Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------PCF5                                                                                   --------->PCF2                                                                                 --------->DEAR3(1)                                                                               ------->TEIL                                                                             <---------ZAT14                                                                             --------->ZAT14                                                                            ----------->HVH21                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                       --------->LBD16                                                                       ------>NtERF2                                                                      --------->ANAC46                                                --------->LBD16       <---------ETT(1)                                                ------>NtERF2         <---------HSFB2a(2)           -                                               <---------DEAR3(1)     --------->HSFB2a(2)           <       ------>ZmHOX2a(1)              --------->YAB1                  <---------ATERF1(2)    <-------      --------->TOE2(3)              <---------YAB1                  <---------LBD16--------->SPL7  -      --------->TOE1(3)    <----------DOF2    <---------LBD16    <----------DOF2--------->DEAR3(2) <-   agtctcttccttaatctgagactcccattctttaatcttcttataatctccggcgagattgctccatcttttccggcactgaaccggcccacgatttaca  14218300                                                                         <---------ALFIN1                                                                        <---------At4g35610                                                                        ------>NtERF2                                                                        --------->At4g35610                                                                       --------->DEAR3(1)                                                                      --------->RAP2.3(1)                                                                      --------->DEAR4(2)                                                                      <------NtERF2     --------->DOF5.7(2)                                             <---------ATERF1(1)           --   <---------ANAC46                                                  ------>NtERF2                ---   <---------ANAC58                               ----------->HVH21  --------->LBD16              ---   <---------ANAC58                               <---------ETT(1)  --------->ANAC46             <--- ---------->HVH21--------->ANAC58                --------->DEAR3(2)--------->MYB46(3)       --------- ---------MYB52(1)  --------->MYB52(1)           --------->MYB46(3)<---------LBD16   --------->LBD16 ----GT1 --------->ZAT6                       <-----------GT1    --------->ARR14(2)  <---------SPL7-- ---------->TGA1 --------->ANAC58            ----------->HVH21   <---------ARR14(2) --------->DEAR3(1) ----------HVH21 --------->ANAC46            --------->WRKY12   <---------ALFIN1   <---------LBD16---   ccgtgacgtttacagtaagacgaaacagaagcccatttaggctccatttgacccgacccgagagccatacccgccgctctccctcgccggactctgttct  14218400                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                     <-----------HVH21                                                                                    --------->DEAR3(1)                                                                             <---------At4g35610<----                                                                          <---------MYB52(1)   <-----                                                                          <------NtERF2  --------->At4g35610                                                                         <-----------TGA1<---------At4g35610                                                                         <-----------HVH21    <------                                                                         ------>NtERF2<---------MYB52(1)                                                                        --------->RRTF1(3)    <------                                                                        --------->RAP2.3(3)   <------   <---------ALFIN1                                                     --------->RAP2.3(2)   ------- <---------ALFIN1                                                       --------->DEAR3(1)    <------ ------->LBD16                                                          --------->RAP2.6(2)   <------ ------>ANAC58                                                         --------->RAP2.3(1) ---------- ------>ANAC58                                                     ---------->DOF2  --------->DREB2C(2) ------LBD16                 --------->GLK1(2)                ------>NtERF2  --------->At4g35610----- >ZAT14                     --------->ARR14(2)               --------->DEAR3(1)  <---------ALFIN1---- ---->NtERF2                <---------GLK1(2)      <------ZmHOX2a(1) --------->ANAC46<-----------TGA1 ------>ANAC46     --------->YAB1              --------------------->WRI1<---------RAP2.6(3)  <------   ccgccactctcttcccttgaatcagaaccagaatctcttgtctcgtccaacgaggaagtctcgccgtcttaacgccgtcatctccaccgtcatttgacgg  14218500      --------->ZAT14 -----NtERF2 ------->ANAC58 ------->ANAC58                                                               <-----------------AG -------ZAT18                                                                 <-----------------AGL1 ------>ZAT18                                                              <---------ANAC58 --->NtERF2                                                             <-----------GT1 ----RAP2.3(1)             --------->At4g35610                         --------->KAN4(2) ----RRTF1(1)              <---------At4g35610                        <---------HSFC1(2) >NtERF2                   ------>NtERF2                              --------->HSFB2a(1) --NtERF2               ------->GAMYB                                 --------->HSFC1(2) ----ERF1              <---------DEAR3(1)                             <---------HSFB2a(1) ---RAP2.3(3)          --------->ANAC46                               <---------KAN4(1) ---ATERF1(2)        --------->MYB52(1)                              <---------KAN4(2) ---RRTF1(3)         <---------DOF5.7(2)            --------->LBD16  ---------->TaMYB80       <------ -->ANAC46          <---------WRKY12               <---------HSFB2a(2)<----------TaMYB80      <------ ---DEAR3(1)        <---------WRKY38(1)            --------->HSFB2a(2)--------->KAN4(1)  <---------ICU4 ---RAP2.3(2)      --------->DOF5.7(2)     --------->MYB52(1)    --------->ANAC46       <---------YAB1 ->HVH21          <-----------HVH21       ------>ZmHOX2a(1)      --------->ANAC58     --------->YAB1 ---->ATERF1(1)  --------->DREB2C(2)     <---------MYB59         --------->ANAC58    <---------YAB1 ----->DEAR3(1)  --------->DEAR3(1)     --------->YAB1         --------->MYB52(1) <---------MYB52(1) ---RRTF1(2)  <---------ALFIN1      ------>ZmHOX2a(1)      --------->AtLEC2<---------ANAC58   <------   cgcgctactgttctctccaccgtcaacggcgctcactcctaatcctaactgttccagagccattcaaacggaatattccttcccgttttgataattccgt  14218600                                                   <------NtERF2                                                 <---------ANAC46                                                 --------->DEAR3(1)                                                <---------LBD16                                                --------->ATERF1(1)                                                <------NtERF2                                               <---------RAP2.3(1)                                            <---------DOF5.7(2)                              <-------         <---------HSFB2a(2)              --------->DOF5.7(2)                               ---------         --------->HSFB2a(2)              <---------MYB52(1)    --------->At4g35610       <---------ARR11(3) ---ANAC58            <----------DOF2    <-----------HVH21      *TSS                  ---------->DOF2 ---ANAC58         ------->GAMYB <------ZmHOX2a(1)--------->LBD16         ---------->DOF2 --------->ARR11(3) ---ANAC46      --------->MYB52(1) <---------GLK1(1)          <------ZmHOX2a(1)  ---------->DOF2   tcaaacgggttccagacttaacggcgttatggtgaggacatcccgttagcgccggagagagagaggagctacaaatgaaagagcaaagaaaagatttatt  14218700                                                                                               ------                        --------->TOE2(3)                                              <---------AHL20(2)                  <---------TOE2(3)                                                   --------->AHL20(2)                <---------AHL20(2)                                               <---------AHL20(1)      <---------ICU4    --------->YAB1             <---------ZAT14               --------->AHL20(2)     --------->ICU4  <---------CCA1(2)      <------MYB46(1)            <---------ZAT6 <---------AHL20(2)    --------->ARR11(3)------->TEIL          <------MYB83    <------------CBF     <---------AHL20(2)<- --AHL20(2) <----------DOF2           --------->AHL20(2)  <---------AHL20(2) --------->YAB1  <------- >AHL20(2)  <---------DAG2            <---------AHL20(2) --------->AHL20(2) <---------YAB1   <-------   ttgtgagataatgactttttaatgtatcttaatctgatttttaatttggtgactgtagataaaattgacccttgtgttatcattttattttaatttcgtc  