Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->TOE2(3)  --------->ARR11(3)  <---------ARR11(3)                                                                               -- <---------CCA1(1)                                                                                 -- --------->RVE1(1)                                                                             ------ <---------RVE1(1)                                                                             ------ --------->CCA1(1)                                                  <---------At4g35610   ----------- --------->GLK1(1)                                                  --------->At4g35610 --------->ZAT2 <---------GLK1(1)    --------->ANAC58                              --------->ZAT2      <---------At4g35610 ---------ARR11(3)    --------->ANAC58                              <---------ZAT2      <---------ZAT2 -------->ARR11(3) --------->ZAT14                              <---------ATHB12        --------->At4g35610 ----->DOF2        <---------ZAT14                         ------>ZmHOX2a(2)        <-----------GT1--   aagatatctatctcaatccagtgaacgaaatacaaaaacaaaatccaagtcttgaatttgatctcaatcgagctgaaacttaaaattttcagctcacagg  14057800                                                          ------->TEIL                                                    <---------AHL20(2)                                                   --------->AHL20(2)                       <---------At4g35610      <---------------AGL15        --------->TOE2(3)                       --------->At4g35610      --------------->AGL15      <------ZmHOX2a(2) ------->ANAC58 <---------YAB1             <---------HSFB2a(1)           ------->GAMYB ------->ANAC58--------->AHL20(2)          --------->HSFC1(2)    <------ZmHOX2a(2) --->ANAC58    <---------AHL20(2)          <---------HSFC1(2)   --------->AGP1  <---------ICU4 --->ANAC58    <---------AHL20(1)          --------->HSFB2a(1)  <---------ARR11(3)   --------->LBD16 >HVH21       --------->YAB1           ----------->GT1 <---------YAB1   --------->MYB46(3) ------->ANAC46--------->AHL20(1)--------->YAB1----------------->AGL3--------->MYB46(3)   cacgcctcgaatcaaattataattcagcatcaaaatcaaaatcgaaaattccatataatgaatccagatcaacaacgatccataatccccagactgcaaa  14057900                     ------>ZmHOX2a(2)                    <------ZmHOX2a(2)                   --------->ARR11(3)                   <---------ARR11(3)                         <---------ANAC58               ---------->DOF2                      <---------YAB1             --------->AtMYB61                    <---------ANAC46           <---------HSFB2a(1)             ------->GAMYB                       --------->ALFIN1            --------->HSFC1(2)            --------->MYB46(3)                  <---------ZAT14              <---------HSFC1(2)    >>           --------->ANAC58                    --------->ALFIN1           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           --------->ANAC58                  --------->ALFIN1 <---------ANAC58                  >>>>>   cacaagagaagacaaccaaaagatcgcgatagatcgagagagagagagtgtgtggtgatagaatgcttacagatagagaagcctcgtaattgtgcgaaga  14058000                                                                                            <--------                                                                                         ------>ZmHOX2a(2)                                                                                         ============                                                                                        <------ZmHOX2a(2)                                                                         <---------TOE2(3)<----------              <---------At4g35610                                       ---------->DOF2 =============              <---------GLK1(1)                                  <---------At4g35610   --------->ARR14(2)              --------->GLK1(1)                                 --------->LBD16        <---------AGP1            <---------------------WRI1                      <-----------GT1            <---------ARR14(2)  >>>>>>>>>TBF1                                 <----------DOF2 ------>NtERF2  <---------AHL20(2) >>>>>>>TBF1<------NtERF2                       <---------DAG2 <---------RAP2.6(2)    <---------CCA1(2) >>>>TBF1 <---------DEAR3(1)                 ------>ZmHOX2a(2)<---------LBD16 --------->AHL20(2)   agaagaagaaggtcggagatgctcaagaagaacgcgttgtctctcgatcgctttctccattttttccggctgattaaagataaaattcggatctgttgtt  14058100                                                                                            ---------                                                                                           <---------LBD16                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                           <---------ANAC55(1)                                                                                           <---------ANAC46                        --------->ANAC46                      ----------->GT1             <---------LBD16                        --------->ANAC58                     <---------TOE2(3)       ----------------                        --------->ANAC58                     --------->DAG2         <----------------                     <---------REM1(2)                       <---------TOE1(3)      -----------------            <---------ARR14(2)                         ============================================== -MYB52(1)  --------->ARR14(2)                      --------->ICU4 --------->At4g35610  --------->ARR14(2) =================HOX2a_HOX2a                       <---------YAB1 <---------At4g35610  <---------ARR14(2) -RAV1(1)  <------ZmHOX2a(1)            <---------LBD16<---------------AGL15    <----------DOF2     - =================HOX2a_HOX2a           ------>ZmHOX2a(1)--------->YAB1    <---------At5g28300 <-----   ttttctcagagaaggatttgttctacacgaaaactcacagtcctcgggtttgtgatcatttataaggtaagatgactcaccgctttgcccgttccgggta  14058200                        --------->AHL20(2)                                        ----------->HVH21                 *TSS--------->YAB1           --------->ICU4                  --------->At4g35610        <---------------AGL15            --------->YAB1                   --------->ARR11(3) >LBD16 --------------->AGL15            --------->ANAC55(2)      --------->AtMYB61 ->AGL1----------------->AG    --------->ARR11(3)             --------->MYB46(3) <-----------HVH21 -AGL1 ----------------->AGL3  <---------ARR11(3)             <----------ID1  ----------->RAV1(2) >AGL1 ----------------->AGL2 --------->RVE1(1)          <----------DOF2  <---------ARR11(3) ========================MADS_MADS      ---------->ID1  <---------ANAC58 --------->RVE1(1)       ---- -------->YAB1 <---------ANAC55(2)  <----------DOF2     <---------ANAC58 --------->CCA1(1)       <--- ---P  ----------------->AGL1 --------->CCA1(1)     <----------DOF2  --------->AHL20(2)    --------->CCA1(2)   aatgataatcccaaaataagtaagaataaaaaatatctctttttcgtaatatttctttgcttaaacgaccaaaaaatatcatctgtgacagcgatacaag  14058300                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)                                                            -------->HAHB4                   --------                                                            <---------ICU4                <---------MYB46(3)                                                            --------->YAB1               <---------YAB1                                                           <---------ATHB51            <------MYB83                                                           --------->ICU4              <------MYB46(1)            ----------->GT1                           --------------->AGL15           --------->MYB46(2)      ------>ZmHOX2a(1)                              --------->ZAT6--------->YAB1     <---------AtMYB61 ----->ARR11(3)                                  <---------MYB59   --------->AHL20(2) <---------MYB46(3) ------ARR11(3)          <---------ATHB12     <-----------GT1 <---------YAB1  --------->ZAT6<--------   ttcttatcctatagttgtaaaatccaaatcaaacagtttttagcctaatgaccttactctaattatgaattaaaatgttcacactggtttggtgattgtt  14058400                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                         --------->DEAR3(1)                                                                                         --------->ANAC46                                                                                         <---------ALFIN1                                                                                        --------->MYB46(3)                --------->ICU4                                                          <------NtERF2               <---------TOE2(3)                                                        --------->ATERF1(1)            <---------WOX13(1)                                                         <---------ATERF1(1)          --------->ATHB12                                                     <---------TGA1a          <--------ATHB1                                                       <---------O2          -------->HAHB4                                                       ======================          --------->ATHB51                                                     <---------ANAC46         <---------ATHB51                                                      <---------ANAC58         --------->AHL20(2)                                                    <---------ANAC58         <---------AHL20(2)                                                 ----------->TGA1  <---------ZAT6<---------YAB1                                              ----------->HVH21  <-----  ----------->GT1                                  <---------YAB1         <---------ANAC58 <---------  <---------ANAC46 <---------YAB1        <---------At4g35610              <---------ANAC58------>NtERF2 --->GT1 --------->ICU4                  --------->ZAT2           <---------TOE2(3)    ------>NtERF2 -WOX13(1)<---------ICU4  --------->YAB1 --------->At4g35610    --------->CCA1(2)     --------->PCF2   aatagtgtgaaataattgatgatgagagtcatagtcatagataagctgagagtgtgatagaagaagataagattaggcgtgacgtttgcccccgcccgtt  14058500                                            ------>ZmHOX2a(2)                 <---------ANAC58         <---------ARR11(3)                 <---------ANAC46         --------->ARR14(2)                 <---------ANAC55(1)      <---------ARR14(2)            <---------ANAC58              <---------AGP1            <---------ANAC58              --------->ARR11(3)          <-----------GT1            <---------ANAC55(2)          <---------CCA1(2)         --------->YAB1   <----------DOF2--------->LBD16      <---------HSFB2a(2)      --------->ANAC55(2)                 - =============bZIP_DOF  <-----------GT1--------->HSFB2a(2)    <-----------GT1                       - ----MYB52(1)    <---------ANAC58     <---------LBD16         <---------AHL20(2)                    - --------AGL1    <---------bZIP60(2) ----------->RAV1(2)   <---------ICU4------->GAMYB            <--   ttgggctttgaaatgcgtgccgtgtttttcatttccatcttctggatcttaatcttcttcatatttacataataaccccaactatttgtattacttctat  14058600                                                                                --------->DAG2                                                                 --------->ANAC55(2)                                                                <---------TOE2(3)----------->GT1      ---------->DOF2                                          <-----------GT1 ---------->DOF2      - -------->ANAC58          --------------->AtSPL8           <----------DOF2 ------>MYB83           <-- -------->ANAC58         ---------->DOF2                <---------AHL20(2) ------>MYB46(1)        <-- -------->ANAC46       <---------HSFB2a(2)              <-----------GT1   --------->MYB52(1)      <-- ---------GT1    --------->AHL20(2)              ------>ZmHOX2a(2)    <-----------GT1---------->DOF2<   ttacgccttaaagttgctattaattctaaaagtacccttcttgagacttgatcgctattttctttttacgttttaccaacgtaaagttaaagcccatatg  14058700  Previous    Next  AGI:  At2g33150.1    Description:  KAT2/PED1 (PEROXISOME DEFECTIVE 1); acetyl-CoA C-acyltransferase. Identical to 3-ketoacyl-CoA thiolase 2, peroxisomal precursor (PED1) [Arabidopsis Thaliana] (GB:Q56WD9;GB:Q93Z35;GB:Q9S7M3); similar to acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative [Arabidopsis thaliana] (TAIR:AT1G04710.1); similar to acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucurbit (GB:S72532); similar to hypothetical protein [Vitis vinifera] (GB:CAN81585.1); similar to glyoxysomal beta-ketoacyl-thiolase [Brassica napus] (GB:CAA63598.1); contains InterPro domain Thiolase (InterPro:IPR002155); contains InterPro domain Thiolase-like; Range:  from: 14054555    to: 14058217    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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