Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->O2                                                      <---------O2                        --------->ZAT14                                                   --------->ETT(2)                 <---------ARR14(2)                                                   <---------DEAR3(1)               --------->ARR14(2)                                                   <---------ETT(2)              --------->ANAC46                                            --------->MYB46(3)                 <------ZmHOX2a(2)                        <-----------GT1    --------->ANAC58         <-----------------AGL3<---------ZAT14                      <-----------HVH21    --------->ANAC58     --------->AtLEC2------>ZmHOX2a(2)                ------>ZmHOX2a(1)          --------->ANAC46  <-------TEIL     --------->ARR14(2)         <---------GLK1(1)      <---------ANAC46   --------->DEAR3(1)         <---------ARR14(2)<----   agtgtaacttgaaatctccttcaatgtcactgctccttgtgtctcaagcaacgtcgacgtcgatacatgcacaatatttggatccgaaaccgagtactgc  14156400                                                                     ---------->DOF2                                                                 <---------AHL20(2)                 <---------AHL20(2)                              --------->AHL20(2)             <---------AHL20(2)                                <---------YAB1            --------->AHL20(1)                              --------->ICU4                  ---------       --------->YAB1                <---------AHL20(2)  <---------YAB1    --------->ANAC58 <--------      <---------ATHB12        --------->ZAT18    ---------->DOF2--------->AHL20(2)  --------->AHL20(2) -----AtLEC2<---------AHL20(1)<---------ZAT18 --------->YAB1<---------YAB1 --------->ANAC58--------->TOE2(3)   atgtccaaatcatatatatttcattttgtaagagcacatataatcgaataagaaagaagattattattaaaaaaaggaagccccaaaaatataccttgat  14156500                                                       <---------ZAT14                ------>MYB46(1)                        --------->ZAT14                ------>MYB83--------->ICU4         <-----------GT1           --------->TOE1(3) ------>AGL15 <---------MYB59          --------->TOE2(3)<---------ALFIN1     --------->TOE2(3) -------AGL15--------->MYB46(3)    ------>ZmHOX2a(2)   <---------At4g35610   <---------DAG2   atggtattcaatcgaaccaaactcatggaaatgttgatcgacctcaataggtttttcagcactgccatggattcaataaccttatgttataatgtctcac  14156600                                                                                                  ---                                                                                              <------                                                           --------->YAB1                  <---------WOX13(1)                                                         -------->P                   <---------ICU4                                                        <-----------GT1               --------->YAB1              ------->TEIL                       <---------ICU4                     --------->ARR11(3)         --------->CCA1(2)                      --------->ICU4                      --------->GLK1(2)        --------->ARR14(2)                     <---------TOE2(3)         <---------ICU4 <---------YAB1        <---------ARR14(2)                   <---------AHL20(2)        <---------ARR11(3)--------->ATHB12   attggcattggatatgaacttattgccaattgatttttagttggaaattaatgtttactaaccatactaacaaaatcatttcaaataatcttgattgaag  14156700                     --------->SPL7                     <-------TEIL                  <------MYB46(1)                 --------->MYB46(2)                 --------->MYB59                 --------->MYB52(2)         --------->AHL20(1)                                                              <---------ARR11(3)         <---------AHL20(1)                                                              --------->ARR11(3)         --------->ARR11(3)   <---------At4g35610                                       <---------CCA1(2)     <------NtERF2<------MYB83--------->At4g35610                                    <---------MYB52(1)    --------->LBD16  <---------LBD16                                             -------->P    ----------->GT1<---------SPL7                                                --------->MYB52(1)   --------->RAP2.6(2)      <--------P                                         <---------SPL7       -  <---------LBD16--------->MYB111(1)  --------->LBD16                         <---------ANAC58    <-- ------->DOF2   <---------MYB55(1)   <---------LBD16                     --------->ALFIN1<---------ARR14(2) ---TOE2(3)    <---------MYB52(1)   <---------LBD16            ---------->DOF2<---------ANAC58   <---   ttaagccggaaaatattgttaggtacggaggtagctaaaccgggaatgaaattggaccagagaataaaagagagagtgtggcttaccggtatatcttgag  14156800                                                                                   <---------YAB1                                                                                  <---------AHL20(2)                                                                                  <---------AHL20(1)                                                                                  --------->AHL20(1)                                                                                  --------->AHL20(2)                                                                                 --------->YAB1                                                                                 <---------ICU4                                                                                --------->ICU4                                                                                <---------YAB1                                                                              <--------ATHB1                                                                              --------->YAB1                                                                              <--------HAHB4                                                                              <---------ICU4                                                                              --------->ATHB51                                  --------->CCA1(2)                          <---------ATHB51                                  <---------GLK1(1)                          --------->ICU4                                  --------->GLK1(1)                      <-------TEIL                                 --------->ARR11(3)                    --------->ZAT18                                 <---------ARR11(3)                  <---------------AtSPL8                                 --------->ARR14(2)        --------->ANAC58  <---------ATHB12           <---------TOE2(3)     <---------ARR14(2)        --------->ANAC58  --------->AHL20(2)     - -------->ALFIN1              <---------HSFB2a(2)      --------->TOE1(1) ------------>CBF------------ -------ANAC46                --------->HSFB2a(2)     <---------LBD16--------------->AtSPL8       --- ---ZmHOX2a(1)            <----------DOF2         <---------ALFIN1  <---------ANAC46    <-----------GT1   gagtgtttctttcaacgttggagaggctctttcgagatatgccattcttgaaacacctcggaagaaacttgagggtacaataattataatttacaatgtc  14156900                                                                      <---------ANAC58                                                                      <---------ANAC58                                  <---------ARR11(3)                  <---------ANAC46                                  --------->ARR11(3)         <---------DAG2                       <------------CBF                      <----------DOF2                      <---------AtLEC2                   <---------ZAT14                 <---------MYB46(3)          <----------DOF2        <---------CCA1(2)       --------->ZAT18             --------->ATHB12 -------->WOX13(1)   <---------ZAT14                     --------->ZAT14      ----------->GT1    ---- >CBF     <---------DAG2  <---------ZAT18            <---------ICU4<----------DOF2 <------------CBF --------->CBF       --------->ZAT18    <-----------HVH21<---------ZAT18   <------------CBF      <---   atcaatctataactttttatgtgtgcattgcacatatatctgtgtgagagcctaataagtgcgctttttctttcgtgcattggtgaattgttggatgttg  14157000                                 <-----------GT1                                 --------->ANAC58                            --------->AHL20(2)                                   ----------->GT1                            <---------AHL20(2)                                   --------->ANAC46                        <---------ICU4                                           --------->ANAC58                        <--------HAHB4                                           <---------ANAC55(2)                        --------->YAB1                              <---------At4g35610            --                       <---------ATHB12                            <---------ARR14(2)            ----                     --------->WOX13(1)                            --------->ARR14(2)    ------->MYC3     <-----------HVH21 --------->ICU4   <----------DOF2            ------->TEIL  --------->ANAC55(1) ------->GT1--------->AHL20(2)  <-----------GT1                   <---------CCA1(2)      <-------MYC3 ------ANAC46      ------------>CBF <----------DOF2           <------------CBF   --------->ANAC55(2)   agtaaaatgtcagtttaaatttgcaatcatttttttatctttctttctaagaaaacattttagctattgtatctgccactgaaacgtaacatgtggatgt  14157100                                                                                           <---------ARR14(2)                                                                                           <---------GLK1(2)                                                                              ------>ZmHOX2a(2)   ---                                                                             <------ZmHOX2a(2)    ---                                                                            --------->ARR14(2)   <---     <---------At4g35610                                                    <---------ARR14(2)   ----     --------->At4g35610                                                   <---------PCF2  --------->ARR14(2) <-----------HVH21              ---------->DOF2                         --------->ALFIN1<------NtERF2 ------->TOE1(2)           <---------MYB52(1)                         --------->ALFIN1 ------>NtERF2< --->TEIL                 <-------GAMYB        <----------DOF2   ---------->DOF2      <---------DEAR3(1)   acctgtgagccgaatataaacataggcccgttgataaagagttttaatgctttctcagccttcggactaaagctgtgggatccgatggacgccgattcgc  14157200         --------->bZIP60(1)         <---------bZIP60(1)         ----------->HVH21       --------->REM1(2)     --------->LBD16    --------->ANAC55(2)    <---------ANAC55(2)    --------->O2    <---------ANAC46    <---------O2 --------->PCF5 ------>ANAC58                                                                                  <---- ------>ANAC58                                                                                  <---- ------TOE1(2)                                                                                  ----- ----->SPL7              ----------->HVH21                                           --------->AtLEC2 -----------HVH21   <XXXXXXXXXXXXXXXXXXXXXMIR4221                         --------->RVE1(1)   -------   acggtcccgtgatgacacagaaggaatttgacagaggtagaatgtgttttttccaaaaacttagattacatctaaaatatcgaaaccatggaaaatgaga  14157300  Previous    Next  AGI:  At2g33385.1    Description:  ARPC2B (actin-related protein C2B); structural molecule. similar to ARPC2A/DIS2 (DISTORTED TRICHOMES 2), structural molecule [Arabidopsis thaliana] (TAIR:AT1G30825.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71459.1); contains InterPro domain Arp2/3 complex, 34kDa subunit p34-Arc; (InterPro:IPR007188) Range:  from: 14154579    to: 14156845    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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