14218800                          --------->CCA1(2)                         --------->ARR11(3)                   <----------DOF2                         <---------ARR11(3)            <---------AHL20(2)             <---------TOE2(3)                         --------->AHL20(2)                <-----------      <----------DOF2    --------->ARR14(2)          --------->TOE2(3)                  <---------ANAC58 ---->ID1    <---------TOE1(3)                       <----------DOF2         <---------TOE2(3) --------MYB52(1)<-------TEIL                       <---------ICU4        --------->ICU4<------------ --ANAC58    --------->DAG2                        --------->ICU4     --------->At5g28300------------ --ANAC58--------->YAB1  <---------ARR14(2)     <---------MYB52(1)   ----------->GT1    <---------ANAC58   ccttaagcctttcataaggttcatgtagatatgttgaatttaagtagaccgtaatctttaattcctttagaccgtaattagggattacatgcttgatatg  14218900                                                                                    <----------DOF2                                                                    <---------AHL20(2)         ------                                <---------ALFIN1                    --------->AHL20(2)         <-----      ------>ZmHOX2a(1)   <----------DOF2                        --------->YAB1  <-----------GT1 ---- ----AGL15          --------->bZIP60(2)                <------ZmHOX2a(2)         <---------ARR11(3) -----AGL2          --------->ANAC46                  <---------ARR11(3)         --------->ARR11(3) - --->AGL15 <---------AHL20(2)--------->YAB1           --------->ARR11(3)     --------->YAB1   -------   gctatttcctgatttttttgacacatcactttcatcacctcattttctacggccaagatcactctaaaaataaaatcaaaaattatctttttcttatatt  14219000                                                                     --------->YAB1                                                          <------MYB46(1)                                                          <------MYB83                                                          ----------->GT1                                       ------->TEIL<---------------AGL15                                     <---------ZAT18     --------->MYB59                          <--                                  ---------->DOF2  --------------->AGL15                          <--                                <---------ARR11(3) --------->YAB1   <---------YAB1    --------->ICU4<    <-----------GT1             --------->ARR11(3)<-----------------AGL1       <---------ANAC58   <-- --->AHL20(2)               --------->YAB1        <-----------------AGL2       <---------ANAC58<----- ----AHL20(2)               ---------->DOF2       <-----------------AG --------->CCA1(2)      ------- ----->YAB1  <---------AHL20(2)--------->YAB1     ----------------->AGL3 <---------YAB1     <-------- -------->YAB1        --------->ANAC55(2)   <---------AHL20(2)    --------->YAB1 ----------->GT1 <--- -->YAB1    --------->ICU4 --------->ICU4   --------->AHL20(2)   <---------YAB1<---------ANAC46<-----   aataataaactgtatttattgtttatgtaataaagataatgcacatataattttcatatttggtaatattatgatatggttgtgtgtaaatatggagggg  14219100                                                                          <-----------GT1                                                                      <---------ANAC58 ----------->ARR10                                           --------->YAB1 -------ANAC46                                             -------->P <---------ANAC58 -------ANAC58                                           <---------MYB111(2) ------NtERF2           <----------DOF2                  <---------MYB111(1) -------ANAC58       <------NtERF2                       <---------MYB46(2)                     <---- ----RAP2.3(3)      ------>NtERF2                        <---------MYB55(2)                     <---- -->ATERF1(1)      --------->ANAC58            <-----------GT1        <---------ANAC46 ------>ZmHOX2a(1) -ANAC46           --------->ANAC58     ----------->GT1  --------->MYB46(3)          <---------ICU4 ---NtERF2         --------->ANAC46     <---------MYB46(3)------->GAMYB<----------DOF2--------->TOE2(3) ----DEAR3(1)  ---------->DOF2     <---------YAB1        <---------MYB52(2) --------->ANAC46---------   gcgtagattatggcaataaacgcgccctttgagtatttctattggttaatttctctccaactaccataagttgcttttactccataatccttatatatgc  14219200  Previous    Next  AGI:  At2g33550.1    Description:  gt-2-related. similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT2G35640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68688.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005) Range:  from: 14217108    to: 14218664    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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