Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------MYB46(3)                       --------->ALFIN1 <---------ANAC58                    <---------DEAR3(1)  <---------ANAC58                         ------>MYB83            --------->At4g35610         <---------ANAC46                       --------->AtMYB61           --------->GLK1(2)       <---------ANAC58                           --------->MYB46(3)          <---------GLK1(2)        <---------ANAC58                  <------ZmHOX2a(2)--------->AHL20(2)       --------->HSFB2a(2)   <---------ANAC58                   <-------TEIL<-----------GT1       <-----------RAV1(2)   <---------ANAC46   ============================HOX2a_HOX2a---------->DOF2       <---------HSFB2a(2)   <---------ANAC58   ------>ZmHOX2a(1)   --------->AGP1--------->MYB46(3) -ZmHOX2a(1)<---------At4g35610    <---------ANAC46            <-----------HVH21 ------>MYB46(1)   gagacagacccagaagctgaagacggtgtttgcgtttgcgtttcgtcttcctccgtctccatcacgttcagatcgattaaaccacccattaaagagagag  14335700                          <---------YAB1                   <----------DOF2                <---------ARR11(3)  ----------->GT1                     <-----------GT1                --------->ARR11(3)---------->DOF2                       <---------At5g28300            --------->CCA1(2) ---------->DOF2                       <----------DOF2  ---------->DOF2          --------->YAB1--------->YAB1                        <---------ICU4     --------->At4g35610       ---------->DOF2 <---------YAB1                <------ZmHOX2a(1) <-----------GT1           <---   aaacagagataaagataagagctttattataagaaagaaagaaaaaaaactcagaggagtttcttcatgacttttaccctctcagccaaaagaagagaga  14335800                                  ----------->GT1                                --------->REM1(2)                               --------->ALFIN1                                             <--------                              --------->LBD16                                               ---------                             <---------ANAC58                                          --------->ARR11(3)            --------->ICU4   <---------ANAC58          <---------TOE2(3)               <---------ARR11(3)     --------->ZAT14    ---------->DOF2               ---------->DOF2          --------->DAG2     <---------ZAT14  <----------DOF2             <---------------AGL15       ---------->DOF2 ------ZAT14<---------YAB1   <---------ANAC46<----------DOF2            ----------->GT1<---------GLK1(2)   gtagtagcacagtgatgagtgagtctttaagccgtggagaaaaaaaacttttctattaaagaaaaaaaaaaaactagaaaaaaagtttagatttttaatt  14335900                                                                                                 <---                                                                                              -------                                                          --------->ZAT18                   ---------                                                          <---------ZAT14                   <--------                                                          --------->ZAT14              --------->TGA1a         ---------->DOF2                                  <---------ZAT18              --------->O2     --------->TOE2(3)                             <---------ZAT14                     ==============     --------->YAB1                                --------->ZAT14                 <---------At4g35610    ----------->GT1                            --------->ZAT6                      --------->At4g35610 -AHL20(2)                                    <---------ZAT14           --------->ALFIN1   <---------MYB46(3) >AHL20(2)         <------ZmHOX2a(1)          --------->ZAT14      ----------->RAV1(1) ==============   tggacaatgttaaaagagagaggagagagagaggtatcagagaaacagaacagtactgagtgctctctgcaacagtgaggctctctgctacgtctggtga  14336000          <---------ANAC58          <-----------RAV1(1)          <---------REM1(1)          <---------bZIP60(2)          <---------ANAC58          --------->ALFIN1          <---------ANAC46        <---------ANAC58        <---------ANAC58        <---------ANAC46       <---------AtMYB61       --------->ALFIN1      <---------ZAT14     --------->ALFIN1   <---------ANAC58   <---------ANAC58   <---------ANAC46               --------->ALFIN1   --------->ALFIN1      <----------DOF2 ==========================bZIP_DOF <---------ANAC46       <---------DAG2 <---------TGA1a      --------->ARR11(3)                                                 <----------DOF2 ------WOX13(1) <----------DOF2 <---------ANAC46                            <---------WOX13(1) ---->HVH21    <---------ANAC46 <---------ANAC58                           <------------CBF  -------- >At4g35610    <---------ANAC58 <---------AtLEC2              --------->ARR11(3)        <---------ANAC58 -At4g35610    <---------ANAC58 <---------ANAC58              <---------ARR11(3)        <---------ANAC58 ==========bZIP_bZIP  <---------ARR11(3)                      <---------GLK1(2)     <----------DOF2 ==========================bZIP_DOF--------->REM1(2)  *TSS  ----------->ARR10 --------->ATHB12 <-----   ctgatgtgtgtggtgtggcttttagaccttttgtgcgtggagagagagacattagatgggattagatttttgaaatagattgatttctttgctttctctt  14336100                                                                         <---------AHL20(2)                                                                         --------->ATHB51                                                                         <---------ICU4                                                                         -------->HAHB4                                                                         --------->ATHB12                                                                         -------->ATHB1                                                                        --------->ICU4                                                                        <---------YAB1                                                                        <---------ATHB51                                                                      <---------ICU4                                                                      --------->YAB1                                                                      --------->ATHB51                                                                      <--------HAHB4         <---------ARR11(3)                                           <--------ATHB1         --------->ARR11(3)                                           -------->HAHB4       <---------YAB1                                                <---------YAB1     --------->YAB1                                                  <---------ATHB51     <---------ICU4                                                  --------->AHL20(2)    <---------YAB1              ------------>CBF                     --------->ICU4    --------->ICU4       <---------GLK1(2)                         --------->YAB1 <---------AHL20(2) ----------->RAV1(1)                           <---------YAB1 <---------YAB1     --------->MYB52(1)        <------------CBF   --------->AHL20(2) --------->AHL20(2)--------->ANAC46  --------->YAB1    <---------------AtSPL8         <---------ARR14(2) ------->AGL15   --------->ANAC46   --------->ICU4     <---------------AtSPL3         --------->ARR14(2) -----DOF2  <----------DOF2  <----------DOF2<---------YAB1   <---------ZAT6<---------YAB1 -----------   tatattattattatcttttacacaacagtttctttgcaatgttgatactattggattttagtactgatataataattattgttacaagtatatggttttt  14336200                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                      --------->CCA1(2)               --------->YAB1                                            <---------AHL20(2)              <---------AHL20(2)                                         <---------YAB1             --------->AHL20(2)    <---------ICU4                       --------->AHL20(2)        <---------AHL20(2)      --------->YAB1                        <---------YAB1    <---------ICU4   <---------ARR14(2)         <---------MYB52(1)  --------->YAB1    --------->ATHB12 --------->AGP1--------->ATHB51    <----------DOF2--------->ICU4    <--------HAHB4   --------->ARR14(2)        <-------GAMYB        <---------ICU4                 --   <---------ATHB12  <---------ARR11(3) <---------ANAC58            <--------HAHB4<---------YAB1  --- --------->WOX13(1)  --------->ARR11(3) <---------ANAC58     <----------DOF2      <---------AHL20(2) >GT1   --------->AHL20(2)  ---------->DOF2   <-----------RAV1(1)  <---------ATHB12   <-----------RAV1(1)   agttaatcatttatatataataagatctacaaaagaataatttcgtctctgttgtctctttgtctttgaatcatttttattgatattattgtgggagaaa  14336300                                                                          --------->AHL20(2)                                                                        --------->AHL20(2)                                                                       <--------HAHB4                                                                       --------->ATHB51                                         <---------YAB1                <---------ICU4                                       --------->ATHB12                --------->YAB1                                       <---------ICU4                 --------->ICU4                                      --------->ICU4             <-----------GT1             <------NtERF2            <---------YAB1       <---------ATHB12<---------AHL20(2) -------->DOF2              <---------WOX13(1)         --------->AHL20(2)<---------YAB1 ------>AHL20(2)   <----------DOF2 ------->TEIL    ----------->GT1    <---------YAB1             <---   taaaagaatactggtggcatacttttagggattgatgcacattattagtgaaatagtttaaatcatttatccattattatatgactagttcatgtggttt  14336400                           <---------MYB52(1)                          <-------GAMYB               --------->CCA1(2)              --------->ARR11(3)              <---------ARR11(3)              --------->ARR11(1)              --------->ARR14(2)                                                                   --            ----------->ARR10                                                                 -------         <---------ANAC46----------->GT1<<<<<<<<<<<<<<<<<LFY                              --------->ARR14(2)    <-----------RAV1(1)--------->MYB52(1)<-------TEIL                <----------DOF2      <---------ARR14(2) ------ANAC46 <---------ARR14(2)    ---------->DOF2         <----------DOF2            <---------ANAC46   tgtgttttgtggcgaagatttggactaccgttatattctaaagtacattgggggatagttttctttcatgcctttgattttcagtagtttagtatatggt  14336500                            <-----------GT1     <---------YAB1                        <---------YAB1<---------YAB1   <---------YAB1   <---------ARR14(2)      ----------->GT1  --------->AHL20(2)     --------->YAB1            --------->ARR14(2) -------->DOF2         <---------AHL20(2)    <---------AHL20(2) <---------MYB52(1)            ------- ---->GT1         <---------YAB1  <----------DOF2<---------ICU4<-------GAMYB      <XXXXXXXXXXXXXXXXXX   gaaaagggttgtatatttttctgattaaaattacacctttgtgataaataatcagtgtttattgctgttattcgaattcggaactagttagatggatttt  14336600  Previous    Next  AGI:  At2g33860.1    Description:  ETT (ETTIN); transcription factor. Identical to Auxin response factor 3 (ARF3) [Arabidopsis Thaliana] (GB:O23661;GB:O23670;GB:O81087); similar to ARF4 (AUXIN RESPONSE FACTOR 4), transcription factor [Arabidopsis thaliana] (TAIR:AT5G60450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66387.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Auxin response factor; (InterPro:IPR010525) Range:  from: 14332345    to: 14336054    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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