Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <----------DOF2                     --------->AHL20(2)                                 <---------ANAC58                     <---------AHL20(2)                            <----------DOF2      --------->ZAT14               <-----------GT1                                <------ZmHOX2a(1)         <-------TEIL         <---------ANAC55(2)                               --------->HSFC1(1)       --------->MYB59         --------->ANAC55(2)           <---------ANAC55(2) <---------HSFB2a(2)      <---------------AtSPL8      <---------ARR14(2)               --------->ANAC55(2) >>>>>>>ZML2  <---------ANAC58<---------ZAT14      --------->ARR14(2)               <---------ANAC46    <---------HSFC1(1)     <---------MYB52(1)     <------ZmHOX2a(1)      ---------->DOF2                --------->HSFB2a(2)   <-------GAMYB   tagtataggatacttattcacgtttaaatgtaaagaaattcacgtataaatgttttatgttctaggaggctttggcttttctcggttaagtacagtctat  14282500                             --------->AHL20(2)                             <---------AHL20(2)                           <----------DOF2                          ------>ZmHOX2a(2)                 <----------DOF2   <-----------GT1                              <----------DOF2         <---------ANAC46<------ZmHOX2a(2)                                  ---------->ID1       <---------ANAC46 <---------ARR11(3)     --------->ATHB12             <---------CCA1(2)    <-----------RAV1(1) --------->ARR11(3)  --------->TOE2(3)     <----------DOF2                ----   gactctatgttgtgggagtcttttgcgatctttaatttagccatttccttcattagcacctattcatgctttagccttgtagcttttagtttttggatgc  14282600                                           <-----------GT1                                       --------->ATHB12                                      --------->ICU4                             <---------LBD16   <----------DOF2                            --------->MYB52(1)--------->TOE2(3)          <---------AHL20(2)                         <----------DOF2----------------------->TaNAC69(2)            <---------At4g35610  --------->ALFIN1                      <-----------TBP  --------->MYB52(2)            <---------HSFC1(2)  <---------MYB52(1)      --------->ARR14(2)          <---------ZAT6            --------->HSFC1(2)  <-----------HVH21       <---------ARR14(2)  <------------CBF --->TEIL <--------P  ------->GAMYB   <---------YAB1   <---------MYB52(1)--------->AHL20(2)   acttagcctttggtagcttcttaacagcattaccggtgggatgattaacctttagccgtttctgaacacacctatttatattgttagtgttagtgtctaa  14282700                    <---------WOX13(1)                   <------------CBF                   <---------ANAC58                   <---------ANAC58               <------------CBF              --------->ATHB12                                                                   ----             <---------YAB1                                                        --------->ARR11(3)         --------->ANAC46                                                   --------->LBD16      ----         --------->ANAC58                                               <---------WRKY18(1)    <-----         --------->ANAC58                                               <-----------GT1        <-----         --------->ANAC55(2)                                          <----------DOF2          <-----         <---------ANAC55(2)                                        <---------At4g35610    <---------SPL7        <---------ZAT18                                        <----------DOF2     <---------ARR11(3)    <---------------AtSPL8       --------->AHL20(2)     <---------REM1(1) <---------LBD16<-----------    <---------------AtSPL3       ------------>CBF   <---------TOE2(3) <---------DAG2<------ZmHOX2a(2)  --------->YAB1  --------->ATHB12             --------->TOE2(3)    --------->At4g35610  --------->ALFIN1   acagtaatagtacgcatcattgattgtctatctaattcaataggtgttacattaaacgttgtagcctttcagctttaccggacaagatcatgtggtaccg  14282800                                                                                               ------                                                                                              <------        --------->SPL7                                                                        <------       ------>MYB46(1)                                                                        -------       ------>MYB83                                                                       --------->At5g28300       --------->MYB52(1)                                                                ------>NtERF2       -------->P                                                                        --------->RAP2.6(2)      --------->MYB55(1)                                                                <---------RAP2.6(2)      <---------SPL7                           <-----------GT1                          <---------ANAC46     ----------->HVH21                        --------->GLK1(1)                         <---------DEAR3(1)     --------->MYB46(3)                      ------->TEIL                               <---------ATERF1(2)    --------->DEAR3(2)                    <---------ANAC55(2)                          --------->RAP2.6(3) -->MYB83            <----------DOF2      --------->ANAC55(2)                     --------->DAG2   <- -->MYB46(1)       --------->HSFC1(2)    <---------TOE2(3)                       ---------->DOF2   -- ----MYB46(2)      <---------HSFC1(2)   --------->MYB52(1)                   ----------->RAV1(1)  <-- ----MYB59    <---------HSFB2a(2)  <---------AHL20(2)                     --------->YAB1--------->ATERF1(2) ----MYB52(2) --------->HSFB2a(2)  --------->AHL20(2)        <-----------GT1<----------ID1<------NtERF2 ----AtSPL3   <---------HSFC1(1)   ----------->TBP       ------->TEIL------------>CBF--------->ALFIN1   aaccagaccgaccggtctagaagctttcgattttcatataaataacgtatttccccatgaattttacaagtttcaatgacaacaaaagtggcggcaaatt  14282900          --------->ANAC58          --------->ANAC58   <---------ANAC58   <---------ANAC58  --------->At4g35610                  --------->ANAC58  <---------At4g35610                  --------->ANAC58 --->GLK1(2)                   ------>ZmHOX2a(1)                                  <---------YAB1 ---GLK1(2)                <---------ARR14(2)                                     <---------AtMYB61 ---ARR14(2)               --------->ARR14(2)                              <---------ANAC55(2) -->ARR14(2)             ----------->ARR10                                 <---------ANAC46    <----- --------At4g35610     <---------ZAT2---------->DOF2                       --------->ANAC55(2)<------NtERF2 ------->At4g35610   --------->HSFB2a(2)                                  <---------LBD16    -------- ---------RAV1(1)    <---------HSFB2a(2)               <-------TEIL    <-----------HVH21   <---------LBD16   ctgctgcttacgaagccatagttcgagcaggtcctcgtgtaaagcaacttcaacaagttcatgctcacctcattgtcacgggttatggtcgtagccggag  14283000                                                                                 --------->LBD16                                                                                <---------HSFB2a(2)      ---------->DOF2  <---------ANAC58                                         --------->HSFB2a(2) ----GLK1(2)           <---------ANAC58        --------->ARR14(2)      <---------MYB52(1) ->LBD16          <----------DOF2              <---------ARR14(2)------>ZmHOX2a(1)          ------>ZmHOX2a(1)   tctcttgacaaagctcattactttagcttgttccgctcgagccatcgcctatactcatcttctcttcctctccgttccccttcccgatgacttcctcttc  14283100                                                                ----------------------->TaNAC69(2)                                                 <---------ANAC58                                                 <---------ANAC46                                             <-------GAMYB<-----------HVH21                                       <---------AtLEC2<---------At5g28300                                   <----------DOF2    <-----------GT1                              <-                                  --------->TOE2(3)<---------ICU4                                 <--                              --------->WRKY12   <---------ANAC58                             -------                           <---------ANAC58 <---------ANAC58   <---------TOE2(2)              <------                           <---------ANAC46 <---------ANAC46   <---------TOE1(2)          <----------                           <---------ANAC58 <---------ANAC58<---------ANAC46          --------->LBD16   aattcagttatcaaatcgacttctaagttgcgtttacctttgcattgcgttgcttattaccgtcgtatgttatcttcaaacgtctctccgagtaactaca  14283200                             ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                           <---------ARR14(2)                           --------->ARR14(2)       --------->DAG2                         --------->DEAR3(1)        --------->DAG2                        <------NtERF2       --------->GLK1(2) ----------HVH21       ------>NtERF2 <---------ANAC58                         <---------LBD16 --------DOF2          <---------RAP2.3(1)  <---------ARR14(2)           <---------MYB46(3) -->ZAT14             <---------ANAC46      --------->ARR14(2) <-----------HVH21 ---ZAT14         <---------ANAC58   <---------ANAC58     <---------YAB1<---------AtMYB61           < -GT1             <---------ANAC58 ------>NtERF2  ---------->DOF2  --------->AtLEC2                 <   ctttcacctctgttatcaagtcttgcgccgatctctctgccttgagaatcggaaaaggtgttcattgtcatgcagtggtttctgggtttggattggatac  14283300                                                       --------->ANAC58                                                       --------->ANAC46                                                       --------->ANAC58                    <---------bZIP60(2)              <---------ALFIN1                    <---------ANAC58                <-------TEIL                    <---------ANAC58                --------->ZAT18                    <---------ANAC46             <------MYB83                                    <---                   ----------->STF1       --------->CCA1(2)                                    <-----              <---------AtMYB61          <---------ARR14(2)                                    <-----            <----------DOF2   ---------->DOF2    <------MYB46(1)                               <-----   <-------TEIL   <---------TGA2(2)      --------->ARR14(2)                                    <----- ---------ANAC58 ----------->TGA1   --------->ALFIN1--------->ZAT14                            <----- ---------ANAC58 ----------->HVH21--------->ALFIN1  <---------ZAT18                       <----------   ttacgttcaggctgctttggtgacgttttattcaaagtgtggcgatatggaaggtgcacgccaagtgttcgatagaatgcctgagaagtctattgtggcg  14283400  Previous    Next  AGI:  At2g33760.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G21065.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67121.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43706.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 14282876    to: 14284627    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version