Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------GLK1(2)                                      <---------YAB1                --------->ARR11(3)                         <---------ANAC58                <---------ARR14(3)          --------->ANAC58     --------->AHL20(2)                --------->ARR14(3)    ---------->DOF2      <---------ANAC46                <---------ARR11(3) --------->YAB1          ----------->GT1<---------GLK1(1)          --------->ARR11(3)    <---------ICU4             <---------ANAC58   <---------HSFB2a(2)     --------->AHL20(2)     <-----------GT1 --------->ANAC58 ----------->GT1  --------->HSFB2a(2)   ttactaagaaaatatcaagattttgtctaattactaattagaaaggaagcactaatttttggggtgaaaaaatatgatttctggacaattagataaaaaa  14240900                                                          <---------ANAC46                                                         <---------LBD16      -------->HAHB4                           --------->AHL20(2)      <--------ATHB1                           <---------AHL20(2)                     <-----------HVH21      --------->ATHB51                    --------->AHL20(1)                         <------MYB83      <---------ICU4               ----------->GT1  <---------AHL20(2)               <------MYB46(1)      --------->ATHB12            --------->DAG2    --------->AHL20(1)              --------->MYB59     <---------AHL20(2)        --------->CCA1(2)   <---------AHL20(2)             --------->ARR14(1)-     --------->AHL20(2)   ---------->DOF2 <---------AHL20(1)                      --------->CCA1(2) -     <---------YAB1      --------->AHL20(2)--------->AHL20(2)                    --------->ARR11(1) <     --------->ICU4 --------->AHL20(2)    --------->ARR11(3)                     --------->ARR11(3)<-     <---------ATHB51 --------->YAB1      <---------ARR11(3)   --------->YAB1    <---------ARR14(2)<-   --------->YAB1 --------->AHL20(2) ----------->GT1--------->AHL20(2)           --------->ARR14(2)-- --------->AHL20(2)--------->YAB1---------->DOF2   --------->AHL20(2)     --------->AHL20(2) --------   caaaaaaataattggactaaataaaaataaaagataaaagtgaaaatatttaaaaaaattggggataataatccaaataaaaagatttggtcactgggac  14241000                                                                                   <----------DOF2               --------->AHL20(1)                                                ---------->ID1               --------->ARR11(3)                                            <----------DOF2               <---------ARR11(3)                                          ------>ZmHOX2a(1)              <---------AHL20(2)                                       ------>ZmHOX2a(2)            --------->AHL20(2)                                         ==============================    --------->ZAT18                                                   ===============================    <---------ZAT18                                                   <---------GLK1(1)    --------->LBD16                                                   --------->GLK1(1)  <---------LBD16                                                     <------ZmHOX2a(2) -------->GLK1(2)                                                    --------->ARR14(3) -------->ARR14(2)                                                   --------->ARR14(2)            -- ---------ARR14(2)                         --------->TOE2(3)         <---------ARR14(2)          ---- --------ARR14(2)                   --------->AHL20(2)               --------->ARR11(3)          <--- --------GLK1(2)                   --------->AHL20(2)                <---------ARR11(3)   <----------DOF2 ------->ARR14(2)          ---------->DOF2 --------->TOE1(3)        --------->GLK1(1)     <---------DAG2 --->HVH21  <---------AHL20(2) --------->AHL20(2)  ---------->DOF2  <---------GLK1(1)  <-----------GT1   agattccgcactatatatatattcttgtctaaagaaaataaaaaaccctaaaaaaaagaggcagacagagagatctcctctttgtctttttactttatct  14241100    --------->ARR14(2)    <---------ARR14(2)                                                <---------ANAC58   <---------HSFC1(2)                                                 <---------ANAC58 =====HOX2a_HOX2a                     <----------DOF2               <---------AHL20(2)         ------ =====HOX2a_HOX2a       <---------TOE2(2)                           --------->ARR11(3)         ------ ---->ZmHOX2a(1)        <---------TOE1(2)                    <---------TOE2(3)                 <----- ------->RAV1(2)     <---------ANAC55(2)                   <---------AHL20(2)                  <----- ------LBD16  <-----------HVH21<-----------GT1            <---------YAB1          <-----------GT1   cctgaagtttcgcctcagtcatctcgtaagttttctctctctttctcattcaattcaatttttaatgtaatttcttgtttgatttttctattttcttcga  14241200                                 --------->DAG2                                ---------->DOF2                           <---------YAB1                                      --------->TOE1(3)                      <---------AHL20(2)                           <-----------GT1                     --------->AHL20(1)                       --------->AHL20(2)                  ---      <---------GLK1(2)   --------->AHL20(2)                  <---------AHL20(2)     --------->GLK1(2) --->HSFB2a(2)       --------->AHL20(2)                   <-----------TBP      --------->YAB1  ------ --->HSFC1(1)------>ZmHOX2a(1)<---------YAB1          <---------YAB1     --------->TOE2(3)     ------ ----HSFC1(1)----------->GT1--------->YAB1           <---------TOE2(3)   <----------DOF2<---------HSFB2a(2) ----HSFB2a(2)       <---------AHL20(2)    <----------DOF2--------->AHL20(2)   --------->TOE2(3)*TSS   gaaaacaaaattctcctgtaaaatttaatattataaaagtggtttctttttcatttatgtttatataattttcatctttaatcttaaattctggtaacct  14241300                                               --------->AHL20(2)                                          ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)                                        >>>>>>>>>GATA-1        ------>ZmHOX2a(2)               --------->AGP1       <------ZmHOX2a(2)                --------->ARR11(3)      <---------ARR14(2)                >>>>>>>>>GATA-3      --------->ARR14(2)                >>>>>>>>>GATA-4   --------->LBD16                      >>>>>>>>>GATA-2                    ----------->GT1 ------->DOF2            <---------ANAC46--------->CCA1(2)          --------->ARR11(3) --->TOE1(3)<----------DOF2             <---------ARR11(3)          <---------ARR14(2) --->TOE2(3)<---------DAG2             --------->GLK1(1)           <---------CCA1(2)   taatgcgcgatccgcttttctaaagttttgtgagagagaagagatctaaaaaaatccacaattttgttcaaatcttggagttaaatgctgaattttaggc  14241400                                                                                                  <--                                                                                             <-------                                                                                           <-------GAMYB                                                                                          <---------DEAR3(1)                                                                                       <---------DEAR3(1)                                              ----------->GT1                       =================                  <----------DOF2            <---------------AtSPL8                 =================                 <---------ANAC58          --------->CCA1(2)                        <---------O2  <--                 <---------ANAC46         <---------ARR14(2)                        --------->O2  <--    <---------ANAC46                      --------->ARR14(2)----------->GT1         --------->TGA1a    <---------ANAC58            <----------DOF2      --------->ARR14(2)             <---------TGA1a<-    <---------ANAC58---------->DOF2 --------->ATHB12 --------->ARR11(3)             ================= ---------->ID1  <---------ANAC58  <---------YAB1    <---------ARR14(2)             ===============MYC_MYB   cttgttgcttagatttatggcttaaagtttcaaacttttcattggatatggtacaaatcttgtagttaaacactgaattgtgtccctcgtgggcgttgtt  14241500                                                                                       <----------DOF2                                                                                      <---------ANAC58                                                                                      <---------ANAC58    <---------WOX13(1)                                                                <---------ANAC46    <----------DOF2                                                              <---------REM1(1) -------ANAC58                                                                   <-----------RAV1(1) --MYB46(3)                                                                      <---------MYB46(3) ========================bZIP_DOF ----------->GT1                             <---------MYB46(3)    < =========bZIP_DOF               <---------------AtSPL8                     <-------GAMYB          <- -------ANAC58                   --------------->AtSPL8                    --------->ALFIN1        <- -------ANAC46                 --------->CCA1(2)          <---------ZAT14<---------ANAC46          <- ---------DOF2---------->DOF2 <---------ARR14(2)          --------->ZAT14<---------ANAC58   <-------- ==============bZIP_DOF       --------->ARR14(2)        --------->ANAC46 <---------ANAC58   <--------   gctttgatttatggccaaaagtttcaaacttggatatggtacaatcttgtagttatacactgcattgtctctcttgggtgttgttgttgctttgatttat  14241600                                                                                       <---------ANAC46                                                                                       <---------ANAC58  ---------->DOF2                                                                      <---------ANAC58 ----------DOF2             ----------->GT1                                       <---------MYB46(3) --------ANAC58    <---------ANAC58                                               <---------REM1(1) --------ANAC46    <---------ANAC58                                               <-----------RAV1(1) --------ANAC58    <---------ANAC46                                          <---------ANAC58 --DOF2       <---------DAG2<---------MYB46(3)                               <---------ANAC58 -WOX13(1)    <----------DOF2            <---------MYB46(3)                  <---------ANAC46   ggcttaaagtttcaaactttttcttggagatggttcaatcttgttgttgaaagttgaaacactgaattgtctctcttgtgcgtgttgttgcttagattta  14241700                                                                                           <---------                                                                                        <-----------GT1                                                                ----------->GT1     <---------DAG2                                                         ---------->ID1             <----------DOF2                                      <---------AtLEC2 <---------ANAC46          --------->ZAT6                         <---------ZAT14         <---------TOE2(3)          --------->At4g35610   ---------->DOF2       --------->ZAT14 ----------->GT1 <---------TOE2(3)  <---------At4g35610   <--   tggctaaaagtttcaaactttcttcacttcagagcttcttgaatggaaactatggttttgtggttttggttaatcttctgctaacactttttgccctgtt  14241800  Previous    Next  AGI:  At2g33620.1    Description:  DNA-binding family protein / AT-hook protein 1 (AHP1). similar to DNA-binding family protein [Arabidopsis thaliana] (TAIR:AT4G17950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66284.1); contains InterPro domain Protein of unknown function DUF296 (InterPro:IPR005175); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637) Range:  from: 14241296    to: 14243959    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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