Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -          <------MYB83                                                                             <-     --------->ATHB12                                                                              <-     <---------ICU4                                                                               <--     <--------HAHB4                                                                          <-------     --------->YAB1                                            --------->ARR11(3)            <-------    <---------ATHB12                                        <------ZmHOX2a(1)                --------  --------->WOX13(1) <------ZmHOX2a(1)                   <---------HSFB2a(2)  <---------ANAC58    --- ----------HVH21 ---------->DOF2                         --------->HSFB2a(2)  <---------ANAC58    --- -----GT1 <------MYB46(1)                           --------->ZAT6       ---------->DOF2     --------   tcgtcaatcatttggtgagaaaaggatgacaatttctaaacgaagtttattctaactctctaggagataatgcctcaaaggcttacaaattgcaataaaa  14053500      --------->YAB1   --------->YAB1   <---------ICU4                                      --------->ANAC58  <---------YAB1                                       --------->ANAC58  --------->ICU4                                      ------>MYB83 -------->YAB1                                        ------>MYB46(1) --------AHL20(2)                                    --------->MYB52(1) --------YAB1                         --------->AHL20(1) -------AHL20(1)                      --------->AHL20(2) ---------->DOF2                       ------ --AHL20(2)                           <---------AHL20(2)------->GAMYB                          <----- --AHL20(1)                    --------->AHL20(2)   --------->AtMYB61                      <---------YAB1 ->AHL20(2)    --------->ATHB12<---------AHL20(2)--------->ANAC58                      <----------DOF2 ------>AHL20(2)           --------->ICU4        --------->ANAC46      >>>>>>>>>TBF1 <---------MYB46(3) ------>AHL20(1) <---------WOX13(1)--------->YAB1--------->ANAC58   >>>>>>>>>TBF1   <---------AtMYB61 ->AHL20(1)   <---------YAB1<---------ICU4 --------->AHL20(2)    >>>>>>>>>TBF1      --------->ALFIN1   tataataataagaaatgtgattggaaatactaattaaaaataaaataaaacacaccaacgaaaggaagaagaagaagaagagagaggtggtttatgttta  14053600                                     --------->TGA1a                                     <---------TGA1a                                     <---------O2                                     --------->O2                                     --------->ANAC46                          <---------ALFIN1            ----------->ARR10        --------->bZIP60(2)                               <--------P         --------->At5g28300       ------->GAMYB                                     <------MYB46(1)        ----------->GT1  <------NtERF2                          --------->LBD16      ----------->GT1    --------->DAG2    --------->At4g35610 <---------MYB52(1)  <---------LBD16        <------MYB83   ============================================bZIP_DOF--------->LBD16              <---------MYB46(3)   ---------->DOF2    <---------At4g35610<---------DEAR3(2) <-----------GT1        <---------ANAC46 --->AHL20(2)     ------>ZmHOX2a(1)<---------ALFIN1    ----------->GT1             <---------ANAC58 ----AHL20(2) --------->ARR11(3)  --------->MYB46(3) <---------LBD16<-----------GT1<---------ANAC58   atttgtaaagcggtaacatcctgtagcggcactgcaaccacgtcggtatttgttatccggtttatccggtttaccatctggtttggctggtaagtttttc  14053700                                                                                                    -                                                                                                    -                                        ------>ZmHOX2a(1)----------->RAV1(2)               <---------ALFIN1                                    --------->ARR14(2)   <---------At4g35610       <----------DOF2  -                                    <---------ARR14(2)   --------->At4g35610 ------>ZmHOX2a(2)      -                            <---------ANAC58           <---------ALFIN1    --------->ARR11(3)  ------                            <---------ANAC58           --------->REM1(1)   <---------ARR11(3) -------   ttcaatgcttcgtaatctataaatctcttagcttgaagtatcctatggctcacatctacacctgaactcatcttcatgatctcttctttttctccaccgt  14053800                              <---------ETT(1)                             ------>ZmHOX2a(2)                            --------->CCA1(2)                            <------ZmHOX2a(2)                           --------->AGP1                           <---------ARR11(3)              ------>NtERF2                           --------->ARR14(2)              <---------RAP2.6(3)                           <---------ARR14(2)           ------>NtERF2         <-----------GT1  --------->GLK1(1)             --------->At4g35610       <-----------HVH21  <---------GLK1(1)          --------->At4g35610       --------->YAB1      --------->YAB1     ----------->ARR10           --------->ZAT2  <---------YAB1 -------->ANAC58      --------->SPL7              ---------->DOF2  <---------ICU4 -------->ANAC46    <---------SPL7             --------->ANAC58   <---------YAB1          <-------TEIL -------->ANAC58    --------->LBD16            --------->ANAC58  --------->ARR11(3)      <----------DOF2 -------->AtLEC2  <---------LBD16    <XXXXXXXXXXXXXXXXXXXXMIR773 <---------ARR11(3)   <---------ARR11(3) --->ORA47(1)    <---------At5g28300---------->DOF2  <---------At4g35610      --------->ICU4        - -->DEAR3(1)    <-----------GT1   --------->AtMYB61  <---------ZAT2--------->YAB1     --------->ARR11(3)   