Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->ZAT2                                                <---------ZAT2                                                <---------At4g35610                                                --------->At4g35610                                           <---------LBD16                                         ------->TEIL                                         <---------ARR14(2)                                       <--                                         --------->ARR14(2)                               <---------MYB52(1)          --------->YAB1                <---------CCA1(2)                                --------->TOE2(3)  <----------DOF2               <---------ARR14(2)                                     ------->TEIL - -----ICU4<---------ANAC58      --------->ARR14(2)                          <-----------GT1   <------ >ZAT6    <---------ANAC58      <---------GLK1(2)                  --------->O2    <---------------AtSPL3   attcctttgctatcgtgaccttctgttccattcggatgctctgtatctggagctgctaatgctcttgccatgtctgtttttcatttttgtacgttagatt  14153100                                                                                 --------->ANAC55(1)                                                                                 --------->ANAC46       --------------->AGL15                                                  <---------ZAT18       <----------DOF2                                                        <-------TEIL       <---------------AGL15                                                  --------->ZAT18    ------->TEIL                                                          --------------->AtSPL8   <---------CCA1(2)                                                      --------------->AtSPL3 <---------ANAC55(2)                                                      <---------------AtSPL8 --------->ANAC55(2)                           <---------ANAC58   --------->ARR14(2) -------YAB1                                   <---------ANAC46   <---------ARR14(2) -------------->AtSPL8          <----------DOF2<---------ANAC58   --------->ARR11(3) ---GLK1(2)          <-----------GT1  --------->ARR11(3)  --------->ZAT6---------->DOF2           <--   attatgtatctttttcaagaaaattacattttttctttaagttattgtgacttgtgttgaacactacaaatcttgaaaggtacacttaatttgaaacatg  14153200                                                                                                <----                                                                                    --------->ARR14(2)                                                                                 --------->ANAC46                                                                                 <---------ANAC55(2)                                                                                 --------->ANAC55(2)                                                                                <---------TOE1(3) <--                                                                                <---------TOE2(3)>>>>      ------>ZmHOX2a(1)   ----------->GT1     ----------->GT1                  <-----------GT1 <----- -----TEIL      <----------DOF2   <-----------GT1                        <-------TEIL --------->MYB46(3)   ttcatgtcctcaccataacttttaaaaatggataatatacgatttgtcatgttaatagttggatgtttttgtagtttcatttaacgtaaccacttaattt  14153300                                                                                         ------>NtERF2                                                                                        ----------->HVH21                                                                                        --------->WRKY38(1)                                                                                        --------->WRKY12                                                                                      <---------At4g35610                                                                                 ====================                                                                                 <----------DOF2                                                                             --------->LBD16                                                                            <---------ANAC46                                                                            <---------ANAC58      <-----------GT1                                                       <---------ANAC58  <------   <---------MYB46(3)                                                       --------->ANAC55(2)     - -------GT1           --------->AHL20(2)                                    <---------ANAC55(2)------ -------LBD16      --------->YAB1                                     <---------ATHB12--------->At4g35610 >>>>>>E2Fb   <---------AHL20(2)                                ------>ZmHOX2a(1)<---------DAG2------ ------GT1    --------->AHL20(2)                         --------->ICU4    --------------->AtSPL3 <--   cccgcttgttacacattaaaatcataaatttggacattcacacttacatggttttggtaatgtttcctccaaatcgttccgtacttttcgctgactggtg  14153400                 <---------TGA1a                 --------->TGA1a                 <---------O2                 ==================bZIP_DOF                 --------->O2                <------NtERF2               <-----------HVH21               ------>NtERF2              --------->DEAR3(1)              <---------ANAC58              <---------bZIP60(1)              --------->bZIP60(1)              <---------ANAC46             <-----------------------TaNAC69(2)             --------->ATERF1(1)             <------NtERF2            ------>NtERF2            <---------ZAT18      <---------DOF5.7(2)                                                                        <---      --------->MYB52(1)                                                                         ----     ----------->HVH21                                                                           ----    <---------MYB52(2)                                                                           ----   <---------At4g35610                                                                           <---   --------->ZAT2<---------ANAC46                                                               <----   --------->At4g35610  ---------->DOF2                                                       ------- ==========================bZIP_DOF      ------>ZmHOX2a(1)                                ----------- -----HVH21 <---------ATERF1(1)        ----------->RAV1(2)                               --------->ICU4 -------->LBD16<---------RAP2.6(3)     <---------At4g35610                      <---------ANAC46<---- --->WRKY38(1)<---------ANAC58         --------->At4g35610                      <---------ANAC58----- ----->HVH21--------->ABI4(2) --------->At4g35610                 <-----------GT1 <---------ANAC46 <- -------LBD16--------->RAP2.3(1) ------>NtERF2                 <----------DOF2  <---------ANAC58<----   