Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->HSFC1(2)                                                             --------------->AGL15      --------->HSFB2a(1)                                                            <---------------AGL15 --------->DOF2                                                             <---------ARR11(3) ---ZAT2         ----------->RAV1(1)                                        --------->ARR11(3) -->ZAT2    ----------->RAV1(2)                                          --------->AHL20(2) ---O2<---------HSFB2a(1)     <---------TOE2(3)                        --------->TOE2(3) -->O2<---------HSFC1(2)      <---------TOE1(3)                        <----------DOF2 ---->RAV1(2) ------>ZmHOX2a(1)                            ---------->DOF2 <---------CCA1(2)     ---- -ALFIN1    =================RAV              <---------ANAC55(2)   <---------ARR11(3)          -----   ggcaaagaaacttctcctgcaacaattttgttaagggtttgaactaatacataaatagcttcaaagacgagaactttaaatctttcgctcatattggaat  14366500                --------->AHL20(2)                <---------AHL20(2)                                                     --------->ANAC58            <---------YAB1                             <---------AHL20(2)              --------->ANAC58            <---------ATHB12                  <---------ICU4                ------>MYB46(1)        --     <---------ANAC58                         --------->YAB1                ------>MYB83     --------     <---------ANAC58                     <-------TEIL --------->AHL20(2) <---------MYB59 --------->WOX13(1) ----->ATHB12--------->YAB1           --------->ARR11(3)           --------->ANAC58   --------->DAG2 ---->ICU4  --------->ICU4            <---------ARR11(3)           --------->ANAC58  ---------->DOF2-   gatttgtgcttgcaatgataaatttcaaaattgttccaaagatgttcatcatcagatttatatgagactaagcaaaccaaactttcgaaaagcaattaca  14366600                                                                                           <---------                                                                                         --------->ZAT2                                                                                         --------->At4g35610                                                                                         <---------At4g35610                                                                                         <XXXXXXXXXXX                                                                                         <XXXXXXXXXXX                                            --------->ANAC58                             <XXXXXXXXXXX                                            --------->ANAC58                          <---------ZAT2                                     <---------ICU4<-----------GT1                    <---------At4g35610 --------->RAV1(2)           --------------------->WRI1                               --------->At4g35610 ->YAB1                 <---------ARR11(3)  --------->ANAC46                     --------->ANAC58 -------->TOE2(2)       --------->ARR11(3)  --------->ANAC55(1) ------>ZmHOX2a(1)--------->ANAC58   aacctgagtgagtagacaatgtggaagacctcttagtaagaatcacacgcaaatcaccatcgtctccttcgaagagacatatcaagacagcagctttctt  14366700                                         <---------TOE2(2)                                       ------->MYC3                                       <-------MYC3                                      <---------O2                                      --------->TGA1a                   --------->ANAC58                                      <---------TGA1a                   --------->ANAC58                                      =============MYC_MYB        <---------ANAC58                ------>NtERF2         ===================================bZIP_DOF             --------->LBD16          --------->O2                <---------ANAC58           <---------LBD16          --------->MYB52(1)            <---------ANAC46           ----------->RAV1(2)      ------>MYB46(1)           <----------DOF2    <-----------ARR10          --------->MYB52(1)        ------>MYB83             <---------ANAC58   <---------At4g35610     ------->TEIL                --------->ANAC58            <---------ANAC58   --------->At4g35610 -DOF2 --------->AtMYB61         --------->ANAC58     ----------->RAV1(2)   --------->ANAC46 XXXXXXXXXMIR319A/B         --------->LBD16<-------GAMYB------>ZmHOX2a(1)   --------->ANAC58 XXXXXXXXXMIR159C           ------>ZmHOX2a(1)      <---------GLK1(1)    --------->ANAC46 XXXXXXXXXMIR319C      <---------GLK1(2)--------->ALFIN1<-----------RAV1(1) --------->ANAC58        <   