Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    ------>NtERF2                                                 --------->DEAR3(1)    ------>ZmHOX2a(2)                            --------->MYB46(3)   <------ZmHOX2a(2)                           ------>NtERF2  --------->ARR14(2)                           <---------ATERF1(1)  --------->ARR14(3)                          ----------->HVH21  <---------ARR14(2)                          --------->DEAR3(1)         --------->AtMYB61  <---------AGP1                              <---------DEAR3(1)         <---------ALFIN1------------  --------->AGP1                             --------->ATERF1(1)XXXXXXXXXXXXXXXXXXX>MIR394A/B  <---------ARR14(3)                        ------>NtERF2       <---------ALFIN1       ------>MYB83  <---------ARR11(3)                        --------->LBD16    <------NtERF2         --------->AtMYB61  --------->ARR11(3)      ---------->DOF2  <---------ANAC46 --------->At4g35610    --------->ARR11(3) ----DOF2             --------->LBD16     <---------LBD16---------->DOF2--------->MYB46(3)        <-- ------->AGL15<---------ANAC58  --------->ANAC58<------NtERF2 --------->RAP2.6(2)  <---------ARR11(3) -------->AGL3<---------ANAC58  --------->ANAC58--------->ATERF1(1)  ----------->HVH21 ------>MYB46(1)   ttaagatcttgttctggcttaatccagagaaagtaagcaatagttccggcgacgacccaagaagcggcactctgaccacctctaagacctcccatggaat  14230900                                                                                              ------>ZmHOX2a(2)                                                                                             --------               <---------O2                                                                  <-------               --------->TGA1a                                                              <--------               --------->O2                                                                 ---------               --------->ANAC55(2)                                                          <--------              <---------TOE1(2)            --------->ANAC58                                 <--------           ------>ZmHOX2a(2)               --------->ANAC58                                 ---------          <------ZmHOX2a(2)             --------->At4g35610                                <---------CCA1(2)         <---------AGP1              <---------At4g35610                                 --------->HSFB2a(2)         --------->ARR11(3)          --------->ZAT2                                      <---------HSFB2a(2)         <---------ARR11(3)          <---------ZAT2                                     <---------LBD16         <-----------ARR10   ------>ZmHOX2a(2)                                     --------->ARR14(2)     ====================bZIP_DOF    --------->At4g35610                        <---------TOE1(3)     ---------->DOF2       <---------ARR11(3)       <---------WOX13(1)          <---------TOE1(2) --------->WRI1<---------TGA1a     <-----------RAV1(2)                          <---------TOE2(3) -------At5g28300          --------->ARR11(3)     --------->ATHB12  --------->ANAC46<-------TEIL   taccgatgaaagatctcacgtttccaattgatcttctccagctgctagccattgattgatgcccaactatacgaactggtctaaggttcttctggatctc  14231000                          --------->ATHB12                         <---------YAB1                         --------->ICU4                       --------->YAB1  ----------->HVH21   --------->ICU4 ->GLK1(1)            <---------YAB1                            <-----------RAV1(2)                 < --GLK1(1)          --------->YAB1                          ---------->DOF2                    <----- -ARR14(2)       <----------DOF2                        ----------->GT1                     <-------- >ARR11(3)    <---------WRKY18(1)                      --------->DAG2                       <-------- -ARR11(3)  <---------WOX13(1)                        ---------->DOF2                       <-------- -AGP1     <---------ANAC58                        --------->ANAC58                         <-------- >ARR14(2) <---------ANAC58                        --------->ANAC58            <---------YAB1  <-----   ttctctgacaattgcttgactttgatgatgattcgatttggaactgaaattgcaagaaaagtaaaagcaggcgatttgattttgattcgcatttgcttgg  14231100                                                                                  --------->bZIP60(2)                                                                                  --------->ANAC55(2)                                                                                  <---------ANAC55(2)                                                                                  --------->ANAC46                                  <---------MYB52(1)                              --------->ANAC58                                 --------->At5g28300                              --------->O2                                 <-------GAMYB                                    --------->ANAC55(1)                                ----------->GT1                      --------->MYB55(2)                            ----------->HVH21                        <---------MYB46(3) --------->ZAT6            ------>NtERF2                           <---------At4g35610 ---------ZAT14           --------->DEAR3(1)                      <---------RAP2.3(1) -MYB83                  <------NtERF2                           <---------RAP2.6(2) -ANAC58               <---------DEAR3(1)                        <---------RAP2.3(2) -ANAC58               <---------ETT(2)              ----------->HVH21 <---------MYB52(1)       <---- -ANAC46              --------->SPL7                <---------WOX13(1)<-------GAMYB            <----- -AtLEC2             <---------MYB52(1)     --------->ATHB12    <---------LBD16   --------->ANAC58  - -MYB46(1)           <-----------HVH21     <---------YAB1 --------->bZIP60(2)   <---------ALFIN1-----   tgaacactgccaaaggctaaaccggtcgccgagacggttaatctgatgtttgggattgacacatcatgcggctgttgtttctccacgtaacatttggaga  14231200                     <------NtERF2                    --------->LBD16                    <------NtERF2            <---------ZAT18                  <---------LBD16            --------->PCF2        --------->ARR11(3)              --------->ARR14(2)        --------->AHL20(1)              <---------ARR14(2)        <---------ARR11(3)           <---------------AGL15        --------->AHL20(2)           --------------->AGL15                  --------->AHL20(1)        <---------AHL20(2)          ----------------->AGL1                  <---------AHL20(2)        <---------AHL20(1)          <-----------------AGL1           ----------->GT1       --------->AHL20(2)           ----------------->AGL2           <------MYB46(1)         <------- -----ARR14(2)   <---------PCF2     <-----------------AGL2           <------MYB83       <---------LBD16 ----GLK1(1)<-----------RAV1(1)   <-----------GT1      <----------DOF2      --------->AHL20(2) -------->At4g35610<---------ANAC46<-----------------AGL1           --------->MYB59 --------->GLK1(2) ---->ARR14(2)  ----------->TCP11(1)----------------->AG         --------->ALFIN1------------>CBF <--   cccgctcaaatatattgtgggccggagaacattgttttaccatatagggcccatagactttgaatatgtgtaggtaaataaaatacaatctgtggaacaa  14231300                                  ------------>CBF                             ----------->GT1                             <------MYB46(1)                         <------ZmHOX2a(1)                         --------->ATHB12        <---------AHL20(1)   <------MYB83        --------->AHL20(1)   <---------MYB46(3)                                    <---------CCA1(2)        <---------ARR11(3)--------->ARR14(2)                                     --------->YAB1        --------->ARR11(3)<------------CBF                 <------MYB83       --------->WOX13(1)       --------->YAB1--------->At4g35610                   ----------->GT1  <---------YAB1 ----------->GT1     <---------ZAT2                        <------MYB46(1)<---------CCA1(2) ----------AGL1      <---------At4g35610    *TSS     <-------TEIL --------->At4g35610   <---------CCA1(2) -------ICU4         --------->ZAT2        <---------At4g35610    ----------->RAV1(2) --------->YAB1   aaatggcaaaaatatttgaagtcagcaggattggttaacaatttgagcacagaaatacatttggtaacatctgagcatatcattcatatcatatcgctgt  14231400                                                                             <----------ID1                                                                             --------->ANAC58                                                                             --------->ANAC46                                                                             --------->ANAC58                                   <---------ARR11(3)               <---------ICU4                                   --------->ARR11(3)               --------->YAB1                                   --------->AHL20(1)  <---------YAB1  --------->AHL20(2)                          <------ZmHOX2a(1)         --------->ICU4 --------->ICU4         ---------->DOF2                ---------->DOF2----------->GT1      <---------YAB1 <---------YAB1     <-----------GT1       ----------->GT1  <---------TOE2(3)         <---------At4g35610 <---------YAB1 --------->AHL20(2)   cgaatttgaaggaaaaaaaaaagactaaggaagtggatatattggtgaatgctgatgatgagaaaacttattattatatacgaaaaatttactaaagaca  14231500                         <---------ARR14(2)                         --------->ARR11(3)                         <---------GLK1(2)                        --------->HSFC1(2)                                                   <-------                        <---------HSFC1(2)                                             ==============                        <---------HSFB2a(1)                                            --------->O2               -------->HAHB4          <---------ANAC46                                <---------O2               --------->YAB1          --------->ALFIN1                                --------->TGA1a               --------->ATHB12      <---------ANAC58                                  <---------TGA1a              --------->ICU4         <---------ANAC46                                  ----------->RAV1(2)              <---------YAB1         <---------ANAC58       --------->ZAT14            --------->ZAT2            <---------ICU4        <---------AtMYB61         <---------ZAT14           ------>MYB83            --------->YAB1--------->GLK1(2)            <------NtERF2                  -------->P           --------->ICU4--------->ARR14(2)       --------->ALFIN1                    ------>MYB46(1)         --------->YAB1 --------->HSFB2a(1)      <---------ZAT14                     <---------ALFIN1 <---------KAN4(1)     <---------KAN4(2)         --------->ZAT14    --------->WRKY18(1)<---------ZAT2 --------->KAN4(1)     ----------->ARR10        --------->ALFIN1  ----------->GT1   --------->MYB46(3)   gcaatattccaaaataatgatagggaagattctgagatggtgtgtggtcagtgtggaggcactacagatggtcaaacagtagcatacccacctggctatt  14231600                ----------->GT1         --------->ANAC58     <------ZmHOX2a(1)                     <---------------AGL15    <----------ID1                         --------------->AGL15   --------->ANAC58                      <---------At4g35610                     --------->YAB1   --------->ANAC58           <---------HSFC1(2)        ------->GAMYB           <---------ATHB12   XXXXXXXXXXXXXXXXXXXX>MIR854A-E        --------->At4g35610  --------------------->WRI1<------ZmHOX2a(2) ---DOF2 --------->ANAC58<---------HSFB2a(2)           --------->MYB46(3)     --------->WOX13(1)  <-- ===bZIP_DOF   >>>>>>>>>TBF1  --------->HSFC1(2)     <-----------GT1         --------->MYB46(3)   <--   tggacaaggacaaggaagaagaaaaatcgagaaccatcttctcagccgattttagtaaccatcttcttgtttgctccgaacaatcaagagatcgaaaatg  14231700                                                                  ======================HOX2a_HOX2a                                                                  ------>ZmHOX2a(2)                                     <------NtERF2              --------->ARR14(2)                                    --------->LBD16          <------NtERF2                                    <---------SPL7         <---------DEAR3(1)                                   <---------ANAC46        <---------MYB46(3)                                  <---------LBD16   <---------ANAC58                                  --------->ATERF1(1)  <---------MYB46(3)        <---------ICU4                                  <------NtERF2     <---------ANAC46             <------ZmHOX2a(1)                                 ------>NtERF2      --------->MYB52(2)          --------->ICU4                                --------->ALFIN1    <---------ANAC58           <---------TOE2(3)                          --------->ARR14(2)       <---------AtMYB61           <---------TOE1(3)         ---------->DOF2  <---------ARR14(2)    <---------ANAC58<---------ARR14(2) -------------------WRI1 ----------->HVH21      <---------ANAC58<---------ARR11(3) -------ANAC46  --------->DAG2  ----------->HVH21  <-------TEIL --------->ARR11(3)             ------   gctgatgttcacaaaggaaaggtttgtgtaaccggtgccggagggtttttgggttcgtgggtcgtcgatcttcttctctctaaggattacttcgtccatg  14231800  Previous    Next  AGI:  At2g33585.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO66293.1) Range:  from: 14230276    to: 14231243    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g33590.1    Description:  cinnamoyl-CoA reductase family. similar to cinnamoyl-CoA reductase family [Arabidopsis thaliana] (TAIR:AT2G33600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66289.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 14231344    to: 14233678    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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