Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->LBD16                                         <-------TEIL<------NtERF2                                      <---------ANAC58     <------ZmHOX2a(1)                                      <---------ANAC58  <------ZmHOX2a(1)                                   --------->ATERF1(1)--------->ALFIN1--------->LBD16                                   <------NtERF2   <------NtERF2     <---------ANAC58         <<<<<<<GRF7                              <---------DEAR3(1)  <---------LBD16    <---------ANAC46       ------>ZmHOX2a(1)                              --------->ANAC46  --------->ATERF1(1)  <---------ANAC55(2)    ---------                             <---------LBD16  <---------ANAC58  --------->At4g35610 --------->YAB1 ---ZAT2       --------->TOE2(3) <---------DEAR3(1)<---------ANAC46  <---------ANAC55(1)  ----------- -->At4g35610  --------->TOE1(3)<---------LBD16<-----------HVH21<---------At4g35610<---------ATHB12 ->ANAC58     ----------->RAV1(2)--------->ALFIN1<---------ANAC46    <---------ANAC58 <---------ALFIN1 ->ANAC58<------ZmHOX2a(1)  <---------ALFIN1  <---------ANAC58  --------->ZAT2   --------->WOX13(1)   ccaaaaccgaaggacaacctgaaaacccttccacggcggagcgttcatgcgtcgcggaggaggaacagcttccgtgaacatcccaatcacactcctgaca  14196900                               --------->MYB52(1)                          --------->ANAC58                         --------->SPL1(2)                         --------->SPL7                     ===========================HOX2a_HOX2a                         <-------TEIL                       ------>ZmHOX2a(2)                         ------->TEIL                      --------->CCA1(2)                        --------->MYB52(1)                 <------ZmHOX2a(2)                        --------->SPL1(1)                  ============================HOX2a_HOX2a                      <---------MYB52(2)                  <---------AGP1                        -----                     <---------------AtSPL3               --------->AGP1                    <-------TEIL                    --------->MYB52(1)                    --------->ARR11(3)             --------->HSFB2a(1)                    <------------------SPL14              <---------ARR11(3)             --------->HSFC1(2)                 --------->ANAC58   <-----------ARR10     --------->ARR14(2)             <---------HSFC1(2)      <---------GLK1(2)<---------SPL7  <----------DOF2    <---------ARR14(2)             <---------HSFB2a(1) -->HVH21        --------->ANAC58--------->DEAR3(1)      <---------CCA1(2)      ------>ZmHOX2a(1)---- >RAV1(2)--------->GLK1(2)--------->ANAC58          <---------YAB1    ------->TEIL      ----------->ARR10   caatacgagattatctgtgaagcaacgtacggacaccggctctttgctacagttatcacagatctgagaacgaacatgcttcctcgagagaaggttcgcc  14197000                                                                                              <------      --------->ALFIN1                                                                       <-------     ------->MYC2                                                                     --------->bZIP60(2)     <-------PIF5                                                                     --------->TGA1a     ------->PIF5                                                                     --------->ANAC58     <-------MYC4                                                         ------>NtERF2      --------     ------->MYC4                                                        --------->ANAC46    <-------     <-------PIF4                                                        --------->RAP2.6(2)---------     ------->MYC3                                                        --------->RRTF1(2)--------->bZIP60(2)     ------->PIF4                                                        --------->DEAR3(1)--------->ANAC46     <-------MYC3                                             --------->DEAR3(1)      --------->ANAC46     <-------MYC2                                          --------->DEAR3(1)         --------->ANAC58   ------->TEIL                                            =====================================MYC_MYB   ------------>OsbHLH66    --------->HSFC1(2)             ------->GAMYB--------->RAP2.3(1)--------->MYB46(3)  <------------OsbHLH66  ---------->DOF2                  --------->DEAR3(2)          --------->ANAC55(1) --------->ZAT14      --------->ANAC58                  <---------ARR14(2)--------->LBD16 ------>NtERF2 <---------ZAT14      --------->ANAC58 --------->RAP2.6(3)--------->MYB46(3)        <---------ALFIN1 <---------ZAT18 --------->ANAC58     <---------ARR14(2)--------->ARR14(2)<------NtERF2  --------->DEAR3(1) --------->ZAT18 --------->ANAC46     --------->ARR14(2)<---------GLK1(2)--------->RAP2.3(2)<-------- ---->DEAR3(1)   --------->ANAC58   <---------SPL7 --------->MYB52(1) --------->ANAC46--------->O2 -->NtERF2 <-----------HVH21<---------HSFC1(2)  --------->ANAC46<---------MYB52(1)<-----------GT1   gagtgcacgtgctggtcacaaggcaaacaaagcttcgccgtatcggctctacaaaacagaaccgccgttctctcgccgcaaaattcacacgccaccacac  14197100  --------->ZAT14  <---------ZAT14 ---ALFIN1                                                                             <------ZmHOX2a(2) --ZAT14                                         --------->TOE2(3)                    <---------ARR11(3) ->ZAT14                              --------->TOE1(3)               <<<<<<<<<<<<<<<<<LFY          - --ZAT18 --------------->AtSPL8 <---------------AtSPL3            --------->AHL20(2)  --------->ARR11(3) >AtMYB61<---------------AtSPL8 --------------->AtSPL8 <---------ARR11(3)   --------->ZAT14       --- -ALFIN1 --------------->AtSPL3 <---------------AtSPL8 --------->ARR11(3)  --------->ALFIN1  --------   tctctgtagtagaagtacccattttgtgtttaagatggtaccttcacaatcccttaaaatctcgctgattttatacagtggagaataagatcaagatgac  14197200                                                                              ----------->HVH21 -------->DAG2             >>>>>>>>>TBF1         --------->TOE2(3)    <---------ARR14(2)        <---- ------->DOF2           >>>>>>>>>TBF1         <---------GLK1(2) <----------DOF2 ---------->DOF2 ----- --->TGA1      ------>ZmHOX2a(2)--------->At4g35610 ---------->DOF2   --------->ARR14(2)  >>>>>>>>>TBF1   gaaaggtgatgaagtgatcgatggaagaagaagaagatgacatagacataatctcaaagtctcaagctttcggttttgcagtgaaaggagaagaagaaga  14197300                                                                            <------------CBF                                                                           --------->ATHB12                                                                           <---------ICU4                                                                           --------->ATHB51                                                                           -------->HAHB4                             --------->HSFB2a(2)                           <--------ATHB1                             <---------HSFB2a(2)                          <---------AHL20(2)                  --------->MYB52(1)                             <---------ANAC58                <---------MYB59                                  <---------ANAC55(2)              --------->ARR11(3)                               <---------AHL20(2)             --------->RVE1(1)*TSS                         --------->AHL20(2)           <---------ZAT14             --------->CCA1(1)--------->LBD16              <---------AHL20(1)        <----------DOF2      <---------WOX13(1)    <---------LBD16                <---------AHL20(2)   --------->At4g35610    --------->ATHB12     <---------SPL7                    --------->AHL20(1)<---------WOX13(1)   <---------AHL20(2)   <---------REM1(1)            --------->ANAC55(2)  <---------ATHB51   --------->AHL20(2)<-----------RAV1(1)       --------->AHL20(2)<---------ANAC58  <------NtERF2 -----ARR11(3)<-----------ARR10      --------->DAG2  ----------->GT1      --------->AHL20(2) ---->ARR11(3)<---------ARR11(3)    ---------->DOF2 <---------TOE2(2)     --------->ICU4--------->ZAT14   tgtcattaattgaaaatatctaactgttgtaccggaaataaagttgcatttacataggtaattaattacttgagaaataattggctgcattacagtgtat  14197400                                            --------->ANAC58                                      --------->ANAC58                                      --------->ANAC46                                  --------->CCA1(2)                                  <------ZmHOX2a(2)                           <----------DOF2  --------->ANAC58                 --------->At4g35610  --------->ANAC58                 <---------ANAC58--------->AGP1                 <---------ANAC58<---------ARR14(2)              <---------WOX13(1) --------->ARR11(3)             <------------CBF    --------->ARR14(2)            --------->ATHB12    XXXXXXXXXXXXXXXXXXXX>MIR403           <---------AHL20(2)   <---------At4g35610           --------->AHL20(2)   --------->At4g35610              <---------At4g35610       <-------TEIL    <----------DOF2--------->AtLEC2           --------->At4g35610    --------->ATHB51   --------->MYB59  ------>NtERF2<-----------ARR10 <-----------GT1                      --------->ATHB12   ggatttaggcacattaattggctgcctttctttcagatccacgcacaaggattttagcccatgtttctgctaagcccaattctaagcccattatttggat  14197500                                                                                       --------->ATHB51                                                                                       <---------ICU4                                                                                       --------->ATHB12                                                                                      --------->ICU4                                                                                      <---------YAB1                                                                                    <---------ICU4                                                                                    <--------HAHB4                                                                                    --------->YAB1                                                                                    <----------------                    <---------YAB1                                                 <---------YAB1                    --------->ICU4                                                 --------->ICU4               --------->ANAC46<------ZmHOX2a(1)                                  <---------ARR11(3)             <---------DOF5.7(2)   --------->GLK1(2)                          <---------At4g35610           --------->DOF5.7(2)----------->GT1                               <---------HSFB2a(2)       ========================HOX2a_HOX2a                                  --------->HSFB2a(2)       <------ZmHOX2a(1)==============HOX2a_HOX2a               ----------->GT1   --------->ARR11(3)   <---------MYB52(1)   ------>ZmHOX2a(2)       <---------------------WRI1  <-----------RAV1(2)   gggacgttaggatgttaacgacatgatcgataaggagaatatttcacatgtacgaagtttactaactcgtaaatcgttccagatgatcattatttggcaa  14197600                                      --------->ARR14(2)                                <------ZmHOX2a(1)                      <---------AHL20(2)  ------>ZmHOX2a(1)                                         <                      --------->AHL20(2) --------->TOE2(3)                            <---------ARR11(3)                    --------->AHL20(2)<---------ARR14(2)                              --------->GLK1(2)                   <---------AHL20(1)--------->GLK1(1)                       --------->GLK1(1)     <-                   --------->AHL20(1)<---------CCA1(2)        --------->ANAC46        --------->ARR11(3) -AGL3             <---------ARR11(3)<---------GLK1(1)      <xxxxxxxxxxxxxxxxsmallRNA(s)        <----   tttagaaaacaaataagtcaatatatatatactaggaacatatcctaaatccagccatgaattcacaccaagtatccaaatatccaaaaatcttgcaagt  14197700          --------->ARR11(3)           <---------AtLEC2                                         <----  <---------REM1(1)                  <---------YAB1                                             <---- -------GAMYB                     --------->ICU4                          --------->ARR11(3) <------- ----------RAV1(1)       --------->ZAT18                                 <---------CCA1(2)  <-------- -----ARR11(3)           <---------ZAT14        --------->YAB1   <<<<<<<<<<<<<<<<<LFY       <--------   tctgttgtagcacatcttgaaacattgtgcaatgtcattttgaatgtcaataacaacattctatttttgacattggtatcttggtaacgagattgctttc  14197800  Previous    Next  AGI:  At2g33500.1    Description:  zinc finger (B-box type) family protein. Identical to Zinc finger protein CONSTANS-LIKE 14 (COL14) [Arabidopsis Thaliana] (GB:O22800;GB:Q8H0T2;GB:Q8L7Q6); similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT1G28050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70072.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 14195063    to: 14197330    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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