Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->ALFIN1                           ----------->RAV1(2)   ----------------->AGL1                        <---------At4g35610              --------->YAB1  ------>NtERF2                           <---------ARR14(2)                      <---------ICU4 ------NtERF2                             --------->ARR14(2)                      --------->ATHB51 --------ATERF1(1)                       ------>ZmHOX2a(1)                        <--------HAHB4 --------DEAR3(2)               --------->ETT(1) <---------GLK1(1)   <---------At4g35610 -------DEAR3(1)              <-----------HVH21 ------->TEIL         --------->At4g35610  --------->MYB46(3) -------HVH21        <----------DOF2<---------GLK1(1)      <----------DOF2       --------->AHL20(2) -->DEAR3(2)  ----------->RAV1(1)   --------->GLK1(1) ------>ZmHOX2a(1)          --------->ICU4   tcggagccaatgtgggcaacatgctttacatcggtcggaaatcctatctgcatctcctgctctttctcttcatctgcaatagaataattacatccaccat  14182500                 --------->ANAC46                 --------->ANAC58          <-----------GT1                 --------->ANAC58       <---------AHL20(2)                                    -------       <----------DOF2            <-----------GT1                                --------->GLK1(2)      >>>>>>>>>>>>WRKY18    <---------ATHB12          <---------LBD16            <---------ARR11(3)   gtaatttgacttttgacacaagaaacacaaatgatttttcatttttttcatgtttatggggaaaatgaatgagactcaccaaaaatctgagtaatgtaac  14182600                                                                                 --------->CCA1(2)                                                                                <---------ARR14(2)                                                        ------>NtERF2         --------->LBD16                                                        --------->LBD16      <---------ANAC46                                                       <---------ANAC46     <---------LBD16                                                       <---------RAP2.6(2)===========================                                                      <---------LBD16     <---------TGA1a                                                    <---------ARR14(2)    =========================bZIP_DOF                                                    --------->ARR14(2)    --------->ANAC58                                                  <------MYB46(1)         --------->ANAC58                                                  <------MYB83     <---------ARR14(2)                                                  <---------MYB46(3)      --------->ANAC46                                                  --------->MYB52(2)      --------->O2                              <------NtERF2       <---------DEAR3(2)      --------->TGA1a                             ------>NtERF2       <---------AtMYB61 --------->ARR14(2)                           <------NtERF2         --------->MYB111(1)    <---------ALFIN1<----------DOF2                           --------->ATERF1(1)  <--------P         ------->TEIL --------->ARR14(2)                          <---------ATERF1(1)   ====================================MYC_MYB             <---------ARR11(3)           ==========================================bZIP_DOF <------- -->MYB52(1) --------->ARR11(3)           ---------->DOF2         <---------CCA1(2)    --------->TOE2(3)   gaaggcccttaagaagacccttcattgtcgtcgccattggtctataaagggttggttccggctaatgtgtatccacacgccggatacaacctttgtggtt  14182700                 --------->TOE2(3)               <---------At5g28300               <---------DOF5.7(2)             --------->DOF5.7(2)            <-------GAMYB           ------>ZmHOX2a(2)          <------ZmHOX2a(2)                                      --------->DAG2  --------->CCA1(2)       ------>MYB46(1)                       ---------->DOF2 --------->ARR14(2)       ------>MYB83                     --------->ANAC58 <---------ARR11(3)     <---------MYB59      <----------ID1----------->GT1                    ------- ===================MYC_MYB          ---------->DOF2       --------->ANAC58                --------->MYB52(1) --MYB46(3)<---------MYB46(3) --------->AtLEC2          <---------ATHB12 --------->ANAC46  ----------   caagatttgacgatcgttaccgtaaacctaacatgcagaaaaagaaaacgaagaacaaatcaagaaaaaagttgtaaggcacaaacaaaaaaacaacaga  14182800                                      <---------GLK1(2)   --------->MYB52(1)          --------->ANAC58   <-----------GT1             --------->ANAC58 >GAMYB <---------GLK1(1)--------->TOE1(3)                 --------->AHL20(2)                     xxx ->RAV1(1)               --------->TOE2(3)          ----------->GT1                           <xxxxxx   gaatataacgaaatctgaagacttaaaccttgaacgcatggattttctcttgacgagaaaaaaaaatgttgaaatgttttgaagagagagagagagggag  14182900                             --------->HSFB2a(2)                             <---------HSFB2a(2)                         ==============HOX2a_HOX2a                         ------>ZmHOX2a(2)                        --------->GLK1(1)                        ===============HOX2a_HOX2a                        <---------GLK1(1)                        <------ZmHOX2a(2)                       --------->ARR14(2)                       --------->ARR14(3)                       <---------ARR14(2)                       <---------ARR11(3)                       --------->ARR11(3)                 ------>ZmHOX2a(2)                 ======================HOX2a_HOX2a               <---------ARR14(2)                     ------->GAMYB              <------ZmHOX2a(1)      <------------CBF--------->MYB46(3)              =================HOX2a_HOX2a       ===============================HOX2a_HOX2a              ==================HOX2a_HOX2a     <---------ARR11(3)              *TSS    <---------GLK1(1)         --------->ARR11(3)                       <-----------RAV1(1)             --------->HSFC1(2)     --------->ATHB12--------->At4g35610       --------->ZAT14             <---------HSFB2a(1)<------ZmHOX2a(1)<------ZmHOX2a(2)            <---------ZAT14             <---------HSFC1(2) ========================HOX2a_HOX2a           <---------ZAT18 xxxxxxxxxxxxx>smallRNA(s)   --------->LBD16---------->DOF2              <------ZmHOX2a(1) xxxxxxxxxxsmallRNA(i)--------->GLK1(1) <---------MYB46(3)   ---------->DOF2  --------->ZAT18   ggagggagagagagaaggatcgagagatctccgaggagttattggttaaagatcaacagaccaaaaagaagaagaggaagagcactaagttttgttgttg  14183000                                                                                 <---------MYB46(3)                                                                                 --------->ATHB12                                                                                <---------YAB1                                                 <---------YAB1      --------->YAB1               <---------AHL20(2)        --------->YAB1              <---------ICU4               --------->AHL20(2)   --------->AHL20(1)              <---------YAB1            -------              <---------AHL20(2)    <---------AHL20(1)              <---------AHL20(2)        -------              --------->AHL20(2)    --------->ARR11(3)           <---------AHL20(2)  <------MYB83  <-        <------ZmHOX2a(1)           <---------ARR11(3)          --------->AHL20(2)   <------MYB46(1)        ----------->GT1     ---------->DOF2    ----------->GT1  <---------AHL20(2) <---------WOX13(1)       ----------->GT1  ---------->DOF2 <---------YAB1--------->MYB52(1)     <---------MYB46(3)<-----   ttttaacagaggataaaaaaatttagaaaagaaagaaatattttcatagttgtaattaacagataattttataattagattgttgattggtaatggaggc  14183100                                                             <-----------HVH21                                                           --------->LBD16                      --------->HSFB2a(1)                 <---------ANAC58                      <---------HSFB2a(1)                 <---------ANAC58                      --------->HSFC1(2)                 <---------LBD16             --------->ANAC46              ---------->DOF2                       <---------ARR14(2)             <---------ALFIN1 -->ANAC58  <---------YAB1                          <---------ARR11(3)             --------->AtMYB61 -->ANAC58--------->YAB1          <----------ARF1   --------->ARR11(3)         --------->ANAC58 --------ANAC46       <---------HSFC1(2)            --------->ARR14(2)         --------->ANAC58 -NtERF2 <---------YAB1     <----------DOF2        <------ZmHOX2a(1)     <------ZmHOX2a(1)  <--------   aacgtagagctattatcaaagggaaccctcctttgggaaacaagttgtcaagaggattttccgggtcgaatggaaggagacacgaccacaccaatttctt  14183200                                                                                          <---------ARR11(3)                                                                                          --------->ARR11(3)                                                                                         --------->GLK1(1)                                                                                         <---------GLK1(1)                                             <---------YAB1                         ----------->GT1     --------->YAB1                    ---------->DOF2                       ----------->GT1 <-----------GT1                  ----------->GT1                        <---------ARR14(2) -ARR11(3) --------->YAB1     <---------TOE2(3)                          --------->ARR14(2)   attttactaataaacatactctaatgaaatctaagatagtataaagtattatttagagaaattgcatagattgcaaatactgaaaaatgtgatatctgaa  14183300                  <---------ARR11(3)                  <---------GLK1(2)                  --------->ARR11(3)         <---------ICU4         --------->ATHB12         <--------ATHB1         --------->ATHB51         -------->HAHB4        <---------ATHB51        --------->ICU4        <---------YAB1      --------->YAB1                                                              <-----------GT1  --    <---------ARR11(3)          --------->ANAC58                          ---------->DOF2<---------YAB1    --------->ARR11(3)          --------->ANAC58                       --------->TOE2(3)<---------AHL20(1)   --------->YAB1<---------RVE1(1)                                     --------->YAB1--------->TOE2(3)  <---------TOE2(3)         --------->YAB1       <----------DOF2 <-----------GT1<----------DOF2<-----   tactaagataataattgagagattttgcaatagtaagcaaaatggtttgaactttgaagcatgagatttactatcttaaagactttacattattttttaa  14183400  Previous    Next  AGI:  At2g33460.1    Description:  RIC1 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 1). similar to RIC3 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 3) [Arabidopsis thaliana] (TAIR:AT1G04450.1); similar to desiccation-associated protein [Lilium longiflorum] (GB:AAQ05795.1); contains InterPro domain PAK-box/P21-Rho-binding (InterPro:IPR000095) Range:  from: 14181666    to: 14182914    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version