Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             ------>NtERF2                                                      -------                           --------->LBD16                                                    -------                          <---------ANAC46                                                    <------                         <------NtERF2                              <---------YAB1            -------                         --------->ATERF1(1)                      --------->ATHB51           <-------                        --------->ABI4(2)                         --------->AHL20(2)         <-------                        ------>NtERF2                            --------->ICU4           ------>NtERF2   <---------ZAT18      <---------ATERF1(1)                  ------>NtERF2    =======================   <---------ZAT14     --------->ALFIN1                --------->MYB52(2)     ------>ZmHOX2a(1)   --------->ZAT14     <---------DEAR3(1)              <---------MYB46(3)    --------->TOE1(3)<------ -----GLK1(1)      <---------At5g28300                 <-----------RAV1(1)   --------->TOE2(3)<------ -DOF2         <------ZmHOX2a(1)      ------->TEIL <---------YAB1<---------MYB52(1) --------->MYB52(1)   atctgtgaactcgacgaggattacggtgccgcgagcgatgaaactgtagaacaacgattgttgcgccattattttggttccttaaaaaacgacgcgaatc  14050000          --------->ANAC46          <---------ANAC55(2)                              --------->CCA1(2)         <---------LBD16                                   <------ZmHOX2a(2)       <---------SPL7                                     <---------ARR11(3)    <---------ARR11(3)                                    >>>>>>>>>GATA-3    --------->ARR11(3)                                    --------->AGP1 >TEIL------>ZmHOX2a(2)                                   >>>>>>>>>GATA-1 -->ARR14(2)                                              >>>>>>>>>GATA-4 <---------At4g35610 -----ARR10                                   ---------->DOF2--------->HSFB2a(2) -->GLK1(2)                                 --------->ANAC46 <---------HSFB2a(2) --ARR14(1)                                 --------->ANAC58 --------->HSFC1(1) --CCA1(2)--------->ANAC55(2)               --------->ANAC58------>ZmHOX2a(2) ============HOX2a_HOX2a                --------->ANAC58  >>>>>>>>>GATA-2 --------->At4g35610 ---ARR14(2) <---------PCF5             --------->ANAC58  --------->ARR11(3)        --------->REM1(2) ---ARR11(1)----------->HVH21 --------->AHL20(2)   <----------DOF2    ----------->HVH21    --------->GLK1(2)   taattcgatcttacgggaccgatattagagatttatatcggcgagcacgaaagctttagagatctagaaaacttgacgctgaaacgcgtagagaatcgaa  14050100                                                                                  <---------ETT(2)                                                                                  ----------->HVH21              --------->MYB46(3) ------->MYC3                                     --------->ETT(2)---       --------->ANAC58          <-------MYC3                         ----------->RAV1(1)         <--       --------->ANAC58       <---------ALFIN1                        <---------ALFIN1         <-----       ----------->GT1  --------->ANAC58                            ----------->RAV1(1)     ---------  --------->ANAC58      --------->ANAC58                           --------->REM1(1)    <------ZmHOX2a(1)  --------->ANAC58----------->HVH21                                <---------ALFIN1     =============   gactaagccaagtaaaaccactgaccaagacaacacgtttgtccgaacttgcatttgttcttacatgctgcaccacagttttagtcgacaggaagtggct  14050200                                                                        --------->LBD16                                                                    --------->ARR14(2)                                                                    <---------ARR14(2)                                                                    <---------PCF2                                                                   <------NtERF2                                                                   --------->ATERF1(1)                                                                  <---------ATERF1(1)                                                          <---------LBD16                 <------ZmHOX2a(2)                  --------->bZIP60(2)--------->ANAC58               --------->GLK1(1)                    --------->bZIP60(1)--------->ANAC46               <---------GLK1(1)                    --------->REM1(1) <------NtERF2          --------->YAB1                            <---------bZIP60(1)--------->ANAC58     --------->LBD16                              ------>NtERF2 --------->ATERF1(1)     <---------RAP2.6(3)                    --------->ARR14(2)<---------DEAR3(1)     ------>NtERF2                          <---------ARR14(2)--------->ALFIN1    --------->RAP2.6(2)                     --------->MYB52(1)<---------AtMYB61    --------------->AGL15      ------>ZmHOX2a(1)  ----------->RAV1(1) <---------LBD16    --------->ANAC46         <---------ANAC58   --------->LBD16<---------ZAT2   <---------LBD16   <----------DOF2     --------->ANAC55(1) <------NtERF2   ---------->ID1=====================HOX2a_HOX2a--------->ANAC46--------->ALFIN1 ------>ARR14(2)<---------ARR11(3)       --------->ANAC46--------->At4g35610                        - -------ARR14(2)--------->ARR11(3)  <---------ARR14(2)--------->At4g35610                  --------->At4g35610 ----ANAC46  <------ZmHOX2a(1) --------->AtLEC2--------->ANAC46--------->ZAT2              <---------At4g35610 >ALFIN1 --------->ICU4      <---------ANAC58  ------->GAMYB--------->LBD16          >>>>>>>>>>GATA-1 =======================HOX2a_HOX2a --------->ARR14(2)<---------At4g35610       <------NtERF2       <   gatttgccgcaataaggagatcactttcatttcctgcaaatacacataaccgcgacatcagccggaggtggctccgcaagtcgcctcgatttcagcagtc  14050300                     <---------ATHB12                    --------->ANAC58             <---------AtLEC2             <---------ICU4            --------->ZAT2            <---------ZAT2                                          --------------->AGL15          ---------->CDC5                             <-----------RAV1(2)        <---------At4g35610       --------->At4g35610                          --------->GLK1(2)--------->LBD16   <------ZmHOX2a(1)       <---------At4g35610                <---------ARR11(3)        ----------------->AGL1 -------->ARR11(3)  --------->ANAC58      --------->ARR11(3)       ----------------->AGL3 ---------->DOF2 ---------ARR11(3) --------->WOX13(1)    <---------GLK1(2)    --------->HSFB2a(1)--------->At4g35610   gaaatcttgagctcagcatggcaatcaattcgaagaaattccaaaatctcagaaaatcaggcgaatgtttccgaaattagggaagcagaggagaaagcgt  14050400                                                                                                 ----                                                                                                 <---                                                  <---------ARR14(2)                          <------                       --------->LBD16            --------->ARR14(2)                      ------->GAMYB                     <---------LBD16           --------->ANAC58         <---------At4g35610  <-------                    -------->P  ----------->GT1--------->ANAC46      <-------TEIL        <---------LBD16                   --------->MYB52(1)<---------ARR14(2)----------->GT1  --------->At4g35610 ---------                 <---------MYB52(2)*TSS        --------->ANAC58 --------->ANAC55(2)    <-----------GT1        --------->TOE2(3)   --------->GLK1(2)--------->At4g35610<---------ANAC55(2) --------->YAB1        --------->TOE1(3)--------->ARR14(2)<-----------RAV1(2)--------->AHL20(2)<---------AHL20(2) <---------At4g35610--------->MYB52(1)   <-----------HVH21    <-----------GT1  --------->AHL20(2)<---   ttgagcaaacccttaatgaactaaccggagactctggtgaatcggtcagacgaaaccgtgttaattacatattcatctccatttaatattaaccggctgt  14050500                         --------->LBD16                        --------->ANAC46                        --------->ANAC58                        --------->ANAC58                        <---------ANAC55(2)   <---------YAB1      <---------LBD16 ----->ZAT14         --------->ARR14(2) ------ZAT14      <---------ZAT14                        --------->ICU4 ---MYB46(3)      --------->ZAT14            ------->GAMYB ----------->GT1 --DEAR3(1)       ------------>CBF          --------->MYB46(3)                        ------------>ATHB5 >ZAT2     --------->ANAC46                --------->At4g35610<---------AHL20(2)--------->ARR14(2) ------ZAT18<---------MYB59      <---------GLK1(2)---------->DOF2            <---------ANAC55(2)    <   