(3)        <---------ANAC58                                         <-              --------->AHL20(2)          <---------ANAC58                <---------TOE2(3)        <-              <---------AHL20(2)       <--------P                        ---------->DOF2           --      <---------ATHB12     --------->ANAC46     ------>ZmHOX2a(2)   --------->ICU4<----------DOF2<---    --------->WOX13(1)   --------->ANAC46--------->MYB52(2)       --------->YAB1 --------->TOE2(3) <- ---------MYB46(3) --------->YAB1     <-------GAMYB            ----------->GT1   <---------DAG2 <---- ---------->GT1<---------AHL20(2)    ----------->GT1          ---------->ID1  <-----------GT1  <-----   agtggttaatcaagaatttaatgatatacaccacgtttggggttacttgatcgtcgattgttttgttgtaataactaaagtaacctttttcagtttttgg  14402300          --------->AHL20(2)          <--------ATHB1          --------->ATHB51          <---------ICU4          <---------AHL20(2)    --------->ANAC55(2)    <---------ANAC55(2)                                                   <---------GLK1(1)    ----------->GT1                                                       --------->GLK1(1) -------GAMYB   <---------TOE2(3)                              <---------AHL20(2) -----MYB46(1) ---------->DOF2         --------->ANAC46        <---------AHL20(1)                ---- -----MYB83   <---------AHL20(2)       --------->ANAC58        --------->AHL20(2)               <---- ------->MYB52(2)     <---------HSFB2a(2)          ------>ZmHOX2a(2)   --------->ANAC58        <----- -----P  <---------ATHB51     <-----------HVH21  --------->ARR11(3)    --------->ANAC46 --------->ANAC58 --------MYB46(3)     --------->HSFB2a(2)        <---------ARR11(3)    --------->ANAC58 --------->ANAC58 ---GAMYB--------->ICU4       --------->LBD16--------->YAB1    --------->AHL20(1)   --------->ANAC58 ----MYB46(3)<---------AHL20(2)        --------->ANAC58       --------->AHL20(2)    --------->ANAC58   ttggttatgtaataatttaaagttctataacccgtcgaaacacgaattcatgatcttggtccaattttatttcaagaaatctcaccaagtaagctattta  14402400  Previous    Next  AGI:  At2g34080.1    Description:  cysteine proteinase, putative. similar to peptidase C1A papain family protein [Arabidopsis thaliana] (TAIR:AT1G29090.1); similar to cysteine proteinase [Lotus japonicus] (GB:BAF56428.1); similar to cysteine proteinase [Lotus japonicus] (GB:BAF56427.1); similar to cysteine proteinase precursor [Ipomoea nil] (GB:BAF46311.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide (InterPro:IP Range:  from: 14400260    to: 14401937    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version