Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------ANAC58    --------->At4g35610 ---------ARR14(2) -----------ARR10 ------>TEIL ---------ARR11(1)                                            ------>ZmHOX2a(1) -------->ARR14(2)                                   <-----------HVH21 -------->GLK1(2)                                   --------->ANAC46 --------GLK1(2)                                    --------->bZIP60(2)                        <----- --------ARR14(1)                                 <---------ALFIN1     <-----------GT1      --------- ---ARR14(2)                                   --------->ANAC46   --------->AHL20(2)        <-------- -->GLK1(2)<---------ANAC58                   ------>ZmHOX2a(1)   <---------AHL20(2)  --------->CCA1(2) -->ARR14(2)<----------DOF2            --------->ZAT14       --------->TOE2(3)   <---------At4g35610   cgaatctgctctggctttggattccatcttggttttggctctggactcctctccacttcacatcctaaaaaattcacaatctcatcagataagagttctt  14350500                                                                  ================================HOX2a_HOX2a                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                                                                 =================================HOX2a_HOX2a                                                                --------->ARR11(3)                                                                <---------ARR11(3)                                                                <---------ARR14(2)                                                      ---------->DOF2      --------->At4g35610                                             --------->At4g35610--------->ARR14(2) -----DOF2                                 ==============================HOX2a_HOX2a                < >ARR11(3)                                 =============================HOX2a_HOX2a                 - -ARR11(3)           ----------->GT1       <------ZmHOX2a(1)  ----------->ARR10            <------ZmHOX2a(1)   taaaacaaaatttagttttgaattggtaaatatgtagaagtagaaggacctgaagagaaaggagaagatcggtgagaagcagaaggcaagagaggagagt  14350600                                                                                                <----                                                                                           --------->LBD16                                                                                           --------->At4g35610                                                                                         ------>ZmHOX2a(2)                                                                                 <-----------GT1-----               --------->ATHB12             <---------ANAC58            --------->ICU4  <------ZmHOX2a(2)     <-----------RAV1(1)                    <---------ANAC58       --------->ANAC58    --------->ARR14(2) ---------bZIP60(1)                        --------->ATHB12        --------->ANAC58    <---------ARR14(2) -------->bZIP60(1)      <---------TOE2(3)<---------YAB1         ---------->DOF2--------->AHL20(2)   tgatgtcatgttgccattgatggggatgaggtttggacttgaacatgcttggccagtgtctattcgaagaagccataactaattaactcgatccgcagaa  14350700                                                             <---------ANAC46                                                             <---------bZIP60(2)                               <---------TOE2(3)   --------->YAB1                            <---------WOX13(1)    <---------YAB1                          --------->ATHB12        --------->ICU4                         <---------YAB1      --------->bZIP60(1)                         --------->ICU4      <---------bZIP60(1)      --------->DAG2     --------->ANAC58                       --------->YAB1     <---------YAB1  ----------->HVH21              --------->ANAC58      ------->TEIL    <---------YAB1    --------->YAB1  --------->bZIP60(1)     <------ZmHOX2a(1)   - -----ZAT14           --------->ICU4   --------->ICU4<---------YAB1  ---------->DOF2 --------->CCA1(2) ---->ZAT14         --------->YAB1    <---------WOX13(1)<---------bZIP60(1)  <------ZmHOX2a(1)   <---   cacagatgtatgtgtatgcatatgatgatgattgatgttgaatgatgatgtgatgatgatgtgatgtgtcaaaaagagaggaggaagagacagggaacag  14350800                                                                                          ------>MYB83                                                                                          -------->P                                                                                          ------>MYB46(1)                                                                                         ------>MYB83                                                                                         ------>MYB46(1)                                                                                       <---------MYB111(1)                                                                                       <---------MYB59                                                                                       <---------MYB55(2)                                                                                       --------->MYB46(3)                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                      --------->ANAC46                                                                                     -------->P                                                                                     ------>MYB46(1)                                                                                     ------>MYB83                                                                                    --------->MYB55(1)                                                                                   <---------MYB111(1)                                                                                   --------->AtMYB61                     <---------AHL20(2)                                            --------->MYB46(3)             ----------->GT1                                                       <---------MYB59            ----------->GT1      <----------ID1                                    <---------MYB55(2)          ---------->DOF2----------->GT1                                           <---------MYB111(2) ---------->GT1     --------->YAB1                       *TSS                      <---------MYB46(2) ------GLK1(2)     --------->AHL20(2) ---------->DOF2 <----------DOF2             <---------At4g35610   aatggctaaatggaaagataaataaaaatgtgaatagggcaaaagggttacgacctctttctctccctcttatagcctctcttcacctacccaacctgtt  14350900                                    ---------->DOF2                                   <---------AHL20(2)                              --------->AHL20(2)                             --------->AHL20(2)                             <---------AHL20(2)                             <---------AHL20(1)                             --------->AHL20(1)                 <----------DOF2  <---------AHL20(2)                                     ------->TEIL             <---------CCA1(2)<---------AHL20(2)           --------->ANAC46      <---------ARR11(3)      <-------TEIL       --------->AHL20(2)                <-----------GT1      <---------CCA1(2) <---------CCA1(2)     --------->TOE2(3)            <-----------GT1   <----------DOF2   <---------CCA1(2)   ttcatatattcattcatctcttttacataaatttaatttaaagtctcacccatatttctatacaccatttctctttctctctatatctatgtatctatct  14351000                                --------->ARR14(2)                        --------->ICU4                      --------->YAB1                     <---------YAB1                                                       --------->AHL20(2)                    <---------ARR11(3)                                  --------------->AGL15              ------->TEIL <---------ANAC46  <----------ID1            ==============================             <---------CCA1(2)  <---------ARR14(2)                     <-----------------AG <---------ANAC46   <<<<<<<<<<GT-1         ---------->DOF2   --------->ZAT6              <---------ATHB12   atgatgtatagatgtgtatctatatcattatgtgtatatgtttagtaaagacaaaaaaaactatcactacttctcttgtttagggaatcaaatgaattag  14351100                                                                    <---------YAB1                                                                 --------->AHL20(2)                                 ---------->DOF2             <---------ANAC46                          ----------->GT1                    <---------ANAC55(2)              ------>ZmHOX2a(1)<---------YAB1                <---------ANAC58              --------------->AGL15                          <---------ANAC55(1)              <---------------AGL15                          <---------ANAC58       --------->WRKY18(1)             ----------------->AGL2  --------->AHL20(2)<---------YAB1    <-----------GT1      <------ =============================MADS_MADS     <------ZmHOX2a(1)--------->ANAC55(2)--------->ZAT14------   agaagtaggctaaatcctattaacagaaatgttataaaagaaaataggaacactgttttcattacgttttattattaactacttcagtcaaacagtatga  14351200                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                                    --------->AHL20(2)                                                  ----------->GT1                                                 --------->DAG2                                                ---------->DOF2                                           <---------------AGL15                      <---------ANAC46                                           --------------->AGL15                    =================     <---------ANAC58               --------->AHL20(1)   <---------AHL20(2)         ------>ZmHOX2a(2)     <---------ANAC58               --------->AHL20(2)   --------->AHL20(2)   <----------DOF2 ---YAB1         <---------AHL20(2) <---------AHL20(2)   --------->AHL20(1)--------->ARR11(3) --->ATHB12     --------->AHL20(2) --------->AHL20(2)    <---------AHL20(1)<---------ARR11(3)    <---   tttagttgcatacttgcattaaatagttttgaacaaaaaaaattgcattaaaaagtaaatttattaattctatagaaggtctttgatcgcttatatatag  14351300                                                                   --------->AHL20(2)                                                               --------->AHL20(2)                                                        <---------ATHB12                                         <---------ANAC46   --------->YAB1                          <           <----------DOF2               <---------ANAC58  <---------YAB1                 <---------ZAT18     <------ZmHOX2a(1)                   <---------ANAC58--------->YAB1                --------->MYB59 <---------YAB1                          <---------AtLEC2<---------ICU4                --------->MYB52(2) ===========HOX2a_HOX2a                <---------YAB1   --------->ICU4               <--------P    <- ------GLK1(2)                      --------->ARR14(2)  <---------ATHB51     <----------DOF2  <------   attatgaggagcactttgacattttagatttgaatccagttttgcttgtcatggttcaattatgataaaataaaaactgttttaggggttagttcccttt  14351400  Previous    Next  AGI:  At2g33880.1    Description:  WOX9 (STIMPY); transcription factor. Identical to WUSCHEL-related homeobox 9 (WOX9) [Arabidopsis Thaliana] (GB:Q6X7J4;GB:O23662;GB:Q8GX13); similar to WOX8 (WUSCHEL-related homeobox 8), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G45980.1); similar to SISTER OF EVERGREEN [Petunia x hybrida] (GB:ABO93067.1); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Homeobox; (InterPro:IPR001356) Range:  from: 14348509    to: 14350857    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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