ggactatgcttatacctcactgcaatccgcaactagagtctcatcaacagaccaaagaaattagtaaattgccaagaacaagtatcgtccaaatattggt  14050600                    --------->ANAC46             --------------->AtSPL3                    <-------TEIL             --------------->AtSPL8                <-------TEIL           <-----------HVH21           <---------GLK1(2)                            --------->ANAC46          <---------ZAT6     ----------->RAV1(1)  --------->AtLEC2     --------->AHL20(2)   --------->ICU4   --------->ANAC58   --------->ARR14(2)             <---------AHL20(1) ---------AtLEC2    --------->ANAC58   <---------ARR14(2)             --------->AHL20(1)            <   ttgcaagaattagtgtcagtaccagcaatagcaacattgcagattgtcgaacatgcatacatatatgtataatatatatagcctatacaaaacaaatttc  14050700                                                                                              <------                                                                                              <------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                ------->GAMYB--------                                                                               --------->MYB46(3)                                                                               <---------MYB52(2)                                                                             --------->MYB52(1)                                          ------------------------>ANAC81--------->At4g35610 --------                                         <---------GLK1(1)          --------->DAG2           <-------                                  --------->GLK1(2)                --------->DAG2          ---------- ---------------AtSPL8        --------->YAB1                      ---------->DOF2--------->MYB52(1)   aagaagtacaatctaagaagaaacatatagtatgagaatatagaaatcacaaaaacaaaaacaaaacaaaaaggtagcacaacgaactgaatgaagatat  14050800       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     --------->AGP1     <---------ARR11(3)     --------->ARR11(3)     <---------ARR14(3)                    --------->ANAC58     --------->ARR14(3)                    --------->ANAC58     --------->ARR14(2)                 <------NtERF2     <---------ARR14(2)               <---------LBD16    <---------GLK1(1)                 <---------ANAC46    --------->GLK1(1)                 --------->LBD16 ---RVE1(1)                          <---------LBD16 ---CCA1(1)                      <---------DOF5.7(2)                  --------->At4g35610 ->ARR14(3)               --------->DEAR3(1)    --------->HSFB2a(1)   <---------At4g35610 --ARR14(3)             --------->ZAT18--------->LBD16                <-------GAMYB --ARR14(2)             <---------ZAT18--------->HSFB2a(2)      <---------At5g28300                -- ->ARR11(3)             --------->ZAT14------>NtERF2 --------->HSFB2a(2)         ----------->RAV1(1) ->ARR14(2)             <---------ZAT14<---------HSFB2a(2)     <-----------GT1--------->ANAC46     <- --ARR11(3)   --------->ANAC58   ---------->DOF2<---------HSFB2a(1)--------->LBD16               ---- ->ARR10      --------->ANAC58 --------->DOF5.7(2)   <---------HSFB2a(2)   --------->ARR14(2) <------ZmHOX2a(1)   tctcagagatcttgggaagcacagagcgcagtcgataacgccgggaagaaatgttccagacttatttaccgcagttgaatcccccacaaattgagaggat  14050900  Previous    Next  AGI:  At2g33110.1    Description:  ATVAMP723 (Arabidopsis thaliana vesicle-associated membrane protein 723). Identical to Vesicle-associated membrane protein 723 (VAMP723) [Arabidopsis Thaliana] (GB:Q8VY69;GB:O49322); similar to SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT2G33120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63820.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908) Range:  from: 14048115    to: 14050435    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g33120.1    Description:  SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1). Identical to Vesicle-associated membrane protein 722 (VAMP722) [Arabidopsis Thaliana] (GB:P47192;GB:O49321); similar to VAMP7B (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7B) [Arabidopsis thaliana] (TAIR:AT1G04750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68808.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908) Range:  from: 14050546    to: 14052620    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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