Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------HSFB2a(2)                           <------MYB83                           <------MYB46(1)    <----------ARF1        <---------DEAR3(2)                           --------->TCP20             < <-----------HVH21         <---------MYB46(3)                           --------->TCP16(1)         <- -------->ALFIN1          --------->MYB111(1)                           <---------ARR14(2)     ------ ------->TOE1(2)          <---------AtMYB61                             --------->ARR14(2)   -------- -------ANAC55(1)        <--------P                                  --------->ALFIN1        <------- -------ANAC58          <-------GAMYB                            --------->SPL7              -------- ------>TGA1a          --------->ATHB12     -------->P          =====================================HOX2a_HOX2a -------TGA1a          <---------MYB46(3)--------->At4g35610    <------ZmHOX2a(1)            <------- -------O2             --------->MYB55(2)--------->HSFC1(2)     ===========================HOX2a_HOX2a ------>O2             <------MYB83      <---------HSFC1(2)    ----------->HVH21             <------- -------ANAC46         <------MYB46(1)  --------->ANAC58    --------->MYB52(1)               -------- -------ANAC55(2)     <---------AtMYB61 --------->ANAC58  --------->MYB46(3) <-----------HVH21<------ZmHOX2a(2) -------ANAC58  --------->ALFIN1--------->HSFB2a(2)  ------>NtERF2<---------DEAR3(1)------>ZmHOX2a(2)   acgtgtgagacaagtggaatggggatggttggttctggacagaagctacctatgcctccaactacaggacggtggaaccggtctgatccaaacacgatct  14169300          <---------YAB1         <-----------HVH21      <----------DOF2  --------->ZAT18  <---------ZAT18 ---------------AtSPL8 --------ANAC46 >ZmHOX2a(2) ->ARR14(2)                                                                            ----------->GT1 --ARR14(2)                                                                       <--------P ->ARR14(3)                       <---------ATHB12                              ----------->GT1 <---- --ARR11(3)              --------->ALFIN1                                  <---------ZAT14      ----- --ARR14(3)        --------->MYB46(3)                                      --------->ZAT14     ------ ->ARR11(3)        <---------MYB52(2)      ---------->DOF2                 --------->ZAT18   --------   tgagggtactttgtcatagaaacgaccgtgttgctaatcagtttttaaagaaatcgtttcaattgcctaaacgaaggtgaactggtaagaagtaagaaag  14169400                                        <---------TOE2(3)                                   <------MYB46(1)                                   <------MYB83                                   <---------MYB46(3)                                  <---------AtMYB61                                 <--------P   ----------->GT1             <-----------RAV1(1)   <----------ID1            <------MYB46(1) ---------->DOF2             <------MYB83 ------ID1                  <---------AtMYB61                              ---------->DOF2 ------>GT1              <-----------RAV1(1)                          ----------->GT1 ----->GT1              --------->ARR11(3)<------ZmHOX2a(1)   <---------ANAC46                      < -->DOF2           --------->AHL20(2)<---------REM1(1)     <---------MYB52(1)                   <----   gaaaaaagaaaaattcaacaaaaaaatatgttggtgttggtgaaggatgtgaacttgattcgttgtgtaaatgggttaaaagtatggttttcgagttttt  14169500                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                          <---------MYB52(1)                                                                         --------->TOE2(3)                                                                   --------->ARR11(3)                                                              ----------->GT1    <----------DOF2                                                           <---------TOE1(1)     --------------->AGL15                               <---------TOE2(3)   ---------->ID1  <---------ARR11(3)             --------->TOE2(3) <---------TOE1(3)  <-------GAMYB<------ZmHOX2a(1) <---------------AGL15 ---------At4g35610       <---------AtLEC2       <---------MYB46(3)--------->AHL20(1) -------RAV1(1)      <-----------RAV1(1)         --------->MYB52(2)<---------AHL20(1)   ggggctgatttgtaatctaaaaattgttgcattgaggttgaagagaattgtttgttgttttacgaggaaaatattcgttaattctttaattagatgtgtt  14169600                                                      ---------->DOF2                                         <---------ANAC58                                       <---------ARR11(3)                                       --------->ARR11(3)                          --------->ARR11(3)       <---------YAB1          <----------DOF2              <---------AHL20(2) <-----------GT1 --------->YAB1    <---------AHL20(2)            <----------DOF2   ----------->GT1   --------->ICU4    --------->AHL20(2)               <-      ---------->DOF2   <---------TOE2(3)<---------ANAC58        <XXXXXXXXXXXXXXXXXXXXXMIR402--------   cagaaatagaaagtctttatttgtttaagaaattgtaacaagttcttgcgatgatgaaaagaatgagatttaatgggctttgagcccaactcatgtaaag  14169700                                                       <---------ZAT14                                                       --------->ZAT14                                                      <----------DOF2                                                      <---------DAG2              <----------DOF2<---                                                <---------ARR14(2)     <---------MYB52(1) ------>ZmHOX2a(1) ---------DOF2  ----------->GT1            *TSS --------->ARR14(2)--------->TOE2(3)      --------->TOE2(3) -->DOF2       ----------->GT1         --------->AtMYB61  --------->ZAT6   --------->TOE2(3)   ------   cctttatagtatataagaagataaaaattcgaagataaaaaccaaaaccctatccactttactctaaacctccattaccttcgtctttcttcctcagtcg  14169800                                      --------->ANAC58                                      --------->ANAC58                                      <---------TGA1a                                      --------->TGA1a                                   ----------->HVH21                                  --------->AtMYB61                                 --------->O2                                 --------->ANAC46                                 <---------At4g35610                                 --------->At4g35610                                 --------->TGA1a                                 --------->bZIP60(2)                                ------>NtERF2                               --------->DEAR3(1)                               <---------ALFIN1                              <------NtERF2                              --------->DEAR4(2)                             <---------ATERF1(1)                             ------>NtERF2                             <-----------HVH21                            --------->ANAC58                            --------->ANAC58                            --------->ANAC46                           ------->MYC2                           <-------PIF5                           ------->MYC3                           ------->PIF5                           <-------PIF4                           ------->PIF4                                            --------->GLK1(1)                           <-------MYC3  --------->ZAT18                          <---------GLK1(2)                           <-------MYC2  <---------ZAT18                          --------->ARR14(2)               ============================bZIP_DOF                               <---------ARR14(2)         <----------DOF2  <---------ATERF1(1)                                  --------->TOE1(1)         ==================================bZIP_DOF                           ------>ZmHOX2a(1)         =======================================bZIP_DOF                      <---------LBD16   <----        <---------ANAC58  --------->ANAC58                                    --------->LBD16   <----        <---------ANAC58  --------->ANAC58                                 ------>ZmHOX2a(1)    ----- ---NtERF2     =================================bZIP_DOF                  <---------ALFIN1 ========== --->RAP2.6(2) <----------DOF2--------->ATERF1(1) ------>ZmHOX2a(1)     <---------ATERF1(1)------>ZmHOX2a(1)   ccctacaatggctttgcctttgtctggcacgcgccacctcacgcgcgctctcctctctaatgtcactcttatggctcctcctcggattccttcctctgtt  14169900                  <------MYB46(1)                  <------MYB83                 --------->MYB46(2)          ------>ZmHOX2a(2)         <---------GLK1(1)        <---------ARR14(2)        <---------ARR11(3)        --------->ARR11(3)        <---------AGP1        --------->ARR14(2)       <-----------ARR10              <-----------RAV1(2)       <---------CCA1(2)         --------->ARR14(2)           <-----------HVH21      <---------MYB46(3) ----------->HVH21                -------->P     --------->ALFIN1<---------MYB46(3)                  --------->MYB52(1) <---------ZAT14 --------->MYB59<---------MYB52(1)      ----------->HVH21 --------->ZAT14 <---------AtMYB61                     <---------MYB52(2)          ------>NtERF2 -----ZAT18      --------->MYB111(1)                   <---------MYB59             --------->At4g35610 -----ZAT14    <---------MYB52(1)<---------ARR14(2)   <---------At4g35610         --------->DEAR3(1) ---->ZAT14   <-------GAMYB    --------->LBD16        --------->At4g35610      --------->ANAC46 ================HOX2a_HOX2a <---------LBD16      --------->ALFIN1  --------->ARR14(2)   --------->ZAT6   cactacggtggatctcggttaggttgttcgacccggttcttctcaattcgatgtggagctaaccggtcaggttctacttactcgccgcttaactctggct  14170000                                                                 <---------ANAC46                  <-                  --------->DEAR3(1)                   <---------YAB1                     <------NtERF2                <---------ATERF1(1)                  --------->YAB1     <---------YAB1   --------->LBD16           ------>ZmHOX2a(2)               --------->LBD16<---------ZAT14               <---------ANAC58          --------->At4g35610             <---------LBD16 --------->ZAT18  <---------TOE1(3)      ---          <---------At4g35610             --------->HSFB2a(2)    <---------ANAC58       <---------ANAC58       <---------ZAT6                     <---------HSFB2a(2)    <---------ANAC58       <---------ANAC46  <----------DOF2 ----------->HVH21      <---------LBD16  --------->ZAT14  <---------TOE2(3)  <------  --------->TOE2(3)------>NtERF2  <----------DOF2   --------->ICU4   <---------YAB1----------->RAV1(2)   ctaactttagtgatcggcctccgacggagatggctcctttgtttccgggatgcgattatgagcactggcttattgttatggataaacctggcggggaagg  14170100                      <---------MYB46(3)                     <---------WOX13(1)                   --------->ATHB12                 <---------WOX13(1)               --------->ATHB12          <-----------RAV1(2)         <---------At4g35610         --------->At4g35610        ----------->RAV1(1)                             ----------->GT1      --------->At4g35610<-----------GT1                <------MYB83             <---------YAB1 -----NtERF2  <---------YAB1                            <------MYB46(1) --------->AHL20(2)     <----- --->NtERF2 <---------At4g35610                 <---------MYB46(3)    <---------GLK1(2)      <------- ---DEAR3(1)--------->At4g35610            ---------->DOF2 <---------KAN4(2)   --------->TOE2(3)  <--   cgcgactaagcagcagatgattgattgttacattcaaaccctagcgaaagtcgttggaaggtataatcttcagattatatatgttaattgtctaggttgc  14170200  Previous    Next  AGI:  At2g33420.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25800.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20010.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71451.1); similar to hypothetical protein LOC_Os03g04560 [Oryza sativa (japonica cultivar-group)] (GB:ABF93881.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63332.1); contains InterPro domain Munc13 homology 2 (InterPro:IPR014772); contains InterPro domain Protein of unknown function DUF810 (InterPro:IPR008528); contains InterPro domain Munc13 homology 1 (InterPro: Range:  from: 14165781    to: 14169603    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g33430.1    Description:  plastid developmental protein DAG, putative. similar to plastid developmental protein DAG, putative [Arabidopsis thaliana] (TAIR:AT2G35240.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67991.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71448.1) Range:  from: 14169743    to: 14172118    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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