Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->CCA1(2)                  <----------DOF2         <------ZmHOX2a(2) ---------ZAT2                              <---------DAG2         --------->ARR14(2) ---------At4g35610                   <---------DAG2          <---------DOF5.7(2) -------->ZAT2 <---------CCA1(2)      <----------DOF2       --------->DOF5.7(2)                     < ---------->RAV1(2)              ------>ZmHOX2a(1)    <-----------GT1                  <---------HSFB2a(1) -------->At4g35610             --------->TOE1(3)<----------DOF2   <---------ARR14(2)  --------->GLK1(1) ---------RAV1(2)       --------->GLK1(1)  <---------DAG2---------->ID1                <---------GLK1(1)   tcagctgagagaaacgcgtctctcagatttcaatccttcactttcccttttctttttttctcgttatcggatcagaacaaaattttgggaaattcgaggt  14158300                                                   --------------------->WRI1             --------->ARR14(2)                    <---------ANAC58             <---------ARR14(2)                    <---------ANAC46       <---------MYB46(3)                          <---------ANAC58  --------->LBD16                              <-------GAMYB <---------LBD16      <---------YAB1          <---------MYB46(3)                          <---------HSFB2a(2) --------->LBD16   <---------ATHB51           --------->MYB52(2)                        ------>ZmHOX2a(1) ---------LBD16    <---------YAB1   --------->CCA1(2)  <---------ZAT6       <---------YAB1--------->HSFB2a(2)   ttccctggattgttggattcgattattgttgaaattcgatatgggtgtttgttgtttgtgttaatcgttgtcaaagttttgatttttttcctcgagaaaa  14158400                                                                                                    <                                                                                                  ---                                                                                                <----                                                                                              ------>ZmHOX2a(1)            <---------MYB52(1)                              <----------DOF2                   =======          <---------ANAC58                          --------->ANAC58                      <---------ARR14(2)          <---------ANAC58          ------>NtERF2   --------->ANAC58                      --------->ARR14(2)        <-----------GT1            --------->RAP2.3(3)   --------->ICU4                  <---------CCA1(2)    <---------CCA1(1)           --------->ANAC58--------->ANAC55(2)                    <---------ANAC58    <---------RVE1(1)           --------->ANAC58<---------ANAC55(2)                    <---------ANAC55(2)   --------->ARR11(3)           --------->ANAC46--------->ANAC58                       --------->ANAC55(2)   <---------ARR11(3)        --------->ARR14(2) --------->ANAC58                       <---------ANAC46   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <-----------GT1  <---------DAG2             <---------ANAC58 <---------TOE2(3)           <---------ARR14(2) --------->ANAC46 <-----------GT1 <---------YAB1 -----   tttgagattttttcgttcgtctaatcgagagaaaacgcagccattttactacgtaagtaatgctttttctcatttccagttttctgatttcgtatcctga  14158500           ------>ZmHOX2a(2)       <---------YAB1        <---------AHL20(1)     --------->YAB1          --------->AHL20(2)                       <---------MYB46(3)    <-------TEIL       <----------DOF2                           <---------TOE2(3) ---------YAB1     --------->WRKY38(1)                           <---------TOE1(3)   <-----------GT1 --->ZmHOX2a(2)    --------->WRKY12                  <---------GLK1(2)--------->MYB52(2) <----------DOF2 -----ARR11(3)     --------->WRKY45                  --------->ARR11(3)           <---------ICU4 =================HOX2a_HOX2a--------->AHL20(1)      <---------ARR14(2)        --------->YAB1 ---->ARR11(3)    --------->DOF5.7(2)   <-----------GT1    <---------YAB1     <-------TEIL   tcttgattcatgatccaagcgttgactttgatatattagaattcacaaattttcagattttgtgattagggtttgttagattcatatttatcttttgttt  14158600                                                                                                 ----                    <---------LBD16               <---------MYB46(3)   <---------YAB1      <------MYB46(1)       <------ZmHOX2a(2)                  <---------TOE2(3)<---------ZAT2   --------->YAB1 <------MYB83     <------ZmHOX2a(1)--------->LBD16 <------------CBF *TSS--------->At4g35610            --------->MYB59  --------->YAB1    ----------->RAV1(2)   <---------TOE1(3)<---------At4g35610 <-----------RAV1(2)   tgtatcaggatcaaattcaaacccctgaatactgaagcgaaattgaggttaatggttagggagcttagggtttatgaatgatcaggtggtatttggtatt  14158700                                                                                                <----                                                                                             --------                                                                                             <-------                                                                                           --------->CCA1(2)                                                                                          --------->ARR11(1)                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                --------->ARR14(1)                                   XXXXXXXXXXXXXXXXXXXXX>MIR830*                --------->CCA1(2)                             <---------CCA1(2)                                 --------->ARR14(2) <--                        <---------ARR11(3)                                     --------->ARR11(3) <--                        --------->ARR11(3)       <---------TOE1(3)             <---------ARR14(2) <--                       --------->GLK1(1)         <---------TOE2(3)             <---------ARR11(3) <-- ------->HVH21         <---------GLK1(1) <---------GLK1(2)                     --------->ARR11(1)----   tgacatgaattagggaacacgagtgatatctctatcttctccagattgtttaagcttggggtttagtttccatagattgaagatttgctatggatacggg  14158800          ---------->DOF2                                                            <------ZmHOX2a(1)       ----------->GT1                                                             <---------TOE2(3) -------HVH21                                                                  <----------DOF2 ->ANAC55(2)                                                                <---------ARR11(1) --ANAC55(2)                                                                --------->ARR11(3) -------ANAC58                                                          ====================HOX2a_HOX2a -------MYB46(3)                                  --------->AHL20(2)    <------ZmHOX2a(2) -------ANAC58                     <---------TOE2(3)      ----------->GT1  <---------CCA1(2) -------ANAC46          ------->TEIL              <---------AHL20(2)   --------->ARR11(3)   --------- ----->ALFIN1      --------->MYB52(1)       <---------MYB52(1)         <---------ARR11(3)>>>>>>>>>TBF1   tcgtggagagggtaaagaagctaatggatgtgagaataaggctatagttagtttaaatagcagtgaaattgaagatcaaatctttgaggaagaagaaagt  14158900                                <---------ANAC58                                <---------ANAC58                      <---------ANAC46                     --------->ANAC58 --------->HSFB2a(2)           <---------ZAT14                     --------->ANAC46 <---------HSFB2a(2)     <------ZmHOX2a(1)                 ------>NtERF2 <------NtERF2        --------->ICU4  --------->ZAT14      --------->ICU4 --------->ANAC58 <---------HSFC1(1)     --------->ZAT18                  ------- ->DOF2  <---------YAB1 ---------->DOF2        ----------->HVH21  <---------ZAT14   ---------->DOF2   gagtcacaatgtttattgcctccaaggaaaggaggcatgtctagaagcactgacaagattaagaggactgtgcagtggaatgacattaaaggagacaatc  14159000                                     ------>ZmHOX2a(1)                                    --------->TOE1(3)                                    <---------GLK1(2)                                    --------->TOE2(3)                                  <---------YAB1                              <---------ARR11(3)                                     <---------ANAC58                              --------->ARR11(3)                                     <---------ANAC46                        ----------->GT1                       <---------YAB1         ----------->GT1   <---------TOE1(3)   <---------TOE2(3)              --------->ZAT14                <---------ANAC58   <---------TOE2(3)--------->MYB46(3)      --------->ZAT6----------->GT1            --------->YAB1 -->GLK1(2)        ------->TEIL   <---------YAB1      <---------ZAT14           <----------DOF2     <   ttgctgaggttttagtttatgaaccaaggtaatatcatccttaacaacactatctctgtagagtattatttcaagtttttcgctgtatcgtgattctctt  14159100                                                        <---------ARR14(2)                                                        --------->ARR14(2)                                                     <---------ANAC58                                                     <---------ANAC55(2)                                  --------->ATHB12   <---------ANAC58  <---------MYB52(1)                                  <---------ICU4     --------->ANAC55(2) --------->MYB52(2)       <--                                 --------->ICU4     <-------TEIL --------->TOE2(3)            -------        <------MYB46(1)          <---------YAB1--------->LBD16   --------->TOE1(3)           <-------        <------MYB83            <---------TOE2(3) <---------ARR14(2)   <--------P            <-------  <---------AHL20(2)        --------->TOE2(3)<---------LBD16  --------->GLK1(1)              -------- ----------DOF2<---------ARR11(3)<---------ATHB12 --------->ARR14(2)<---------TOE2(3)        <-------   ctcttttatttggtctagctcttacttaaatgttaatgatttgcaaatgcgggattcgtatcggaaaccttaggttagttttgttttggctatttccgtg  14159200  Previous    Next  AGI:  At2g33390.1    Description:  unknown protein Range:  from: 14158655    to: 14159820    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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