Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->AHL20(2)                            ------>ZmHOX2a(2)                          --------->ARR11(3)       <-----------GT1                          <---------ARR11(3)  <---------AHL20(2)                   --------->ARR11(3)     <---------AHL20(2)              <---------YAB1            <                   <---------ARR11(1)    <---------AHL20(2)  <---------WOX13(1)                     < ------>ARR11(3)   <---------ARR11(3)<---------AHL20(2)    --------->ATHB12--------->YAB1      ------ -----YAB1        <---------CCA1(2) <---------AHL20(2)    <---------YAB1<----------DOF2      <-------   gattttggttttagttaaacatatctttgatcttcaaattttttttatttttttttcggtttgattgaaacttacttttatagtttgattttcagattga  14190200                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                         --------->ZAT18                                                                                     <---------ICU4 <                                                   --------->ICU4                    --------->ATHB12                                              ----------->GT1                       <---------AHL20(2)                                              --------->YAB1                        --------->AHL20(2)                                           -------->HAHB4                         --------->TOE2(3) -                                           -------->ATHB1                        <--------HAHB4     <                                           --------->ATHB51                      --------->ATHB12   <                                           --------->ATHB12                      --------->YAB1    --                                           <---------AHL20(2)                    <---------ICU4   <--                                           <---------ICU4                       <---------ATHB12 ----       ------->TEIL                       --------->ICU4                        --------->ICU4   ---- ---------YAB1                            <---------ATHB51                      <---------YAB1 ------ ---------TOE2(3)                         <---------YAB1                    ------>NtERF2<---------ZAT18 --->ATHB12                          ----------->GT1     ---------->DOF2 --------->At4g35610 <-------PIF5 --WOX13(1)                <---------TOE2(3) <---------YAB1              <---------At4g35610 ------->PIF5   ttaagaatgaatcggtttgataaaactctaatgtaaatggagtaattattgtaatattcaaaagcctaaaccatttgctgccatcattaattgcacttgc  14190300      --------->YAB1     --------->ICU4     <---------YAB1 -------->TGA2(1) ---------->GT1 -------->ANAC58 -------->bZIP60(1) ---------TGA2(1) -------->ANAC58 ---------bZIP60(1) -------->ANAC55(2)                                  --------->ANAC58 ---------ANAC46                                     --------->ANAC58                         ------- ---------ANAC55(2)        ------>ZmHOX2a(2)       <------ZmHOX2a(1)                          ------- --------->STF1            ===============================HOX2a_HOX2a                    ---------->DOF2 -------TGA2(2)        <---------YAB1    ----------->GT1                <----------ID1 <------ZmHOX2a(2) ------->TGA1      --------->YAB1 ----------->GT1 <----------ID1 ---------->DOF2 <<<<<<<<<WRKY18    < ------->HVH21     --------->AHL20(2)  <------------CBF---------->DOF2--------->CCA1(2)============== --->At4g35610  --------->YAB1  ---------->DOF2---------->DOF2--------->GLK1(2) --------->WRKY18(1) <   tgacgtaattataagcgagaataatatgatcccaaaaagaaaattgataaaaaggacgaaagagaatcaaagagacgacgaagtcaaggatcaaagcctt  14190400                                                                                           <---------TOE1(3)                                                                                     <---------YAB1                                                                                     --------->ICU4                                                                                   <--------HAHB4                                                                                   <---------ICU4                                                                                  --------->ICU4      ------>ZmHOX2a(1)                                                      ------>ZmHOX2a(1) -->TOE1(3)              <---------AHL20(2)                                  --------->LBD16 -->TOE2(3) ------------>CBF  <-----------GT1                               <---------LBD16<---------TOE2(3) ----------DOF2     <---------DAG2                        ------>ZmHOX2a(1)----------->RAV1(2) ============HOX2a_HOX2a<---------AHL20(2)            <-----------GT1    <-----------GT1<---------YAB1 ---------DAG2      <----------DOF2               <----------DOF2 <---------YAB1  <---------YAB1   aacttttcctctaaaacaatcgcttttttatttttctaaatttctctctgttcttttttcctctggttttgattttttcctggcattattattagggttt  14190500                                                         ------>MYB83                                                         ------>MYB46(1)                                                         -------->P                                                       <---------MYB46(2)                                                       <---------MYB111(2)                                                       <---------MYB111(1)                      <----                               ---------->DOF2       ------->TEIL                              ------                      <------NtERF2                  -------->P                   <-----------GT1   X                    <---------ANAC58           <------ZmHOX2a(2)            <------NtERF2   <--------                    <---------ANAC46      ------->TEIL <---------MYB59   ---------->ID1     <--------                    <---------ANAC58<----------ID1--------->At4g35610<----------DOF2        ---------   ttttcatacgttgttgaaaatggcgtagttggagaaaggagacgaatcgatcatctacctacttgcccattctttgtcgtcgtttttcgattttccttga  14190600                                                                                                <----                                                                                         <------ZmHOX2a(2)                                                                                        --------->ARR14(3)                          --------->YAB1        <---------ANAC46                        --------->AGP1                         <---------ATHB12       <---------TOE2(1)                       <---------ARR14(3)                     ------------>CBF           <---------TOE1(1)                       --------->ARR14(2)    <------NtERF2   ------>NtERF2              <-----------------------TaNAC69(2)       <---------ARR14(2)   --------->LBD16 <---------ETT(1)          --------->ARR14(2)                         --------->ARR11(3)  --------->DEAR3(1)--------->LBD16          <---------ARR14(2)                         <---------ARR11(3) <---------LBD16   <---------LBD16          <-------GAMYB                              --------->GLK1(1) -----GLK1(2)     <---------LBD16          <---------DEAR3(2)                  --------->MYB52(1) --->ATHB12     <---------ARR14(2)         <---------MYB46(3)              ---------->DOF2------>ZmHOX2a(2) XXXXXXXXXXXXXXXXXXX>MIR391             ------>NtERF2--------->ALFIN1  ------->TEIL    <---------GLK1(1) -ANAC58        --------->ARR14(2)      ------------>AtMYB77      --------->YAB1      ----------->ARR10 -ANAC58     <---------ANAC58          --------->DEAR3(1)       --------->ANAC58  --------->LBD16 >TOE2(3)    <---------ANAC58          ----------->HVH21        --------->ANAC58<---------LBD16 -----   ttcgccggagaaatagcgtttccggcaatgaaaacctctctccgacggttacgaggtgtgcttcacaagcatgaatctaaagaccggagagatcttcgag  14190700                           <---------GLK1(2)                          <---------HSFC1(2)                          --------->HSFC1(2)                                                <--------                         --------->ANAC58                                                   ---------                 <---------ANAC58        ------>MYB46(1)                                   --------->MYB52(2)                 <---------ANAC58<---------TOE1(2)                                       <---------MYB52(1)        ---------->DOF2  --------->ANAC58------>MYB83                         <---------MYB52(1) -----ZAT2      --------->At4g35610     --------->WOX13(1)    <---------ARR14(2)     <-------GAMYB ---->ZAT2      --------->ZAT2  <-----------RAV1(2)           --------->ARR14(2)  <-----------GT1   ctctggttcagaaagatgagcttgcccaagcttctcaggtaccaatctctatctcaccaattcgaatttggactgttttcgttttttcgttgttagctgt  14190800                                                                                                 <---                                                                                                -----                       --------->ARR14(2)                             <---------ATHB12          <----                      <---------CCA1(2)                               --------->ICU4            <----                    --------->YAB1                                    <---------YAB1            -----            --------->GLK1(2)                                   <---------ZAT6  --------->MYB52(1)           <---------GLK1(2)                                <---------ZAT14    <---------ARR14(2)---- --------->ICU4    <---------ATHB12                      <---------TOE2(3)    <------ZmHOX2a(1) <---- <---------YAB1  --------->WOX13(1)               <---------------AGL15     <---------TOE2(3) <XXXXXX -At4g35610<---------ARR14(2)                     --------------->AGL15--------->ATHB12 <---------YAB1 >At4g35610--------->ARR14(2)  <----------DOF2   ----------------->AGL3<--------ATHB1   --------->ICU4   ttgatgatgaggcgattctcaatcatatcgtcgctctaggtggaattagtttccaatttaagtttagtgacaatgatttaggaaacggtgatgattcaga  14190900            <---------AtMYB61   --------->ANAC46   --------->ANAC58      <---------At4g35610   --------->ANAC58 ------>ZmHOX2a(2)                                 --------------->AGL15 ------RVE1(1)      ==================HOX2a_HOX2a                     <---------------AGL15 ---->ARR11(3)    --------->ARR11(3)                                  <----------DOF2     ------>ZmHOX2a(2) -----ARR11(3)    <---------ARR14(2)                                 <-----------------AGL3 -----GLK1(2)<---------ANAC46  ------>ZmHOX2a(1)               --------->ANAC55(2)      <---------ARR11(3) ---->ARR14(2)    <---------AGP1                              <---------TOE2(3)         --------->ARR11(3) ----->GLK1(1)    --------->ARR14(2) <---------AHL20(2)      <-----------GT1          --------->MYB59 -----ARR14(2)  <---------MYB46(3)  --------->AHL20(2)    <----------DOF2    ----------->GT1    <---- XXXXXXXXXXXXXXMIR780.2 <---------ARR11(3)   <---------At4g35610     <-----------------AGL2 <--------   tattcacgaaaattgtggtggatctagagcttcctcgatttaatctgagcttctctgtagcttttacgttttctttatctggttaagttagatcgtctct  14191000                  ---------->DOF2               <---------WOX13(1)             ------>MYB83             ------>MYB46(1)           <---------MYB59         -------->P         ------>MYB83       <---------MYB59          <---------ANAC58       --------->AtMYB61        <---------ANAC58    >>>>>>>>>>WRKY43           <-------TEIL    >>>>>>>>>>WRKY38        <------MYB46(1)    >>>>>>>>>>WRKY26        <------MYB83                        <---------TOE2(3)    <---------WRKY18(1)     <---------HSFB2a(1)     <---------ZAT14                        ------->TEIL   --------->WRKY38(1) --------->ALFIN1             <---------ZAT18                        <--------- --------->ANAC55(2)--------->DAG2 <---------AtMYB61--------->ZAT14                     <---------REM1(1) ------DOF2--------->TOE2(3)<---------HSFC1(2)   <---------At5g28300                   <---------TOE2(3) -CCA1(2)------>MYB46(1)    --------->HSFB2a(1) <-----------GT1<-----------GT1   --------->ARR11(3)   ttcacttgaccaacctaattgaaaggtggaaggtgcttaggtgtttcaatttactgctctctgttttacgatgagattaatgagatgttgatgtaactgg  14191100  Previous    Next  AGI:  At2g33490.1    Description:  hydroxyproline-rich glycoprotein family protein. Identical to Uncharacterized protein At2g33490 [Arabidopsis Thaliana] (GB:O22799); similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G26910.1); similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G26910.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO70075.1) Range:  from: 14190628    to: 14194945    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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