Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->TOE1(2)                    <---------ARR11(3)           --------->TOE2(2)                    --------->ARR11(3)          --------->YAB1         --------------->AGL15        ------>MYB46(1)          <---------------AGL15                                              <        ------>MYB83            <-----------------AGL1                                             <-      <---------MYB46(2)        <-----------------AGL2                                             --      <---------MYB59           <-----------------AG                                 --------->ANAC58     --------->ANAC46    --------->YAB1         --------->GLK1(2)       --------->YAB1             -- ---HSFB2a(2)           <-------TEIL           --------->RVE1(1)----------->GT1      --------->ANAC46 -->HSFB2a(2)   --------->ARR11(3)     --------->MYB59    <<<<<<<<<<<<<<<<<LFY       --------->ANAC58   aaactataccaaacataagaactcgattcatatttctcaattaggcaaaaaatctaattcaaacaatggataaatcaaaacacaaacaagctacgcttac  14052200                                                         --------->AtMYB61         --------->AHL20(1)                          ----------->HVH21         --------->ARR11(3)                        --------->ALFIN1         <---------AHL20(1)                       ------->MYC2                                     --         <---------ARR11(3)                       --------->TOE1(2)   <------MYB46(1)           ----- ------ZmHOX2a(2)                                 ------->MYC3        <------MYB83              <---- --------ARR14(2)                                 <-------MYC2      <--------P                  <---- ------->ARR14(2)                                 <-------MYC3    <---------REM1(1)             <---- ------->AGP1                                   ------->TEIL    <-------GAMYB                   -----   agatcgagcaatattttgactcactgaatccattttcgacgaggtaattgaacgtgtgaccatcgcagttgtaggtaaacttgttgttagaagaaggaag  14052300             <---------ZAT2             --------->ZAT2             <---------At4g35610             --------->At4g35610                                          ------->PIF5      --------->ZAT18                           --------->ZAT14           <-------PIF5 ------->At4g35610                              <---------ZAT14      --------->SPL7                 < ---->HSFB2a(1)                                 <---------ZAT18   ------->GAMYB --------->ANAC58    - -----At4g35610                     <----------DOF2              --------------->AtSPL3     <------ZmHOX2a(2) -----HSFB2a(1)                   <---------ANAC58             --------->MYB52(1)          <---------ARR11(3) -----HSFC1(2)                    <---------ANAC58             <---------DOF5.7(2)         --------->ARR11(3) ---->HSFC1(2)      <---------WOX13(1)   <---------GLK1(1)  <------ZmHOX2a(1)   --------->ANAC58    <   cttctgaaggcactgagcagcgattgatgtgaaattgcctttgaaatctgtgaactcaacgaggataacggtaccacgagcgacgaaactgtagatcaac  14052400                                                                                                 ----                                                                                                 <---                                                   --------->DEAR3(2)                          <-----                                                 <---------PCF5                                ------                                                ----------->HVH21                             >>>>>>>                                              --------->ANAC55(2)               --------->ANAC58 <---                                              <---------ANAC55(2)               --------->ANAC58-----                                              --------->ANAC46              --------->ANAC58  >>>>>>>                 <-----------GT1             <---------LBD16                --------->ANAC58  <------            <---------AHL20(2)           <----------DOF2                  <---------ANAC58    >>>>>>>      ------>NtERF2                --------->ARR14(2)             --------->AHL20(2)          ------- -----------RAV1(1)                <---------ARR14(2)   ------>ZmHOX2a(2) <---------ANAC58    ------- -------->MYB52(2)                 --------->GLK1(2)   <------ZmHOX2a(2)  <---------ANAC46    >>>>>>> ---------MYB46(3)             ------>NtERF2<-----------GT1       <---------AHL20(2)   <----------DOF2   gattgttgcgccattttttttactcaaaaacgacgcgaatccgattttacgggaccgatctcagagatttatattggcgagcacgaaggctttagagatc  14052500      ----------->HVH21 ----->HSFB2a(2) ------HSFC1(1) -ZmHOX2a(2)                                                                    <---------TOE2(3) --->CCA1(2)                                                                --------->TOE2(3) >>GATA-4                                                                 <---------ARR11(3) ------HSFB2a(2)                                             --------->DAG2 --------->YAB1 ->ZmHOX2a(2)                                               ---------->DOF2 --------->TOE1(3) >>GATA-2                                        ----------->GT1          --------->ARR11(3) ---ARR11(3)                                 --------->GLK1(2)           <---------GLK1(1) >>GATA-1                  --------->GLK1(2) <---------ARR14(2) --------->ALFIN1<---------TOE1(3) -->AGP1  <---------At4g35610                --------->ARR14(2) <---------REM1(1) -->ARR11(3)        --------->REM1(2) ---------->DOF2  ---------->DOF2   --------->GLK1(1)   -------- >>GATA-3 --------->At4g35610    <------ZmHOX2a(1)--------->At5g28300<------ZmHOX2a(1)      >>>>>>>>>TBF1   tagaagacttgacgctgaaacgcgtagagaatcgaggactaaaagagaatacggtgaaaaagaaaagtgtaggagaaatcttaacgtagttgaagaagaa  14052600                                                        --------->ARR14(2)                                                        <---------GLK1(2)                       -----                             ----------->GT1            <------------CBF    --------->YAB1      -----                            --------->DAG2              <---------ARR14(2)--------->GLK1(2)   -------                     ----------->GT1          <---------ARR11(3)       ------------>CBF    <---------MYB59 --->GT1            *TSS   ---------->DOF2    --------->ARR11(3) <------------CBF       <------ZmHOX2a(1)   aaatcaaacccttgagttttagagggcaaaaaagttatatttcagaaagatttatgcagattgtgcaaattgaaacaatcttgaacttgaggacctaaaa  14052700                                            <---------AtMYB61                                    <------MYB83                                    <------MYB46(1)                               --------->DAG2<------MYB83 ---->ANAC58          ----------->GT1    <---------REM1(1)                                  --------- ---->ANAC58          <---------ANAC46   <-----------RAV1(1)                         <---------AHL20(2) --->DOF2--------->YAB1       ---------->DOF2<------MYB46(1)                      ------->TEIL   gcaaattcaaataatcaacttgtggggttttaaaaagttggtgatgttggtgtaatggtattttgttatttgatagtttcaacgtatttttatcagcgaa  14052800                                      <--------ATHB1                                      --------->ATHB51                                      <---------ICU4                                      --------->ATHB12                                     <---------ATHB51                            --------->TOE2(3)                          --------->WRKY12                                 --------->AHL20(2)      <-                          --------->WRKY38(1)       <---------AHL20(2)<---------AHL20(2)          <--           --------->ANAC58          <---------AHL20(2)               --------->AHL20(2)      -------  ------->TEIL          <----------DOF2 <---------WOX13(1) XXXXXXXXXXXXXXXXXXXX>MIR776      <-------- >At4g35610--------->ANAC58    <----------DOF2  ------>ZmHOX2a(1)    --------->YAB1  ---------->DOF2<   aatgaatttggataagctagtttgaactttgacctttgaataattggttcctatattatctaaatctactattaaaatttaaaacttaaaagtcatcaaa  14052900                     <---------AHL20(2)                     <---------ICU4                     <--------ATHB1                     --------->AHL20(2)                     <---------AHL20(1)              ----------->GT1            <--------P  --------->AHL20(2)           <-------GAMYB<---------AHL20(2)          <---------MYB46(3)        <-------MYC3 --------->YAB1   <-----------GT1  <---------YAB1                                                             <----- --------YAB1 <------MYB83   <---------AHL20(2)                                               <------ -------GLK1(2)   --------->YAB1                                    <---------ARR14(2)        ------- --->DOF2--------->ALFIN1<---------AHL20(2)                         --------->ARR14(2)  --------->TOE2(3) -YAB1  ------->MYC3--------->ICU4   <----------DOF2 --------->HSFB2a(2)        <---------ANAC46 ---------ICU4<------MYB46(1)--------->AHL20(2)      <---------HSFB2a(2)       <---------AtMYB61   gattattacatgtggttggataataattttataaattgtcttttttggggtatttgtagaaaatttggcatatttggggttttggtgtaatctaaattaa  14053000                                                                                              <------NtERF2                                                                                              <------                                                                                            <--------                                                                                            ---------                              ---------->DOF2                    --------->GLK1(2)        --------->ARR14(2)                   ---------->DOF2                           --------->YAB1               <----------             --------->ARR11(3)                          --------->AHL20(2)               <---------ARR14(2)       --------->YAB1        <------ZmHOX2a(1)           <---------AHL20(2)             <---------TOE1(2) ----AHL20(2)--------->AHL20(1)                         <---------YAB1             ------->TEIL ---AHL20(2) <---------AHL20(1)                       --------->YAB1             <-------TEIL ------- -->AHL20(2) <---------ARR11(3)                      <---------YAB1             --------->AtLEC2   --   atgactaaataagaatattttcaaagttataggaaagttcaatggtctagtcaccataataaatgataatctacaattctacatgcatcccatgtccgct  14053100  Previous    Next  AGI:  At2g33120.1    Description:  SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1). Identical to Vesicle-associated membrane protein 722 (VAMP722) [Arabidopsis Thaliana] (GB:P47192;GB:O49321); similar to VAMP7B (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7B) [Arabidopsis thaliana] (TAIR:AT1G04750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68808.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908) Range:  from: 14050546    to: 14052620    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version