Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <------ZmHOX2a(1)                      --------->CCA1(2)       ----------->GT1                        --------->ARR11(3)                                  --- -------------->AGL15                         --------->ARR14(2)                       --------->LBD16 ---------------AGL15                    --------->AtLEC2                 --------->ZAT14         --- ----------------AG                     ------->MYC2                      <---------ZAT14      ------ ------>ZAT2                            <-------MYC3              --------->At4g35610 <---------HSFB2a(2) -------ZAT2                            <-------MYC2              <---------At4g35610 --------->HSFB2a(2) -------At4g35610                   <---------REM1(2)      <---------AHL20(2)      <---------ARR14(2) ------>At4g35610         --------->MYB46(3)  <---------ARR14(2)  --------->ZAT2  --------->GLK1(1) -----HVH21        --------->MYB46(3)   ------->MYC3       --------->AHL20(2)     <---------GLK1(1)   agctccataaggaaaattgaaacagccaacaatctctctacacatgcagatatagaactatttaaatcagctccattacagtggaaatccagaacaagaa  14185300                                                           --------->ANAC58                                                           --------->ANAC46                                                           --------->ANAC58                                                          --------->WOX13(1)                                                         ---------->DOF2                                 ------>ZmHOX2a(2)      <---------ATHB12                                --------->CCA1(2)      ------>MYB46(1)                                <------ZmHOX2a(2)      ------>MYB83                               >>>>>>>>>GATA-3        --------->WOX13(1)                               --------->AGP1        --------->AtMYB61    <---------ICU4             >>>>>>>>>GATA-2       --------->MYB46(3)  <---------AHL20(2)           <---------ARR11(3)------>ZmHOX2a(2)  --------->AHL20(2)           --------->ARR11(3)--------->MYB46(3) ------>YAB1                   >>>>>>>>>GATA-1  <------ZmHOX2a(2)             <---------ANAC46      - -------->GT1   ------->GAMYB  >>>>>>>>>GATA-4 <---------ARR14(2)             <---------ANAC58      - --->YAB1   --------->MYB46(3)--------->GLK1(1)--------->ARR14(2)             <---------ANAC58-------   tcataaaaatggcatcaaccgaatcgatacagagatctaatttcaattggatccaccaatcaagcaagagcatcaaaacagcgtgagaagaaacaataaa  14185400                                                                                       <----------DOF2                                                                                    <---------TOE1(2)                                                                                    ------->TEIL               <---------ARR11(3)                                       <------ZmHOX2a(1)               --------->AGP1                                           ===============HOX2a_HOX2a               --------->ARR11(3)                                <---------LBD16  <---------SPL7       --------->ATHB51                                      ----------->HVH21   ------>ZmHOX2a(2)       <---------ICU4                                     ------>ZmHOX2a(2)     --------------->AtSPL8       -------->ATHB1                                     =====================HOX2a_HOX2a <---------ANAC58      --------->ICU4                                    --------->ARR11(3)     <---------ARR11(3)      <---------ATHB51                            <---------TOE2(3)     ================HOX2a_HOX2a      <---------YAB1                         --------->GLK1(2)  <---------ANAC46<---------------AtSPL3 -------->ANAC58 ------>ZmHOX2a(2)           <-----------ARR10--------->MYB52(1)<------ZmHOX2a(2) -------->ANAC58<------ZmHOX2a(2)            ------->TEIL--------->GLK1(1)     --------->ARR11(3) -->AHL20(2)<---------HSFB2a(2)        ----------->TGA1 <---------ARR11(3) ---------->DOF2 <---------ANAC58   acaagacaattattcgagatctattgattcaatggacgagaatgacgaatctaaggctgatctctaacggggaaggagaaagatcgtacctttgcctgag  14185500                                 <---------LBD16                       --------->GLK1(2)                       --------->ARR14(2)                                           <-----------GT1                      <---------GLK1(2)                                         <----------DOF2                  <------ZmHOX2a(2)                                <---------HSFB2a(1)         --------->ALFIN1  <---------At4g35610                     --------->HSFC1(2)      --------->DAG2  <---------ARR14(2)               <---------LBD16    <----------DOF2         ---     --------->DAG2   --------->ARR14(2)            <----------DOF2<---------HSFC1(2)             <--    ---------->DOF2 ----------->ARR10 --------------------->WRI1   --------->HSFB2a(1)--------->ANAC46   aattgaaaaaggtgggatggatcagattctgctactctgggattgtgttcttcgctctctggagttagaaatttctctttctctttaaacggctctcgtt  14185600                                          --------->GLK1(2)              ----------->GT1           --------->HSFC1(2)              <---------ZAT6            --------->HSFB2a(1)         <---------ICU4                 <---------HSFC1(2)         <--------ATHB1             ------->GAMYB         -------->HAHB4            --------->ANAC58         --------->YAB1            --------->ANAC58         --------->ATHB51        --------->MYB52(1)        <---------YAB1        --------->ANAC58        --------->ICU4        --------->ANAC55(1)                               --------->ANAC58        <---------ATHB51      --------->ANAC55(2)                               --------->ANAC58      --------->YAB1          <---------ANAC55(2)                               --------->ANAC46    --------->AHL20(2)        --------->ANAC58                       <----------DOF2 ------>HSFB2a(2)             --------->ANAC46  ---------->DOF2   --------->ARR11(3) -------HSFB2a(2)    --------->ANAC46   <---------HSFB2a(1)       <---------ARR11(3)   ttagaaaataataattgtgttaaacgcctaaaacgtaacggaagtttctgaaaagccctaacatttagtatctttcaattacacccatttcatagaaaat  14185700                                              <<<<<<<GRF7                                    --------->ARR14(2)                                    <---------ARR14(2)                                   ------>NtERF2                           *TSS------>ZmHOX2a(1)                         <------MYB46(1)                        <---------ANAC58    ------>ZmHOX2a(1)            <------MYB83                  <-----------GT1 ----------->HVH21            <---------MYB46(3)              --------->AHL20(2)<---------At4g35610       <-------TEIL <--------P                ----              <---------AHL20(2)<---------LBD16       ----------->GT1<---------REM1(1)          <----       --------->ANAC46 <---------ANAC58    ----------->HVH21  <-----------RAV1(1)        --------->CCA1(2)   gtagaaaacacacagttttattacatgcttgtcctgcggaccggtcctgacatatgaagttacatttgttgttgtaggtgtttcatcttgatatatgaga  14185800                                                                                             <-------                                                                                             <------MYB46(1)                                                                                            ---------                                                                                          <---------MYB52(1)                                                                                         --------->ZAT2                                                                                         <---------ZAT2                                                                                         <---------At4g35610                                                                                         --------->At4g35610                                                                                         <-------GAMYB                                                                                        --------->MYB52(2)                                                                                        <---------MYB46(3)                                                                                       <-----------RAV1(2)                                                                                     <-----------HVH21                                                                                   <---------MYB46(3)                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                             <---------AHL20(2)                   <---------ANAC58           <---------AHL20(2)                --------->AHL20(2)                   --------->ETT(1)          --------->AHL20(2)          --------->ANAC46                      --------->GLK1(2)<------MYB83      ----------->GT1           <----------DOF2                  --------->DAG2 <-----------HVH21 ----->GLK1(2)          ------>MYB83<-----------GT1             ---------->DOF2====================RAV -----GLK1(2)           ------>MYB46(1)<---------MYB59       --------->AHL20(2)<-----------RAV1(1)  -   ttctcaagtggataaaatttgaaaccaaacaaggctttataccgaatttttttagataacaaaataaaaagtgaagagattatgtcgggtcagttgggtc  14185900                                        <-------GAMYB                                       <---------MYB46(3)                                       --------->MYB55(2)                                       --------->MYB52(2)  <------MYB46(1)                                     <---------MYB52(1)    <------MYB83                                   <---------ANAC46     <---------ANAC58 --ANAC46                          <---------ANAC58     <---------ANAC58                        ----- >MYB59                    <-----------GT1     <-----------GT1      <----------DOF2            <----- -------->YAB1  ----------->RAV1(1)<---------ANAC58  <---------ATHB12          --------->MYB52(2)   tatagtactcgagtattgccacataatagtttccatttcgtttgttgattttccaatcgcttggtcaaaactttagcatgttagttcattatccatagat  14186000                                                                   <---------AHL20(2)                                                            <---------YAB1                                                          <----------DOF2                                                      <---------ZAT14                                                      --------->ZAT18             --------->YAB1       <------MYB46(1)                          --------->YAB1     <---------AHL20(1)       <---------MYB46(3)                  <---------AHL20(2)      --------->AHL20(1)       <------MYB83              <---------MYB52(1)   <---------ZAT18            <---------YAB1      <---------AtMYB61         --------->At5g28300   --------->ZAT14  ----------->GT1  <---------LBD16     <--------P                ----------->GT1 <---------YAB1      --------->ARR11(3)  ----------->RAV1(2) ---->GLK1(2)            <---------ICU4    --------->AHL20(1)   --------->YAB1 ----------->GT1 ----GLK1(2)       <---------At4g35610     --------->AHL20(2)--------->YAB1    --------->YAB1   tctaggggttggtttgttttcatctaattaagaccgtaactcaaataaaatgatagttcactttgataatattttgtgaaattgtaataacctggattag  14186100        --------->LBD16        ------>ZmHOX2a(1)       <---------LBD16    <---------ARR11(3)    --------->ARR11(3)    <---------ARR14(2)                                      --------->ANAC58                   <-----    --------->ARR14(2)                           ---------->DOF2     ----------->GT1     ---------->DOF2   --------->RVE1(1)                       --------->YAB1   --------->ANAC58          --------->ANAC58   --------->CCA1(1)               <---------WOX13(1)--------->TOE1(3)                --------->ANAC58   tagaaatatcctggattagtagaaatataaacgagtaattgactatcacaataaagcttaacaagccgagtgagtaacaagtatgagcaagtaaagtatc  14186200  Previous    Next  AGI:  At2g33470.1    Description:  GLTP1 (GLYCOLIPID TRANSFER PROTEIN 1); glycolipid binding / glycolipid transporter. similar to GLTP3 (GLYCOLIPID TRANSFER PROTEIN 3), glycolipid binding / glycolipid transporter [Arabidopsis thaliana] (TAIR:AT3G21260.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO71432.1); contains InterPro domain Glycolipid transfer protein, GLTP; (InterPro:IPR014830) Range:  from: 14183439    to: 14185727    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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