cggtctgaacctcaccggagccatagattcctgaaacccaacgtgggttatcgatttcctggtgctttccttgtacgcaagcagctcttccctctcgtcg  14366800                                                                                                   <-                                                                                                <----                                                                                                -----                                                                                                <----                           --------->ANAC58                                                     -----                 <---------ANAC46                                                               <----                 <---------ANAC58                                                             <------                <------NtERF2                                                                 <------               <---------RAP2.3(1)                                                           ------>NtERF2               ------>NtERF2                                                                ---------               <---------DEAR3(2)                                                           <--------              <---------DEAR3(1)       ------>NtERF2                                        <--------              <---------RAP2.6(2)   <---------ATERF1(1)                                     <--------              <---------ANAC46    ----------->RAV1(2)                                       ---------              <---------RAP2.3(2) <---------At4g35610                                      <------NtERF2              --------->DEAR3(1)  <---------ZAT2                                          ------>NtERF2             --------->RAP2.3(1)  --------->ZAT2                                         ----------->HVH21             <------NtERF2 --------->ANAC46                                              <---------DEAR3(1)             --------->DEAR4(2)<---------ZAT2                                            <---------RAP2.3(3)             --------->ATERF1(1)  --------->At4g35610         <------ZmHOX2a(2)          <---------RAP2.3(2)            <---------RAP2.3(1)----------->RAV1(2)            --------->CCA1(2)         <------NtERF2            <---------DEAR4(2) --------->ZAT2                --------->ARR11(3)       <---------DEAR3(1)            <---------ATERF1(1)<---------At4g35610           <---------ARR14(2)      <---------MYB52(1)           <---------RAP2.3(2) --------->At4g35610           <---------ARR11(3)     <-------GAMYB <--           <---------DEAR3(1) ------->TEIL                   --------->ARR14(2)     =================       ---------->DOF2     --------->ANAC58            <---------HSFB2a(2)  =========================  ----------->TGA1      <---------REM1(2)              --------->HSFB2a(2)  <---------DAG2<---------ATERF1(1) ------ZmHOX2a(1)<---------ANAC58<-----------RAV1(1)--------->GLK1(2)       <----------DOF2--------->ATERF1(1)   aaggatgacgaaagcggcggcttgtatacacgcagctgctgcgccaaggctaagagtctggaagatccaaaattgaagcttttcgccgttggcgacgcgg  14366900 --------At4g35610 --NtERF2 ------>RAV1(2) -----ZAT2 ---->At4g35610 -----At4g35610 ---RAP2.6(2) ---DEAR3(1)                                    --------->ANAC58 >DEAR3(1)                                      --------->ANAC58 -O2                                          <---------MYB52(1) -bZIP60(2)                                  --------->At4g35610 -TGA1a ------>NtERF2             ----------->RAV1(1) >O2   --------->LBD16   --------->At5g28300 <---------At4g35610           --------->MYB52(1) -------MYB46(3)      <---------ZAT14        <------NtERF2               ------------>CBF =MYC_MYB             --------->ZAT14      --------->ZAT18      ---------->DOF2         ------------>CBF =bZIP_DOF         <------------CBF        <---------ZAT18   <----------DOF2       <----------DOF2   ctgatgctcccgacttcatggaattgcagtgaattacaacagttgtccgctagccaaggctcgcttgaaaggcagaccaatggaacttttggcaatatga  14367000                                            <--------P                                              <                                           <-------GAMYB                                           <-                                      <---------ARR14(2)                                          ---                                   <---------TOE1(3)    ------>ZmHOX2a(1)                    --------                                   <---------TOE2(3)  --------->SPL7                <---------LBD16<-                              <------MYB46(1)       <---------RAP2.6(3)             --------->SPL7---                              <------MYB83<---------MYB46(3)        --------->At5g28300     ---------                             --------->MYB59<---------WOX13(1) <---------SPL7   <---------------AtSPL3                           <---------MYB52(1)       <-----------HVH21 ---------->DOF2 ----------->GT1              <----------DOF2--------->MYB46(2)     <---------SPL7 ----------->GT1<---------SPL7  <--              <---------DAG2 --------->MYB111(1)<-----------GT1----------->HVH21<---------------AtSPL8         ---------->DOF2   <<<<<<<<<MYB98<---------AtMYB61  ------>NtERF2       <---------ZAT6<------   cacttaaaaaaaaaagctttttgccctaagttaggttgaggttttggttgataccgtcctgccgagggacggtaaagaaatagtggtacggagaaaaagg  14367100   --------->MYB46(3)  --------->SPL7 ---------SPL7 --------ANAC58 ------------>AtSPL3                                                     <---------MYB46(3) ->DAG2                                                                  ----------->GT1 --------ANAC58                                                     ---------->DOF2 ------------>AtSPL8                                             <---------WOX13(1) ->DOF2                 --------->AHL20(2)                      <------------CBF -----TEIL     --------->ANAC55(2)      <----------DOF2    <------------CBF    ---------->DOF2 ---------AtSPL8        <---------AHL20(2)              ------------>CBF--------->ALFIN1          <--   tccgtaccaccattttctcgtaatattaaaaaatatgttctactttgtgatactaatcggcaattggattgaaagtggttcaaaagtcaaaacttgagtt  14367200                                                              ----------->GT1                                                              --------->ANAC58                                                           ====================HOX2a_HOX2a                                                           <------ZmHOX2a(1)                           --------->ZAT14       <---------AHL20(2)                    <------MYB83                           <---------ZAT14      <---------YAB1--------->ANAC58         <------MYB46(1)                           --------->ZAT18    --------->AHL20(2)        <------ZmHOX2a(2)                       ------->TEIL           --------->YAB1---------->DOF2          <--------P                     --------->YAB1  ------->TEIL--------->AHL20(2)    --------->ARR11(3)      ------ -------AtLEC2  ------------>CBF <---------TOE2(3)    --------->ATHB12 <---------ARR11(3)   <--------   gcatagcctagaaaaacttacaatgaaactacactaatgtactccaaattataaattgataggaaagaaacaagatcaaaacttagggtaggcatgtcaa  14367300                                               <----------DOF2                                            <---------ARR14(2)                                            --------->ARR14(2)                           --------->YAB1   <---------ARR11(1)                          <---------ATHB12  ------->TEIL   ------->TEIL                      <-------                          <------ZmHOX2a(2) --------->GLK1(2)     --------->HSFB2a(2)       <-------GAMYB                  <---------KAN4(1)        <---------CCA1(2)   <---------YAB1       <---------YAB1 --->WOX13(1)     --------->KAN4(1)        <---------ARR14(1)<----------DOF2   <---------GLK1(2)<---- ---HVH21 --------->WOX13(1)         --------->ZAT6<---------LBD16<---------HSFB2a(2)      ----------   tcggattaatgtcaatcggattaatccgatcatcgtctaagactcgaatcttttggggatggacttttatagaaaacgatagaattttgtttggggttac  14367400  Previous    Next  AGI:  At2g33980.1    Description:  ATNUDT22 (Arabidopsis thaliana Nudix hydrolase homolog 22); hydrolase. Identical to Nudix hydrolase 22, chloroplast precursor (NUDT22) [Arabidopsis Thaliana] (GB:O22951;GB:Q9C5F2); similar to ATNUDT15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15), hydrolase [Arabidopsis thaliana] (TAIR:AT1G28960.5); similar to ATNUDT15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15), hydrolase [Arabidopsis thaliana] (TAIR:AT1G28960.3); similar to ATNUDT15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15), hydrolase [Arabidopsis thaliana] (TAIR:AT1G28960.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO66349.1); contains InterPro domain NU Range:  from: 14356843    to: 14366919    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g33990.1    Description:  IQD9 (IQ-domain 9); calmodulin binding. similar to IQD10 (IQ-domain 10), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G15050.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96454.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 14367355    to: 14369320    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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