Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <----------DOF2                    ----------->RAV1(1)  <---------AHL20(2)       <-----------------AGL1 -------AHL20(2)       <---------ANAC58----------->HVH21                    <----------DOF2 ------AHL20(1)        <---------ANAC58--------->DREB2C(2)     <---------ICU4 ----->AHL20(1)        --------->ANAC55(2)                    <---------MYB52(1) ----AHL20(1)          <---------ANAC55(2)       ---------->DOF2     <----------DOF2   --------->ANAC46 --->AHL20(1) --------->TOE2(3)       --------->DEAR3(2)   <---------YAB1<-----------GT1        -----   atattttctttcaatacattagatttcgtaaccattttggaccgacagaagaaaagagattaccattatgtcttttttcttttctatatacgataactaa  14165400                                                                               <---------------AGL15<                                                                         --------->ARR11(3)        --                                                                         <---------ARR11(3)       <--                                                                         --------->AHL20(1)       ---                                                                        --------->AHL20(2)      -----                         ----------->GT1                          <---------TOE2(3)             <----   ---------->DOF2      ----------->GT1                          ---------->DOF2      ----------->GT1 ----->DOF2        <---------ANAC46                           --------->TOE2(3)======================   aagtctaaagcgtatttctcttcgtataggtaaaaatgtagattgagacattgagtagcatctacattaaagaaatatatacaaaaactggtatattgtg  14165500         <---------------AtSPL8      --------->GLK1(2)    --------->MYB46(3)              --------->At4g35610 ------NtERF2                   <-----------GT1 ---->NtERF2                --------->ARR11(3)    ----------->GT1       <------ZmHOX2a(1) -------ATERF1(2)           <---------ARR11(3) <---------AtLEC2 --------->ANAC46                   <- ------>ATERF1(2)       ---------->DOF2    --------->CCA1(2)   <---------------AGL15              <-- ---->At4g35610       <---------AHL20(2)----------->ARR10      --------------->AGL15             <--- -----At4g35610   --------->AHL20(2)<---------At4g35610     <-----------GT1                    <----- ==============================================================================MADS_MADS  <---------ZAT6   ctggcaacaatctagtacatatatataaaagattttacagatgagatttggatggacaaaatttactcgaaataggaaattagctaattctagtgttatt  14165600                            <---------ARR14(2)                            --------->ARR14(2)                         --------->ANAC58                         --------->ANAC46             <---------RVE1(1)                             - --------AHL20(2)        --------->ANAC58            <---------GLK1(2)     <---------DAG2        ---- -------YAB1         <-----------GT1  <---------GLK1(2) <---------AHL20(2) <----------DOF2 <------NtERF2 ------AHL20(2)------>ZmHOX2a(1)    <---------YAB1   <---------ARR11(3)   <---------DAG2  ------>NtERF2 ----YAB1     <---------MYB59   ------>ZmHOX2a(1)    --------->ARR11(3)<-----------GT1  ---------->ID1   tttatttgtgagtattcctaattttactcgcatcctctatgattctctcaatacagattttttttgctgtagattacctttttccaacttgtcgccttcc  14165700                                             --------->YAB1             <---------GLK1(2)         ---------->ID1         ------>ZmHOX2a(1)         <---------MYB52(1)     --------->AtMYB61           <---------ANAC58                      <----------DOF2     <---------ALFIN1            <---------ANAC58          --------->CCA1(2)       ------>ZmHOX2a(1)  <---------ALFIN1              <---------TOE2(3)         <---------ARR11(3)  <----------DOF2 ----->ZmHOX2a(1)              <-----------GT1    --------->ZAT6 <----------DOF2 *TSS -->ZmHOX2a(1)             <---------YAB1   <---------YAB1--------->ARR11(3)------>ZmHOX2a(1)   -----   tcctccacctcctcagtttctccagttttatttttacgtttgtcttataataacacaagagatatgtcttttcctttcctctttcctctctcattgagca  14165800                                                               --------->YAB1                                                           --------->MYB46(3)                                                       ----------->HVH21                                                   --------->LBD16                                                   ------>NtERF2                                                  --------->ANAC58                    --------->DAG2                --------->DEAR3(1)                   ---------->DOF2                --------->ANAC46                  <---------MYB52(1)              --------->ANAC58                 --------->LBD16                ------>ZmHOX2a(1)                       --------->ARR14(2)                --------->ANAC55(2)             <---------ATERF1(1)   --------->LBD16   <---------ARR14(2)                <---------ANAC55(2)            <---------ALFIN1<---------ICU4           <---------MYB52(1)         --------->AHL20(2)  <----------DOF2<---------ALFIN1  <---------ATHB12   ------>ZmHOX2a(1) ---->WOX13(1) <---------LBD16   <---------ALFIN1<---------LBD16    <---------LBD16    <-------GAMYB   atctaatttcataaaatcccgtaaagttttcctttccaccctctcccctcctccgccatgacccatcatcaccggagagagtccttctcggttactccct  14165900                <---------ANAC58                <---------ANAC58               <---------MYB52(1)             <---------ANAC58             <---------ANAC46             <---------ANAC58          <---------ARR14(2)          --------->ARR14(2)          --------->GLK1(2)          <-----------------AGL1                                  <-------        <------MYB46(1)  ---------->ID1   <----------DOF2                                 -----------        <---------MYB46(3)          ------>MYB83                                 --------->ARR11(3)        <------MYB83 <----------DOF2------>MYB46(1)                              <---------ARR11(3)        <---------HSFC1(2)        <---------MYB59                         ------>ZmHOX2a(2) ---------        <---------HSFB2a(1)       <---------MYB46(2)                 <----------DOF2   <XXXXXXXXXXXXX        --------->HSFC1(2)       --------->DEAR3(2)                 <---------ANAC58  <---------ANAC58        --------->HSFB2a(1) ------>ZmHOX2a(1)                       <---------ANAC58  <---------ANAC58   ctaccatgggaggttccgtcgtgctttgtcctaataccgaccttctttggccatttgggaagcttgaagggcttgatcgagatgatattcgtgagacggc  14166000                                                    --------->ZAT14                                                    <---------At4g35610                                                    <---------ZAT14                                                    --------->At4g35610                  <----------DOF2              <------MYB83                 <---------ANAC58            <--------P   <---------TOE1(2)    --------->ARR11(3)                     --------->MYB55(2)            ------->GAMYB    <---------ARR11(3)                     <---------MYB46(3)           --------->MYB46(3) --RAP2.6(2)  --------->ANAC46            <---------AtMYB61--------->ANAC55(2)       --------->YAB1 >HVH21      <---------LBD16           <---------AtMYB61----------->HVH21--------->TOE2(3) <---------ICU4 >RAP2.6(3)<---------REM1(2)   <---------LBD16 <------MYB46(1)  <-----------GT1--------->YAB1 XXXXXXXMIR844*  <---------ANAC58--------->LBD16<------ZmHOX2a(1) --------->ZAT6    <---------ATHB12   ttatgaaatcttcttcacggcttgccggtcttcaccgggttttggtggtaggactgctctcacgttttactctaaccacaatagcaatgaccatcatgga  14166100                    <-----------RAV1(1)                   ------>ZmHOX2a(2)                  <------ZmHOX2a(2)                 --------->ARR14(2)                 <---------AGP1                 --------->GLK1(2)                 <---------ARR11(3)                 <---------ARR14(2)                 --------->ARR11(3)                <------ZmHOX2a(1)                                                                ----          <------ZmHOX2a(1)        <-----------RAV1(1)                                    --------->ANAC46          ================HOX2a_HOX2a   <---------ANAC46                    ----------->HVH21  ------          ===============HOX2a_HOX2a    <------MYB46(1)                   <---------MYB46(3)  -------       ===================HOX2a_HOX2a   <---------ANAC58                 --------->ALFIN1 --------->ANAC58       <------ZmHOX2a(1)           --------->ALFIN1               ---------->DOF2       ---------->DOF2       ==================HOX2a_HOX2a    <---------ANAC58         <------ZmHOX2a(1)     <---------REM1(2)     --------->ALFIN1    <------NtERF2  <------MYB83       <---------HSFB2a(2) --------->bZIP60(1)    ======================HOX2a_HOX2a  --------->MYB59     --------->HSFB2a(2) <---------bZIP60(1)    <------ZmHOX2a(1)   <---------MYB46(3)            <----------DOF2    <---------DEAR3(1) <--------    =====================HOX2a_HOX2a   <---------MYB46(3) <---------LBD16<---------AtMYB61--------->ANAC58   gacggaggaggaggaataggatctggtggctcaactggtgttgggtctgggtttggctcttctgggaggaaagaggtggtgacgacccctacaagccggg  14166200                                                                            --------->RRTF1(2)                                                                            --------->RAP2.3(3)                                                                            --------->RAP2.3(2)                                                                            --------->ANAC46                                                                            --------->RAP2.6(2)                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                           --------->RRTF1(1)                                                                           --------->RAP2.3(1)                                                                           --------->ATERF1(1)                                                                           <------NtERF2                                                                          <---------ATERF1(1)                                                                          --------->At4g35610                                                                         <---------ARR14(2)                                                                 --------->At4g35610                                                               <---------DEAR3(1)                                                               <---------RAP2.6(2)                                                              <---------At4g35610                                                              --------->At4g35610       --------->ARR14(2)                                                      --------->ANAC58   --------->ARR14(2)      <--- ------->HVH21                                        --------->ANAC58  <------ZmHOX2a(1)       <---- ----->GT1                                            --------->ANAC46  --------->ATERF1(1)   ------- -->LBD16 <---------TOE2(3)                    <---------KAN4(2) --------->ZAT2    --------->ZAT14 <- -LBD16<----------DOF2                 --------->REM1(2)    <------ZmHOX2a(1)--------->LBD16---------   tgaaacgggctttaggtttgaagatgcttaaacggtctccgtctaggcgaatgtccacgataggagcggctggaggagccgcaacttcactatcccctgg  14166300  Previous    Next  AGI:  At2g33420.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25800.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20010.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71451.1); similar to hypothetical protein LOC_Os03g04560 [Oryza sativa (japonica cultivar-group)] (GB:ABF93881.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63332.1); contains InterPro domain Munc13 homology 2 (InterPro:IPR014772); contains InterPro domain Protein of unknown function DUF810 (InterPro:IPR008528); contains InterPro domain Munc13 homology 1 (InterPro: Range:  from: 14165781    to: 14169603    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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