accggagctaacggtgccgtcgtggccaaagcctctgcctctcctgccattctctctctcttactcttttacaatctcgctgtcttgtgtaattgttaat  14153500 --------->YAB1 ------ICU4 ----->ATHB51 ----->ATHB12                                                     <----------DOF2 ---->HAHB4                                                       ------>ZmHOX2a(1) -----ATHB1                                                      --------------->AGL15 -----AHL20(2)                                                   --------->TOE2(3) -->YAB1                                                         <---------------AGL15 >GT1                                          *TSS             ------>ZmHOX2a(2) -----YAB1                           <-------TEIL  <---------AtMYB61                            ----- ---->ICU4                       --------------->AtSPL3   <---------ANAC58                      <---- --------WOX13(1)                <---------------AtSPL8   <---------ANAC58                     <----- -----ATHB51                 ---------->DOF2 <---------TOE2(3)<---------ARR11(3)           --------->YAB1   aattgataatgctctctgtttcttcttatgcaaaagacgtacacattgatgttttggtgttcgtgatcctttataagtaaaacgatataacaaggatgat  14153600                  <------ZmHOX2a(1)                >>>>>>>GRF7               <-----------RAV1(2)             <-----------HVH21                                                                 ------           <-------MYC4                                                                      ------->PIF5           ------->MYC4                                                                      <-------MYC4           -------->ABF1                                                                     <-------PIF5           ------->MYC3                                                                      ------->MYC4           ------->MYC2                                                                      <-------MYC3           <-------MYC3                                                                      ------->MYC3          --------->ANAC55(2)                                                                ------->MYC2          <---------ANAC55(2)                                                               ---------          =========================================bZIP_DOF                                 ---------          <---------TGA1a                                                                   <--------          <--------ABF1                 ---------->DOF2                                     ---------          --------->O2      <---------ANAC46                       --------->YAB1           <--------          <---------O2      ----------->GT1                       <---------YAB1            <--------          --------->TGA1a   <---------ZAT6                 --------->ANAC46                 ========= ------>GT1<-------MYC2  <---------AtMYB61            <----------ID1                        --------- -----ANAC46----------->HVH21         <---------AHL20(2)   --------->ANAC58               <---------ALFIN1 ------------------TaNAC69(2)         --------->AHL20(2)   --------->ANAC58--------->AHL20(2)<-------MYC2   gtgaatagggacacgtgtcaggaagtagtggtgtaaacatttaaaagaaaacgaagacgacaagcaatatgatcacatataatatggtccatccacgtgg  14153700                                                               ------->MYC2  <-----------GT1                                              <-------MYC3 ----->GT1                                                   ------>MYB83 >ANAC46                                                    --------->MYB52(1) >O2                                                       --------->TOE2(2) -O2                                              ----------->GT1 <---------ANAC58 >TGA1a                                       <---------DEAR3(1)  <---------ANAC58 -PIF3(3)                                    <---------ORA47(1)------->MYC3 -TGA1a                     <----------DOF2 <------ZmHOX2a(1)------>MYB46(1)                   ------ ======================================bZIP_DOF----------->GT1 <-------MYC2         <------ZmHOX2a(1) >PIF3(3)          <---------AHL20(2)    <------ZmHOX2a(1)--------->MYB46(3)      <---------TOE2(3)   ttattttcaatttgctaaaatgtaattgtacttttgttcacgaggaggacggtggaaaaaaccaacgtgcttattctatgagtttaggaagagactcaaa  14153800                         <---------WRKY18(1)                   <----------DOF2           --------->ANAC58                                  ------>ZmHOX2a(1)      <-------MYC3       --------->ATHB12              ------>ZmHOX2a(2)      <-------MYC2   --------->ATHB12                  =============HOX2a_HOX2a      ------->MYC3  <---------YAB1                     xxxxxxxxxxxxxxxx>smallRNA(s)      ------->MYC2  --------->ICU4                 --------->KAN4(1)     <----------TaMYB80<---------WOX13(1)          <---------KAN4(1)                        <-------- ---->DOF2 --------->ANAC58                       <---------KAN4(2)             --------->ZAT6   agatagcatatgcgagcaaaacatgattgactgggagcccataacatctcagaatgatccatcctctttcattttgtacataacactcccatattatatg  14153900                                                                                 ----------->GT1                                                                              -------->P                                                                              ------>MYB83                                                                              ------>MYB46(1)                                                                              --------->MYB52(1)                                                                             --------->MYB55(1)                 <---------ARR11(3)                                         ----------->HVH21               --------->ANAC58                                             --------->DEAR3(1)    ---               --------->ANAC58                                            --------->MYB46(3)   -----         <---------ANAC58                                                --------->MYB52(1)     <----         <---------ANAC46               <---------ICU4       <---------YAB1--------->DEAR3(2)  <-----         <---------ANAC58     ------>ZmHOX2a(1)       <---------MYB59  <---------MYB52(2)      ------ --------->TOE2(3)      <-------TEIL<---------YAB1   --------->ANAC46  --------->MYB46(3) --------->ANAC55(2) -AHL20(2)   <---------AtLEC2--------->TOE2(3)       --------->ANAC55(2)------->GAMYB     <---------ANAC55(2)   aaaccgtagttgtttgcaagaactgattcatcctaattctaattagcacatatatacttaactatgagtatcaacaaaccgaccggttgaatacatatta  14154000  Previous    Next  AGI:  At2g33380.1    Description:  RD20 (RESPONSIVE TO DESSICATION 20); calcium ion binding. similar to ATS1 (ARABIDOPSIS THALIANA SEED GENE 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT4G26740.1); similar to RD20 [Brassica juncea] (GB:ABX10750.1); contains InterPro domain Caleosin related (InterPro:IPR007736) Range:  from: 14151907    to: 14153547    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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