Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->ZAT14                                     --------->ZAT18                                     <---------ZAT18                                     <---------ZAT14                                 --------------->AtSPL8                                <---------ANAC58                                <---------ANAC58                                <---------ANAC46                           ----------->RAV1(2)        ------>ZmHOX2a(1)                     ---------                           --------->ZAT2        <---------GLK1(1)                    --------->AHL20(2)                          --------->GLK1(2)  <---------HSFB2a(2)                      <---------AHL20(2)        <-------TEIL   --------->ANAC58      --------->HSFB2a(2)        --------->AHL20(2)  ---------       --------->CCA1(2)  ------->TEIL<-----------------AGL1        >>>>>>>>>>GT-3b  <---------ATHB12    --------->MYB59    --------->ANAC46  <----------DOF2         ----------->GT1     --------->AHL20(2) ---->TOE2(3)          --------->ANAC58  <---------DAG2        ---------->DOF2   <---------ATHB12  <-   acaaattagatacaaaatgaagaacacgaacctggcttgtacactttctggcaatcctgttgaaacaaagaaaaataaatcccatcaataaatgaagcaa  14085400  --------->LBD16 <---------HSFC1(1) --------->HSFB2a(2)                                                                               -- <---------HSFB2a(2)                                                     <---------ARR14(2)        -- --------->HSFC1(1)                                                      --------->ARR14(2)        -- >ANAC58      --------->AHL20(2)                                         --------->GLK1(2)    <------ >ANAC58  ---------->DOF2                                            --------->YAB1      ----------->RAV1(1) --------------------WRI1                    <------NtERF2          <------ZmHOX2a(2)    --------->MYB52(1)   cttccagaaatacaaagaaaatagaagatgctaaactctccaatggcagagaaatattcaattcaatccgatcaaaatccgattcaattcccaacagttt  14085500                           --------->YAB1                          <---------ATHB12                        --------->WOX13(1)                      ------>ZmHOX2a(2)                                                             -                     <------ZmHOX2a(2)                                                             <-                    <-----------ARR10                                                             <--                    <---------ARR14(2)                                                            ---     <----------DOF2--------->ARR14(2)                                                            --- ------->ANAC58    <------ZmHOX2a(1)                                      ---------->DOF2         <-- ------->ANAC58 --------->HSFB2a(2)                                    --------->ANAC46--------->DAG2 ------->ANAC46 <---------HSFB2a(2)               --------->DAG2    --------->ARR14(2)---------->DOF2 ---GLK1(2)    <---------ANAC46                  ---------->DOF2 --------->YAB1  >>>>>>>>>MYB2    ---   ctcgcaactttccgatttcgaggatccaatcagaaacaaattcacagaaaataaagcagcattggaatcatatacacaaagaaaaccaaaaagtcgaata  14085600         <----------DOF2         --------------------->WRI1      ------>MYB46(1)      ------>MYB83    <---------MYB59  -------->P                                  ----------------------->TaNAC69(2)  ------->TEIL --------->ANAC58              <---------MYB46(3)                                  ---- ----->ZmHOX2a(2)                     <-------TEIL                                               ---- -----ZmHOX2a(2)                    --------->ARR14(2)     --------->ANAC58                    <----- -------AGP1   --------->ANAC46     <---------ARR14(2)     --------->ANAC58              <------ZmHOX2a(2) ------>ARR11(3)               --------->ANAC58   <---------GLK1(2)                    <---------At4g35610 ------>AGP1   --------->ANAC58--------->ANAC58<---------WOX13(1)------->GAMYB         --------->At4g35610 -------ARR11(3)          <----------ARF1    --------->ATHB12 --------->MYB52(1)<---------AHL20(2) ------>ARR14(2)          <----------ID1    <---------YAB1 --------->ANAC46     --------->AHL20(2)   gatctacctagctttggaagcaacgttggagacaagccgatacatggtgattgattctctcacacaaccgagaagattgcaattaattcagatcagaccg  14085700                                                                     --------------->AGL15                                                                     <---------------AGL15                                                                     <---------HSFB2a(2)                                                                  --------->GLK1(2)                                                                 <---------GLK1(2)                                                                 --------->ARR14(2)                                                                 <---------ARR11(3)                                                                 <---------ARR14(2)                                                                --------->HSFC1(2)                                                                --------->HSFB2a(1)                                                         ------>ZmHOX2a(2)                                                        <------ZmHOX2a(2)                                                       --------->ARR14(2)                                                       --------->ARR11(3)                                                       <---------ARR11(3)       --------->At4g35610                         <---------At4g35610                         ------       ----------->GT1                          ---------->DOF2 <---------HSFB2a(1)           <------ ---------->DOF2                         <------ZmHOX2a(1)      <---------HSFC1(2)           <------- -->MYB83                                =======================HOX2a_HOX2a            <---------TOE2(3) -->MYB46(1)                             ======================HOX2a_HOX2a             <---------TOE1(3) ----MYB59          <---------GLK1(2)   ----------->GT1<---------ARR14(2)--------->ANAC46  <---------   aactaaagaagctaaattgacaaattctctcactcgtagatgaggagaaatgaagcagatcgtcgaagattctataagcagtagggtttagggttttacg  14085800                     <------MYB46(1)                  <---------ANAC46               ------>ZmHOX2a(2)                  <---------ANAC58               <---------LBD16             --------->AHL20(2)                  <---------ANAC58              --------->ARR14(1)           <---------AHL20(2)                 --------->ATHB12               <------ZmHOX2a(2)           --------->YAB1             <---------ICU4                    <---------ARR14(2)    <---------MYB52(1)             --------->ATHB12            --------->ARR14(2)         --------->LBD16 --->ANAC55(2)<------------CBF           <---------ARR14(2)        --------->ANAC46 ---TOE2(3) --------->ICU4             --------->LBD16             --------------->AtSPL8    -------- ----GT1*TSS<---------YAB1     <-----------GT1 --------->ARR14(2) <---------LBD16         <---------- -DOF2 <---------ZAT2<------MYB83    <---------LBD16          ----------->HVH21          <----------DOF2   ttttctccaagctcatcattgcttggtcgagttttagcctccggttttggatccggttcgagttttgacccggtactattttaatatgggccttttaaag  14085900                   --------->AHL20(2)          <-----------GT1       <---------ICU4                                                               --------->GLK1(2)       <--------HAHB4                            <-----------GT1                    --------->ARR14(2)       --------->ATHB51                      <---------GLK1(2)                      <---------ARR14(2)      --------->ICU4        *TSS         ---------->DOF2                   <----------DOF2  <<<<<<<ZML2 -->DOF2 <---------YAB1     --------->DAG2   --------->ARR11(3)       <---------WOX13(1) --------->HSFB2a(2) -TBP <---------YAB1       ---------->DOF2   <---------ARR11(3)    <---------YAB1  <---------GLK1(2)   cccagttcattattacaacattttaaaaaaaaagtcaccaaaaaaaagatttttcatttcatttcatttctgattgtctttctcagaatccctagaacac  14086000                                                                                                 <---                                                                                                 ----                                                        <------NtERF2                            <---                                                        <---------------------WRI1               ----                                                      <---------DEAR3(1)                        -----                   ============================HOX2a_HOX2a                                      <----                   <------ZmHOX2a(2)                 --------->ATERF1(1)--------->ANAC58      xxxxxxx                  --------->ARR11(3)             --------->MYB52(1)     --------->ANAC58     <-------              ---------->DOF2                   ----------->HVH21--------->ANAC58            <-------       <---------TOE2(3)         --------->WOX13(1)<---------ANAC46<------ZmHOX2a(1)    <---------ZAT6      --------->MYB52(1)       <------ZmHOX2a(2)----------->TGA1 <---------TOE2(3)  <---------ANAC58      <-----------GT1          ================HOX2a_HOX2a   --------->YAB1         <---------ANAC58    <---------WOX13(1)    <---------LBD16     --------->At4g35610--------->ANAC58   <---------ANAC46 --------->ICU4   <---------ARR11(3)    <------ZmHOX2a(1)   <---------YAB1    <------ZmHOX2a(1)<-----   acactgattaacgaatcaaagatcgatttggggatcaatcgaggaagaagatgacggaggcgatgataaggaagaagccaggaatggcgagtgtgaagga  