Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->GLK1(1)        <---------GLK1(1)     <---------HSFC1(2)     --------->HSFB2a(1)     --------->HSFC1(2)          --------->ANAC58 --->MYB83                <---------------AGL15 ------>MYB52(1)          --------------->AGL15                                                <----- --->MYB46(1)            ----------------->AGL1                                                ------ ---->AtMYB61            ----------------->AG                                                  ------ -----MYB59              ----------------->AGL2                 ---------->DOF2                ------ ---->MYB46(3)           ----------------->AGL3        --------->At4g35610    --------->ARR11(3)    - >MYB46(3)        --------->ANAC46       <-------TEIL  <---------At4g35610    <---------ARR11(3)    - -MYB52(2)   ------>ZmHOX2a(1)   --------->ANAC58    <---------ZAT18  --------->DOF5.7(2)  <---------   aaaccgaagcatctccttcccagacataccataagaagcaagatgcaaaacacagtctgctccatctaaagcgttatccacatcttgtttcttagtcaca  14245500                                  --------->ARR14(2)             --------->YAB1       <---------ARR14(2)             <---------ICU4     --------->LBD16            <---------YAB1     --------->HSFB2a(2)       --------->bZIP60(1)     <---------HSFB2a(2)       --------->TGA2(1)       --------->ANAC46       <---------TGA2(1)       --------->ANAC55(2)    ----------->HVH21          <---------ANAC55(2)   <-----------HVH21        --------->ARR14(2) ----bZIP60(1)           --------->AHL20(2) --->bZIP60(2)        --------->AHL20(1) --->O2<---------bZIP60(1)  <---------ARR14(2) --->bZIP60(1)  --------->YAB1<---------LBD16                                             ----------- -------->At4g35610   <---------ARR11(3)                              <-----------GT1  --------->DAG2 ---------->RAV1(2)   <---------AHL20(1) ------>ZmHOX2a(2)    <-------TEIL  <------ZmHOX2a(2) --HVH21  --------->YAB1 <---------AHL20(2)  --------->ZAT6  --------->GLK1(2)        ---------->DOF2   tcacctgtgacatcatcatcacaatatataaatccggaactgatctaacactaaaaacttgagattcagaagttacagatcaaattgaaaaagggtttaa  14245600                                --------->ANAC58                                --------->ANAC58                                --------->ANAC46                               --------->SPL7                             <---------SPL7                                         ---------->DOF2--                            <---------MYB52(2)       --------->TOE2(1)            ---------->DOF2  --                           --------->At4g35610       --------->TOE1(1)       ----------->GT1     <---                 --------->TOE2(3)               <------ZmHOX2a(2)       <---------ANAC46        <---                 --------------------->WRI1     --------->ARR11(3)    ----------->TGA1           <---  ------>ZmHOX2a(2)        <---------At4g35610  <---------ARR11(3)    ----------->HVH21  --------->ZAT18 >GT1            --------->TOE1(3) <---------ALFIN1 --------->At4g35610--------->MYB52(1)<---------ZAT18   tggatcgatgaaattggaaccttgaatgcagcgaacgccactgtttttgagatcatcggaccaaggagaagagtgacggaggtcaaaagagcgaacttgg  14245700                                     --------->DREB2C(2)                                     --------->DEAR3(1)                                     --------->At1g77200                                     ----------->HVH21                                    --------->DEAR3(2)                                  <---------ALFIN1          <---------SPL7         <---------ABI4(2)         <---------MYB52(2)      --------->ZAT14      --------->ANAC46           <---------ZAT14                                   ------>NtERF2    <---------ALFIN1          --------->ZAT2                    --------->ANAC46  <---------ALFIN1 ------->ANAC58               --------->At4g35610         ----------->HVH21    ----------->HVH21 ------->ANAC58               <---------At4g35610   --------->AtMYB61       --------->TOE1(2) ------ANAC58                 <---------ZAT2      <---------ARR11(3)        --------->TOE2(2) ------ANAC46          <---------At4g35610        --------->ARR14(3)     <-----------GT1        ----- ------ANAC58          --------->At4g35610        --------->ARR11(3)  --------->ALFIN1          -----   cgagcaccacgacgaacgagctctaagcagagagctgcaccgacgaagccaagacctccagtgaccacgaaggtgttaccttcgacaccttcattctcac  14245800                                                                 ----------->HVH21                                                             <------NtERF2                                                            ------>NtERF2                                                           <---------ANAC58                                                           <---------DEAR3(1)                                                           <---------ANAC58                                                        --------->ANAC58                    ---------                                                        --------->ANAC46                   <---------YAB1                                                        --------->ANAC58               <---------STY1(2)         <-----------GT1         <---------WRKY18(1)  <---------ALFIN1             <---------ZAT2<---     ------->TEIL               --------->WRKY12   --------->ANAC58                --------->STY1(2)   <-------TEIL                 --------->WRKY38(1)--------->ANAC58                --------->ZAT2<--- ---->ANAC58                    ----------->HVH21  --------->ANAC46                <---------At4g35610 ---->ANAC58 <<<<<<<<<TBF1 ---------->DOF2         ----------->HVH21 *TSS          --------->At4g35610   tcaaatgcatttttcttcttctctctctcaaaagttgaccggcgagatgagaaacgacacggcgtctctgacttcttccaaacccagctagctataatgg  14245900       <---------ARR14(2)    --------->O2    --------->ANAC58                                                                    ------>ZmHOX2a(1)    <---------ANAC46                                                    --------->ICU4  ----------->GT1    --------->ANAC58                                                 --------------->AGL15    <---------ANAC55(2)                             <----------DOF2  <---------------AGL15 >YAB1 --------->ARR14(2)                    <-----------TBP        ----------------->AGL1 ------ANAC58                         <------------CBF              <-----------------AGL1 ------ANAC58<----------DOF2        <------ZmHOX2a(1)            <-----------GT1    --------->ARR11(3)   tttgccacgtatacactttaacttaactaatttgatcaggaattgttttttatacttttatttgttttctccccattatggacaaacatcctgtaatttg  14246000                                                                                      <---------WOX13(1)                                                                                    --------->ATHB12                              ----------->GT1                                   --------->ATHB12                          <---------YAB1                                      <---------TOE2(3)           <---------AHL20(2)--------->CCA1(2)                              <---------AHL20(2)    <-----------GT1     ---------->DOF2                                    --------->AHL20(2)  --------->YAB1     --------->YAB1         ----------->GT1            <---------TOE2(3) <---------TOE2(3)   ctaattatactatataatctcatttataaagatagaaaaaacaatagggagaaatatgtttctatttgacattaacatttaatgtttgattgagataatt  14246100                                                                          --------->AHL20(2)                                                                          --------->ARR11(3)                                                                          <---------AHL20(1)                                                                          <---------ARR11(3)                                                                          --------->AHL20(1)                                         <---------AHL20(2)               <---------AHL20(2)                                        <---------AHL20(2)           <---------AHL20(2)                                 <-----------GT1                     --------->AHL20(2)                            <---------AHL20(2)                     --------->YAB1                            <---------AHL20(1)                 <---------AHL20(2)                            --------->AHL20(2)                 --------->AHL20(2)                            --------->AHL20(1)         ----------->GT1   --------->AHL20(2)                 <---------AHL20(2)     --------->AHL20(2) <---------AHL20(2)     ----------->GT1 --------->AHL20(2) --------->AHL20(1) --------->AHL20(2)  <-----------GT1   tgaacaagagtaaaactattgaattaaaaatttattaacaaatttaatattagaaaactgttaaattaaaaataaatatattaacaaatcgaatttttgt  14246200                                                                             <-----------HVH21                                                                        ------->GAMYB                                                                       <------------AtMYB77                                                                      >>>>>>>>>MYB2                      <---------ANAC58                                >>>>>>>>>MYB1        --------->LBD16                      <---------ANAC58                         <---------ARR11(3)         --------->LBD16                  <---------HSFB2a(1)                       --------->AHL20(2)            --------->ANAC46                  --------->HSFB2a(1)                       <---------AHL20(2)----------->HVH21              ----------->GT1                ------>ZmHOX2a(1) --------->ARR11(3)        <------NtERF2            ---------->DOF2                 --------->TOE2(3) <---------CCA1(2)          *TSS   gaatttcagaaataaaaagaaaattcttgtgtaagtctaaaccagtccttaatgttcttcatttatatctctaactgcctgtgacttcgtccccgagaga  14246300             <---------AHL20(2) <----------DOF2            --------->AHL20(2) <---------DAG2                                                    ----         --------->YAB1 --------->At4g35610                                              ---------->DOF2       <---------WOX13(1)    ------->TEIL            ------>ZmHOX2a(1)                  --------->WRKY18(1)     --------->ATHB12   <---------At4g35610      <-----------GT1                       <-----------HVH21    <---------YAB1---------->DOF2         ------>ZmHOX2a(1)  <---------ZAT18           <--------ZAP1<   cactctctgattgataaaattcaagcagatgaaccttttaagtcctgaaattttcctcactagtcgacttaatcaagtgctatacactcggtcaagctca  14246400  Previous    Next  AGI:  At2g33630.1    Description:  3-beta hydroxysteroid dehydrogenase/isomerase family protein. similar to AT3BETAHSD/D1 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1), 3-beta-hydroxy-delta5-steroid dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G47290.2); similar to AT3BETAHSD/D1 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1), 3-beta-hydroxy-delta5-steroid dehydrogenase/ sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) [Arabidopsis thaliana] (TAIR:AT1G47290.1); similar to Os02g0715200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047924.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66283.1); contains InterPro domai Range:  from: 14243909    to: 14245869    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g33640.1    Description:  zinc finger (DHHC type) family protein. similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT4G15080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66266.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) Range:  from: 14246289    to: 14249441    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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