ccatgcaattgtcacattttaccggacgagatccgaccacaagcgctggaagcaaagctgccgagatgatcatcacagcgatgatcaagagcttcatgtt  14053900                                                           <---------ANAC46                                                          <---------TOE2(3)                                                         <---------DOF5.7(2)                                                       --------->DOF5.7(2)                           ---------->DOF2           <---------ANAC46                        <---------ZAT6               <---------ANAC58                               <  <---------YAB1        ----------->GT1      <---------MYB46(3)                                  <--- -------->YAB1        ----------->GT1<---------ZAT14 <---------ANAC58 <---------ANAC46 ----------->GT1   attcatcatcgagacttatcaagagagtgtaaagttgagagtagtagttgttgtttcgtttacgttgaaatggtttgtgatgaaacacttggttaatcta  14054000                                                                 ----------->GT1                                                          --------------->AGL15         ----------->GT1                                  <---------------AGL15        <---------TOE2(3)      <-------TEIL        --------->GLK1(2)                <-----------HVH21  <---------YAB1 <---------AHL20(2)               --------->ARR14(2)                --------->LBD16 <-----------TBP<---------AHL20(1)                <---------GLK1(2)        <---------ICU4 ----------DOF2 <---------AHL20(2)                <---------ARR14(2)    --------->YAB1     <-------TEIL ------ALFIN1   --------->AHL20(2)          <-----------GT1    ---------->DOF2<-----------GT1       -   cacttttatagaggttaattttttttgtagaggttcatcgaatatttgaccagattcttactcgaaaaagaaaatcaaaattactccgtcaaattcatgg  14054100                                                                                           <---------WRKY12                                                         <---------ARR14(2)               --------->WRKY18(1)                                                         --------->ARR14(2)               -----------                                                    <---------ANAC46                     <--------ZAP1                                               -------->HAHB4                           <------MYB83                                              <---------ATHB12                    ---------->DOF2   -                                          <---------AHL20(2)                 <---------ZAT6<---------WRKY38(1)                ------>NtERF2      ------>MYB83--------->ATHB12          --------->ZAT14<------MYB46(1)         <---------ARR14(2)        ------>MYB46(1) --------->ATHB12      <---------ZAT14<---------DEAR3(2)      --------->ICU4   ---------->DOF2    --------->AHL20(2)        ================================= -------->YAB1  <---------ZAT18------->TEIL<---------AHL20(2)       --------------->AGL15<-----------HVH21   aataagaaatgaatacggtgcccaaaaaagatgaacctacacaaataaatgattcagtggatttgttttgctctgtatagtgatcaaagtcggtcaattc  14054200                                    --------->ARR14(2)             ---------->DOF2     <---------------AGL15            <---------WRKY38(1)  --------------->AGL15            <---------WRKY12    ----------------->AGL1            <---------WRKY45    <-----------------AGL3           <<<<<<<<<<WRKY40     ----------------->AG           <<<<<<<<<<WRKY62     ----------------->AGL2           --------->WRKY18(1)  <-----------------AGL2           <<<<<<<<<<WRKY18  --------->GLK1(1)          <-----------HVH21  <---------GLK1(1)       <---------WOX13(1)  <---------ICU4     --------->ATHB12      --------->ATHB12    <---------AHL20(2)    <---------YAB1    --------->AHL20(2)    --------->ICU4    <---------AHL20(1)  --------->YAB1    --------->AHL20(1)  <---------ICU4 <---------ICU4        --------->ICU4                              --------->ANAC46                 < <--------HAHB4        <---------ATHB12 --------->YAB1<---------ANAC58                           ---- ->CBF<------------CBF <---------ATHB51<---------YAB1 <---------ANAC46                       <------- -------->ICU4    --------->TOE2(3) <---------ARR14(2)<---------ANAC58--------->MYB52(1)     -------- ================================================MADS_MADS       --------->ZAT6   <-------TEIL  <----   gcataattaattggtcaaagcctcaataatgatttccatatatgataacattgatggctcgtttttaacacaaaactgaggggatgcattggaacatgat  14054300                                             <---------ARR14(2)                                             --------->ARR14(2)                                             --------->ARR11(3)                          <---------AHL20(2)                            <---------LBD16--------->ANAC58                        --------->TOE2(3) -----------GT1      <-----------GT1       --------->ANAC58----------->GT1        ----------->GT1 ----->YAB1      <---------MYB52(1)        ----------->ARR10                 <---------------AtSPL8 --YAB1         <-------GAMYB  <---------MYB52(1)        ---------->DOF2 --------->HSFB2a(2) ->ICU4         <---------RAP2.6(3) ---------->DOF2   <----------ID1     <---------HSFB2a(2)        - -----YAB1     ----------->GT1--------->LBD16<---------ARR11(3)   --------->AHL20(2)     --------->AHL20(2)   tataacgtcttatactgccgttataacgtctccggtatcaaagacaagatactataacgaaaagaaaaaaaaatactagaaggaacgttatataaatagc  14054400  Previous    Next  AGI:  At2g33130.1    Description:  RALFL18 (RALF-LIKE 18). similar to RALFL14 (RALF-LIKE 14) [Arabidopsis thaliana] (TAIR:AT2G20660.1); contains InterPro domain Rapid ALkalinization Factor (InterPro:IPR008801) Range:  from: 14053598    to: 14053909    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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