Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   ----------->HVH21                                                             <------NtERF2                                                            ------>NtERF2                                                           <---------ANAC58                                                           <---------ANAC58                                                           <---------DEAR3(1)                                                        --------->ANAC46                    ---------                                                        --------->ANAC58                   <---------YAB1                                                        --------->ANAC58               <---------STY1(2)         <-----------GT1         <---------WRKY18(1)  <---------ALFIN1             <---------ZAT2<---     ------->TEIL               ----------->HVH21  --------->ANAC46                --------->ZAT2<---   <-------TEIL                 --------->WRKY12   --------->ANAC58                <---------At4g35610 ---->ANAC58                    --------->WRKY38(1)----------->HVH21               --------->At4g35610 ---->ANAC58 <<<<<<<<<TBF1 ---------->DOF2         --------->ANAC58  *TSS          --------->STY1(2)   tcaaatgcatttttcttcttctctctctcaaaagttgaccggcgagatgagaaacgacacggcgtctctgacttcttccaaacccagctagctataatgg  14245900       <---------ARR14(2)    --------->ANAC58    --------->O2                                                                        ----------->GT1    <---------ANAC46                                                    --------->ICU4  ------>ZmHOX2a(1)    --------->ANAC58                                                 <---------------AGL15    <---------ANAC55(2)                             <----------DOF2  --------------->AGL15 >YAB1 --------->ARR14(2)                    <-----------TBP        <-----------------AGL1 ------ANAC58                         <------------CBF              ----------------->AGL1 ------ANAC58<----------DOF2        <------ZmHOX2a(1)            <-----------GT1    --------->ARR11(3)   tttgccacgtatacactttaacttaactaatttgatcaggaattgttttttatacttttatttgttttctccccattatggacaaacatcctgtaatttg  14246000                                                                                      <---------WOX13(1)                                                                                    --------->ATHB12                              ----------->GT1                                   --------->ATHB12                          <---------YAB1                                      <---------TOE2(3)           <---------AHL20(2)--------->CCA1(2)                              <---------AHL20(2)    <-----------GT1     ---------->DOF2                                    --------->AHL20(2)  --------->YAB1     --------->YAB1         ----------->GT1            <---------TOE2(3) <---------TOE2(3)   ctaattatactatataatctcatttataaagatagaaaaaacaatagggagaaatatgtttctatttgacattaacatttaatgtttgattgagataatt  14246100                                                                          --------->AHL20(1)                                                                          --------->AHL20(2)                                                                          <---------AHL20(1)                                                                          <---------AHL20(2)                                                                          --------->ARR11(3)                                         <---------AHL20(2)               <---------ARR11(3)                                        <---------AHL20(2)           <---------AHL20(2)                                 <-----------GT1                     --------->AHL20(2)                            --------->AHL20(2)                     --------->YAB1                            <---------AHL20(1)                 --------->AHL20(2)                            --------->AHL20(1)                 <---------AHL20(2)                            <---------AHL20(2)         ----------->GT1   --------->AHL20(2)                 <---------AHL20(2)     --------->AHL20(2) --------->AHL20(2)     ----------->GT1 --------->AHL20(2) --------->AHL20(1) <---------AHL20(2)  <-----------GT1   tgaacaagagtaaaactattgaattaaaaatttattaacaaatttaatattagaaaactgttaaattaaaaataaatatattaacaaatcgaatttttgt  14246200                                                                             <-----------HVH21                                                                        ------->GAMYB                                                                       <------------AtMYB77                                                                      >>>>>>>>>MYB1                      <---------ANAC58                                >>>>>>>>>MYB2        --------->LBD16                      <---------ANAC58                         <---------ARR11(3)         --------->LBD16                  <---------HSFB2a(1)                       --------->AHL20(2)            --------->ANAC46                  --------->HSFB2a(1)                       <---------AHL20(2)----------->HVH21              ----------->GT1                ------>ZmHOX2a(1) --------->ARR11(3)        *TSS            ---------->DOF2                 --------->TOE2(3) <---------CCA1(2)          <------NtERF2   gaatttcagaaataaaaagaaaattcttgtgtaagtctaaaccagtccttaatgttcttcatttatatctctaactgcctgtgacttcgtccccgagaga  14246300             <---------AHL20(2) <----------DOF2            --------->AHL20(2) <---------DAG2                                                    ----         --------->YAB1 <---------At4g35610                                              ---------->DOF2       <---------WOX13(1)    ------->TEIL            ------>ZmHOX2a(1)                  --------->WRKY18(1)     --------->ATHB12   --------->At4g35610      <-----------GT1                       <--------ZAP1<    <---------YAB1---------->DOF2         ------>ZmHOX2a(1)  <---------ZAT18           <-----------HVH21   cactctctgattgataaaattcaagcagatgaaccttttaagtcctgaaattttcctcactagtcgacttaatcaagtgctatacactcggtcaagctca  14246400                                                                                                <----             <---------At4g35610                                                                <----             --------->ZAT2                                    <---------AHL20(2)             <------ZmHOX2a(1)             --------->At4g35610                        ------>ZmHOX2a(2)                   <--------             <---------ZAT2                   --------->GLK1(2)--------->AHL20(2)           <--------      <---------ZAT6                          <---------ARR11(3)                      <---------TOE2(3)      <---------REM1(1)             <---------GLK1(2) <---------ARR11(3)      <---------TOE1(3)<----- ----->ICU4<------ZmHOX2a(1)    ---------->DOF2       --------->ARR11(3)      <---------TOE2(3)------ ---------YAB1            ----------->GT1     --------->ARR11(3)    <-----------GT1   <---------TOE1(3)   tgatgttagtgtaggagctgagtttagggggaaaaaaagaatttcgaaaatctattgatcttcaattttttaacgagttcaaggtttttaggtttaggat  14246500                                                       <---------ANAC46                                          --------->AHL20(2)                                          <---------AHL20(2)                                          --------->AHL20(1)   ------>ZmHOX2a(1)                     --------->AHL20(2) -----RVE1(1)                            <---------AHL20(2)      --------->ATHB12 -----CCA1(1)                         --------->AHL20(2)         <---------ICU4 -TOE1(3)                        --------->LBD16     <---------MYB46(3) -TOE2(3)                       --------->LBD16      --------->ALFIN1       <---------ANAC58 ----ARR11(3)                  <---------HSFB2a(2)  <---------AtMYB61       <---------ANAC58   ------ --->ARR11(3)                  --------->HSFB2a(2)  --------->ALFIN1        <---------ANAC46   <-----   atttcctctagtaatctagggtttatctggtttcccgagataaattaattaggggttgtgggtttcttcattgcaatggcgagaagacatggatggcaac  14246600       <---------ALFIN1    ----------->HVH21                                                                       <--------    <---------ZAT18                                                                --------->ATHB12  <---------At4g35610                                   <---------ANAC58         <-----------------AGL1  --------->At4g35610                              --------->ATHB12              <-----------------AG  --------->ZAT2           ------>ZmHOX2a(1)      --------->ICU4                 <---------TOE2(3)  <---------ZAT2       <-----------GT1            <---------YAB1 <----------DOF2 <---------TOE1(3) --->HSFC1(2)  <---------TOE2(3)     <---------ZAT14    <---------ANAC58        <-----------GT1   --- ----HSFC1(2)  <---------TOE1(3)     --------->ZAT14 <---------WOX13(1)<----------DOF2      ---------   ttccagctcacacatttcaggtttttttccttacaatacttcactgagagtattgattgggttctgtctttgactttggttttaacgatttgggaaattc  14246700                                                                                <--------P                                                                               <---------MYB52(1)      <---------At4g35610      <----------DOF2                            ------->TEIL  <----------DOF2 <---------ANAC46              <---------DAG2                             <---------ARR11(1) --------->YAB1            ---------->ID1              <---------bZIP60(1)--------->ARR14(2) -HSFB2a(1)              <---------MYB46(3)<----------DOF2               <---------CCA1(2) --->ZmHOX2a(1)         --------------->AtSPL8         --------->bZIP60(1)<---------ARR14(2) >HSFB2a(1)     ----------->HVH21          ------>ZmHOX2a(1)             <---------ARR14(1)   ctgtcgtaatctgctattgtgacaagtttgttcctttttctaatccttttgaaaatgacatcaaatgttttgttcgtatctggtagtttactttgttgtg  14246800  Previous    Next  AGI:  At2g33630.1    Description:  3-beta hydroxysteroid dehydrogenase/isomerase family protein. similar to AT3BETAHSD/D1 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1), 3-beta-hydroxy-delta5-steroid dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G47290.2); similar to AT3BETAHSD/D1 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1), 3-beta-hydroxy-delta5-steroid dehydrogenase/ sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) [Arabidopsis thaliana] (TAIR:AT1G47290.1); similar to Os02g0715200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047924.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66283.1); contains InterPro domai Range:  from: 14243909    to: 14245869    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g33640.1    Description:  zinc finger (DHHC type) family protein. similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT4G15080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66266.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) Range:  from: 14246289    to: 14249441    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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