Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------ZAT18                       ------>NtERF2                --------->ATHB12               <---------YAB1              ------>ZmHOX2a(2)             --------->GLK1(1)             <------ZmHOX2a(2)             <---------GLK1(1)            <---------ARR14(2)            <-----------ARR10            --------->ARR14(2)            <---------AGP1           <---------CCA1(2)           <---------ARR14(1)         ------>ZmHOX2a(2)                      <-----------GT1        <------ZmHOX2a(2)             --------->HSFB2a(2)       --------->ARR14(2)       <---------GLK1(2)<---------At5g28300  --------->LBD16       <---------ARR14(2)   ---------->DOF2<---------ICU4        --------->YAB1  ------>MYB83      <---------GLK1(1)--------->ZAT18<---------HSFB2a(2)     --------->YAB1     ------>MYB46(1)    <   ctcactggagatcggatctcattggtgcccaaaagaatttctcgataatttcacagtgctacaagaatcatccgaagtaaaccaaacaacatcactcaaa  14137800                                               <---------ANAC58                                               <---------ANAC58          ------>ZmHOX2a(1)              ---------->DOF2     <---------GLK1(1)                --------->At5g28300             ---------->DOF2     --------->GLK1(1)               ----------->GT1              <---------At4g35610 ---------ANAC55(2)                --------->RAP2.6(3)            --------->At4g35610     <----------DOF2   ttacgagaaatccttccagtgagaacaaaaaaaacaagacggtaaaagtacttggcagtgcttaattcagctcaaagcttaccgatatatgtctttcgat  14137900                                                                                            ---------                                                                                          ------>MYB46(1)                                                                                          ------>MYB83                                                                                         ----------->RAV1(1)                                                                                        --------->AtMYB61                                                                                       --------->MYB46(3)                                                                                       <---------MYB52(2)                                                                                      ------>NtERF2                                                                                     --------->DEAR3(1)                                                                                    --------->ERF1                                                                                    <------NtERF2                                                                                    --------->ATERF1(1)                                                                                   <---------RAP2.6(3)                                                                                   <---------ATERF1(1)                                                                                  --------->RAP2.3(3)                                                                                  <---------bZIP60(1)                                                            ------>ZmHOX2a(1)     >>>>>>>>>AtERF-4                                                    --------->HSFC1(2)            >>>>>>>>>AtERF-3                                                    <---------HSFC1(2)            --------->RAP2.3(2)                                                    <---------HSFB2a(1)           --------->RAP2.6(2)                                                    --------->HSFB2a(1)           --------->DEAR3(1)                                                   --------->ARR14(2)             <---------ATERF1(2)                                                --------->LBD16                   --------->ATERF1(2)                                               --------->ANAC46                   --------->bZIP60(1)                                              <---------LBD16                    --------->RAP2.3(1)                   <---------ICU4            <---------ALFIN1                    --------->ERF1                  --------->ICU4            <---------REM1(2)       ---------->DOF2------>NtERF2  ---       <---------HSFB2a(2)                <---------TCP16(1)--------->LBD16     <---------ATERF1(1)       --------->HSFB2a(2)         --------->MYB46(3)     <---------LBD16       <---------ZAT18   ---   <---------CCA1(2) ------>ZmHOX2a(1)    <---------TCP20 ----------->RAV1(2)  --------->ALFIN1 -----   tagtcgtctctcgaagagtaatcctgacttcgtcgaaaccactggctccacgggaacttctcctgaaactgaaagaacacagtgccgccaccaacatcaa  14138000         --------->TOE1(3)                                                              <---------ZAT6 >TOE2(3)----------------->AG                              <---------ANAC58   <------ZmHOX2a(1)     < ------>YAB1---------->DOF2                            <----------DOF2      <---------TOE1(2)     <-- ------>TOE2(3)               --------->AHL20(2)  ---------->DOF2         --------->TOE1(2)--------->CCA1(2) --->P   --------->TOE2(3)----------->GT1 --------->CCA1(2)<---------ANAC58 <---------TOE2(2)<-------   ccataagaaaaccctaaatcggcatattgagaaaaaatagagagagacgactgaaagctttacttgcacagttcatcgtaggaagaacgagtgatacgac  14138100                                                                                                    <                                                                                                   --                                                                                 --------->ANAC58 <--                                            <------NtERF2                 ------>NtERF2         <----                                           <---------ATERF1(1)         <---------ATERF1(1)  ---------                                        <---------PCF2                <---------DEAR3(1)  >>>>>>>>>>AtSR1    --------->HSFB2a(2)                 <---------ANAC46             <---------LBD16      <---------LBD16    <---------HSFB2a(2)                <---------DEAR3(1)            --------->SPL7    ---------->DOF2   <---------TOE2(1)            <-----------HVH21                  <---------SPL7--------->ANAC58<---   <---------TOE1(1)           ------>ZmHOX2a(1)         <-----------GT1--------->RAP2.3(1)--------->ANAC46 ---------SPL7          --------->ARR11(3)<---------DEAR3(1)       <-----------HVH21  <---------ARR14(2) -------------AtSPL3    <---------ARR11(3)--------->ALFIN1      <---------LBD16---------->DOF2------- ---ID1            <---------REM1(1) --------->ALFIN1   <-----------GT1--------->LBD16--------->ARR14(2)   gaagtacgagaactcaggtcgatgtagaacttcctgtgagtggggcggagcaagggttttatcttctccggtccggcgctacaaagcaaaaacgcggaag  14138200                                                                              ------->GAMYB                                                                            <---------TOE2(3)                                                              <---------AHL20(2)                                                              --------->AHL20(2)      --------->ATHB12                                       <---------AHL20(1) ------NtERF2                                                --------->AHL20(2) ------->LBD16                                          ------------>CBF    <---------TOE1(3) -------LBD16                                      <---------TOE2(3)       <---------DOF5.7(2) -----ZAT2                     --------->ZAT6--------->AHL20(2)          --------->DOF5.7(2) >LBD16                      *TSS            <---------AHL20(1)         <----------DOF2 ------LBD16                 <-----------GT1 --------->AHL20(1) <------------CBF           <---------YAB1 -->SPL7           --------->CCA1(2)   --------->ANAC55(2)   <---------AHL20(2) <------ZmHOX2a(2)   <   ccgggaaatggttgaagagagagacgacgattaacactctcacttgatatattagggattcaatttaattgggcctttaacgatcaccttcttatatttg  14138300                <---------ATHB12                --------->MYB46(3)               -------->P               ------>MYB46(1)           <------ZmHOX2a(2)                                        <-----------GT1   --------->AHL20(2)                                      --------->ARR11(3)                    ---- ----------DOF2------>MYB83                                --------->GLK1(2)     <-----------------AGL3   ggcttttaaatcgatccaaccattagaatttgaaattgacgacgttttatattagttttaaaatctgttttaactcatgttgaactaaaattgggcattc  14138400               --------------->AtSPL8               <---------------AtSPL8        <--------P        <---------WOX13(1)       <-------GAMYB                                                <---------AHL20(2)      <---------MYB46(3)                                          <---------RVE1(1)     <---------TOE2(3)      --------->ATHB12                     <---------GLK1(2)     <---------YAB1<-------TEIL                                  <---------ARR11(3)  --------->ICU4   ------->TEIL       <---------YAB1             --------->ARR11(3)      <---------ANAC46 ------->GT1 <-------TEIL   <---------ICU4                  <-----------GT1      <-----------RAV1(1)   agtaattttggttgattcatgtacatttactcattagattataaaacaaacccattgttttgttacagatttttttttgttatatgttgttgcgactatg  14138500                                                                                              -------                                                                                              -------                                                                                              -------                                                                                            <--------                                                                                            ---------                                                                                           ------>MYB83                                                                                           -------->P                                                                                           ------>MYB46(1)                                                                                          -----------                                              <---------MYB46(3)                         --------->AtMYB61                                          <------MYB46(1)                                --------->MYB46(3)                                          <------MYB83                                  --------->MYB46(3)                                         --------->MYB111(1)                           ------>MYB46(1)                                         --------->MYB46(2)                           --------->ANAC46                                         --------->MYB59------->TEIL                 --------->MYB46(3)                                        <--------P <----------DOF2   <---------ARR14(2)------>MYB83      ---------->DOF2                   <---------MYB55(1)          <---------CCA1(2)<---------MYB55(2)   ttttaatctaaagaacgagcacaaatatcgaatgagaccgaggtaggtttgttctttgcatcttaatcgcctatcttatacccattacccaccaacactc  14138600                                                ------->GAMYB              ------>ZmHOX2a(1)                                               --------->MYB46(3)         --------->TOE2(3)                  --------->YAB1               <---------MYB52(2)       <------ZmHOX2a(2)        ------>MYB83                      --------->YAB1               <---------ARR11(3)     --------->MYB46(3)              ------>ZmHOX2a(1)                 --------->ARR11(3) -->ANAC46   --------->AHL20(2)  <---------ARR14(2)                    <---------ARR14(2) -->ANAC58  <<<<<<<<<ARR2        --------->ARR14(2)                    --------->ARR14(2) -->ANAC58--------->WOX13(1)    <---------CCA1(2)                     --------->GLK1(1) -ALFIN1------>MYB46(1)  <-----------GT1 <------ZmHOX2a(2)  --------->MYB46(3) >ZAT6 ----------->RAV1(1)      --------->GLK1(1)         <-----------GT1------>ZmHOX2a(2) >RAV1(1)--------->MYB46(3)     <---------GLK1(1)  --------->YAB1     <---------GLK1(1)   catactcaccaacaatcaaataacaattaacaacatatcctcgatcacaacaaacaaaatcaaccgttcaagagatcctaaaaatatgttctaagatgaa  14138700  Previous    Next  AGI:  At2g33340.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G04510.2); similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G04510.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ80643.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71468.1); similar to hypothetical protein OsJ_030576 [Oryza sativa (japonica cultivar-group)] (GB:EAZ16367.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain Zinc finger, RING/FYVE/PHD-typ Range:  from: 14133294    to: 14138229    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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