14086100                                                                       --------->ANAC58                                                                       <---------ANAC55(2)                                                                       --------->ANAC55(2)                                                                       --------->ANAC58                                                                       --------->ANAC46                                                                      <---------LBD16                                                               ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)                                                              --------->GLK1(1)                                                              <---------GLK1(1)       <---------ANAC58                         <---------MYB52(1)   <---------ALFIN1       <---------ANAC58                         --------->ARR14(2)  <---------REM1(2)    <---------MYB52(1)                          <---------ARR14(2) ----------->RAV1(1)   <-------GAMYB                           <-----------HVH21 <---------ARR14(2)  <---------ANAC58                         <---------ARR14(2)<---------AGP1  <---------ANAC58                         --------->ARR14(2)--------->ARR14(2) ------GLK1(1)           ----------->RAV1(2) --------->SPL7  <---------ARR11(3) ----->CCA1(2)         --------->DEAR3(1) <---------DEAR3(2) <---------ARR14(3) -------TaMYB80        <---------ALFIN1  --------->DEAR3(1)  --------->ARR14(3) ----->GLK1(1)         --------->AtMYB61--------->ATERF1(1)  --------->ARR11(3) ---->ARR14(2)        --------->MYB46(3)<------NtERF2        <---------ARR11(1) -----ARR14(2)  <------MYB46(1)        ------>NtERF2        <---------ARR14(1) xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    --------->ANAC46      <---------CCA1(2)                     --- --TOE2(3)      <------MYB83     <---------GLK1(2)         --------->LBD16     ------>MYB46(1)   <--- --TOE1(3)<-----------RAV1(2)    --------->ARR14(2)       <---------TOE1(2)    ------>MYB83      <--- -ZmHOX2a(1) <------ZmHOX2a(1)   <---------ARR14(2)      <---------LBD16 ----------->HVH21    <------   tatgccgttgcttcaggatggtccaccacctggtggattcgcgccggtccgatatgctcgccggatctccaacacgggacctagcgccatggctattttc  14086200                   <---------ANAC58                   <---------ANAC58              <----------DOF2                                --------->ANAC58            --------->ABI4(2)                                ----------->GT1          <---------MYB52(1)                                 --------->ANAC58       <---------LBD16                                      <---------TOE2(2)     <---------ARR14(2)                                    <-----------RAV1(2)     --------->ARR14(2)                                   --------->LBD16    <---------MYB52(1)                                  <---------LBD16 ----------------->AG                   <-----------HVH21--------->ANAC46                          -- ----------------->AGL1                <------MYB46(1)<---------ARR14(2)                         <--- --->ZmHOX2a(1)    <---------ANAC46    <------MYB83   --------->GLK1(2)                        <----- ------ANAC58<---------ANAC58        <--------P       --------->ARR14(2)                       <----- ------ANAC58<---------ANAC58  ------->TEIL     ----------->RAV1(1)                            <----- -----GT1--------->LBD16  <---------ANAC46      =======================RAV                    -------   cttaccgtttccggtgcttttgcttggggcatgtaccaagttggtcagggcaacaaaatccgcaggtaattagataatgagatgtggaatttgagtttgg  14086300  Previous    Next  AGI:  At2g33210.1    Description:  chaperonin, putative. Identical to Chaperonin CPN60-like 1, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q8L7B5;GB:O49314); similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G13860.1); similar to HSP60 (Heat shock protein 60), ATP binding / protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT3G23990.1); similar to GroEL-like chaperone, ATPase [Medicago truncatula] (GB:ABE86688.1); similar to Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) (GB:Q05046); similar to Chaperonin CPN60, mitochondrial precursor (GB:P35480); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844); contains Inter Range:  from: 14081984    to: 14085808    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g33220.1    Description:  similar to MEE4 (maternal effect embryo arrest 4) [Arabidopsis thaliana] (TAIR:AT1G04630.1); similar to unknown [Populus trichocarpa] (GB:ABK95941.1); contains InterPro domain GRIM-19 (InterPro:IPR009346) Range:  from: 14085928    to: 14087234    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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