Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->ANAC58    --------->ANAC55(1)    <---------O2    --------->ANAC55(2)    --------->ANAC46 -------HVH21 -------TGA1 -ANAC55(2) >ANAC46                                                                     <---------ANAC58 >TGA1a                                                                  ---------->DOF2 -O2--------->O2                                                        <---------AHL20(2)  --------- -TGA1a                                                                --------->AHL20(2)   <-------- >bZIP60(1)        <-----------GT1                                   ------>MYB46(1)        --------- >O2--------->ANAC58                                                 ------>MYB83           --------- >ANAC55(2)     <----------DOF2                            <---------ATHB12  <---------ANAC58  ------ -bZIP60(1) <-----------GT1                       <----------DOF2  <---------MYB59     --------->YAB1   tcatacacgtcttgtttccttttacatttttgagttttgaccatgacttcttctttctccaatctataaccaaattaatgcgagttgtttcataacgcaa  14028500                                                               --------->ATHB12                                                               -------->ATHB1                                                               --------->ATHB51                                                               <---------ICU4                                                              --------->ICU4                                                              <---------YAB1                                                              <---------ATHB51                                                            --------->YAB1                                                            <---------ICU4                                                           --------->AHL20(2)                                                           <---------AHL20(2)                                                     -------->P-------->HAHB4                                                     ------>MYB83                                                    --------->MYB55(1)                         ------                                                   --------->DEAR3(1)                          ------                                                   --------->MYB46(3)                          <-----      --------->YAB1                               --------->AtMYB61                --------->AHL20(2)     <---------YAB1    <---------AHL20(2)          <---------MYB111(2)              <---------AHL20(2)   --------->YAB1  --------->AHL20(2)              <---------MYB46(2)              --------->AHL20(2) >ANAC58 --------->AHL20(2)                        <---------MYB111(1)             --------->AHL20(1) -ANAC55(2)  --------->YAB1                        <---------MYB55(2)      <---------ALFIN1   <------ >ANAC46 <---------AHL20(2) --------->ARR11(3)    --------->MYB46(3)    --------->PCF2   <-----------GT1 >ANAC58<---------YAB1 --------->AHL20(2)       <-----------GT1<---------AHL20(2)  <---------AHL20(1) ----->RAV1(1)     <---------AHL20(2) ----------->GT1------>MYB46(1)---------->DOF2<---------AHL20(2)   catactcataataaatgaaaattaaaaaaatatcaagagaaggtaacatttcaccaacctattaattattgaaaggcccacttaatttatttttctgtat  14028600                                            --------->TGA2(2)                                           <-----------TGA1                                          --------->ANAC58                                          --------->TGA2(1)                                          <---------ANAC55(2)                                          <---------ANAC58                                          --------->ANAC58                                          <---------TGA2(1)                                          --------->ANAC55(2)                                          <---------bZIP60(1)                                          --------->bZIP60(1)                                  <---------ICU4                         <---------GLK1(2)<---------ANAC58                        <------------CBF           <---------ARR11(3)    <---------YAB1             <-------TEIL     ----------->GT1 --->ARR14(2)         --------->YAB1   <---------MYB52(1)<---------ANAC58 --------->YAB1         <--- ->TEIL  ----------->ARR10       --------->ICU4          <---------ANAC58<---------ATHB12        ---- ----ARR14(2)     --------->AHL20(2) <---------ICU4     <-------TEIL ------------>CBF      <---------ZAT6 ---CCA1(2)--------->ARR11(3)  --------->YAB1    <---------AHL20(2)  ------>ZmHOX2a(2)   <---------ANAC46   ctgtaaacaataagatactattaaacagaattgtcatcatcgttacgtcatattaatgtgcgttcatttgatccaatgagagtaaattgctgagtgttga  14028700                                                                                   <-----------GT1                                                                           <-------MYC2                                                                           <-------MYC3                                                                           ------->PIF5                                                                           ------->MYC4                                                                           <-------MYC4                                     <---------WRKY12                      ------->MYC3                                     <---------WRKY38(1)                   <-------PIF5                                  ==================================================MYC_MYB                               <-----------GT1                             ------->MYC2           --------------->AGL15  ------->GAMYB                           <---------O2           <---------------AGL15 --------->ZAT6                           --------->O2     <-----------RAV1(1)      <-----------GT1                             --------->PIF3(3)  ------>ZmHOX2a(1)          <---------AHL20(2)                           --------->TGA1a ------GLK1(1)              --------->YAB1            <-----------TBP     <---------PIF3(3) ----->GLK1(1)         ------------>CBF  --------->YAB1                   <---------TGA1a           -   tttcctcttgttgctaaattttgaagccaattttaacagtcaactataactcccagttatatagtcagagatgtccacgtggaatttacttcatgaacaa  14028800                             <-----------GT1                           <---------AHL20(2)              --------->YAB1                           --------->AHL20(2)            --------->AHL20(2)                    ----------->HVH21                 <---------ANAC46                   ------->MYC3                      --------->At4g35610                  --------->O2                      ------>NtERF2                  --------->ANAC55(2)              <---------DEAR3(1)                  <---------ANAC55(2)              <---------RAP2.6(2)        <---------ARR11(1)                  --------->TGA1a                  <---------RAP2.3(3)        --------->ARR11(3)                  --------->ANAC46                 <---------RAP2.3(2)        --------->GLK1(2)                  <---------TGA1a               --------->DAG2                <---------ARR14(2)                  <---------O2                ---------->DOF2                 --------->ARR14(2)                  =======================================bZIP_DOF             <---------ARR11(3)                <-----------GT1   ----------->RAV1(1)<------NtERF2           <---------CCA1(2)              <-----------HVH21   <---------ALFIN1--------->RAP2.6(3)        <---------ARR14(1)   <---------ANAC46<-------MYC3--------->ANAC46---------->DOF2      --------->AHL20(2)      <-------- ---------->HVH21 =======================================bZIP_DOF   ----------->TBP        <---------   atgtgactcgtagacatttcacgtgacatttaaaccccacatatttagtaaaggcggcttaaaataacatatatatagcaaatctttgatatgtcttttt  14028900        <--------ATHB1        --------->AHL20(2)        <---------ICU4        --------->WOX13(1)        --------->YAB1      ------------>CBF                               <---------ZAT14        --------->ATHB51 <---------MYB46(3)                              --------->ZAT6       <---------ATHB12  <------MYB83                         --------->ANAC58   ------------>CBF      <------MYB46(1)      <---------ANAC58--------->ANAC58   <-------TEIL------>ZmHOX2a(1)              <---------ANAC58--------->ANAC46 --DOF2<---------ATHB51<--------P--------->YAB1             <---------ANAC58 --------AGL3 --------->TOE2(3) <---------ATHB12            <---------ANAC58      --------->ARR14(2)   ttgggttcaataatttcctcaacttgttggttcaatcacaaacaccatgcgtttgcatttttgctcgctactcttactctactgtatcgtcttcgtttca  14029000                                                                                           --------->ZAT14                                                                                           <---------ZAT14                                                                                          ------->GAMYB                                                                                     <---------At4g35610                                                                                     <------NtERF2                                                                                     --------->At4g35610                                                                                  --------->At4g35610                                              <---------ARR11(3)                  <---------At4g35610                                        <------ZmHOX2a(2)                        <---------RAP2.3(1)                      <---------ANAC58 <---------ARR11(3)                        ------>NtERF2                      <---------ANAC58 <-----------ARR10                        <---------RAP2.3(3)                      <---------ANAC46 --------->AGP1                           <---------RAP2.3(2)           --------->At1g77200         --------->ARR14(2)                       --------->ATERF1(2)           ------->GAMYB               <---------ARR14(2)                       <---------ATERF1(2)           --------->DEAR3(1)   ===============HOX2a_HOX2a                     --------->RAP2.6(3)           ----------->HVH21    ------>ZmHOX2a(1)                             --------->MYB52(1)          --------->DEAR3(2)    ----------->HVH21                          <---------At4g35610          --------->MYB46(3)  ----------->RAV1(2)                         ------->TEIL   --------->MYB46(3)       --------->ETT(2)   ---------->ID1--------->CCA1(2)      --------->YAB1----------->HVH21-------   agcttcttgacgaccgacgctcttgcttgtcttcctgaccagatccaagctctaatccaattcaagaatgagtttgaatctgacggctgcaaccgcagtg  14029100                                                    <---------ZAT2                                                    --------->ZAT2                                          --------->ANAC58           <---------ZAT14                                          --------->ANAC58          <----------DOF2                           --------->ANAC46   <---------HSFC1(2)   <---------ANAC58                           --------->ANAC58   --------->HSFC1(2)   <---------ANAC58                           --------->ANAC58  ------->TEIL       <--------P               --------->MYB52(1)                         --------->ZAT6   --------->ANAC46    <---------MYB46(3)         ------>MYB46(1)             <---------ZAT14          <-----------HVH21      --------->ALFIN1            ------>MYB83             --------->ZAT18       <---------ZAT18  --------->At4g35610              >>>>>>>>>>MYB80 -->At5g28300--------->ZAT14   <-----------RAV1(1)  <---------At4g35610      <---------GLK1(1)   actacttaaacggagtccagtgtgataacacgactggtgcggtcacgaagcttcagctcccaagtggttgcttcactggaactctcaaaccaaacagtag  14029200                         --------->TOE2(3)                         --------->TOE1(3)                     <---------MYB52(1)                     --------->DOF5.7(2)               --------->At4g35610               <---------At4g35610                        --------->ZAT14               --------->ZAT2                             <---------ZAT14            <---------At4g35610                        ------>ZmHOX2a(1)                       <----- <----------DOF2  <-------TEIL            --------->MYB46(3)                 <---------At4g35610   tctctttgagttgcatcagcttcgttaccttaatctctctcacaacaacttcacttcctcttcactcccttctgaattcagcaatctcaccagattagag  14029300                                                        <---------CCA1(2)                                                      --------->TOE1(3)                                                      <---------DAG2                                          ------>ZmHOX2a(1)                            --------->YAB1                                         --------------->AGL15                         <---------ICU4                                         <---------------AGL15                        --------->ICU4                                         --------->TOE2(3)                 <-----------GT1          <                                        ----------------->AGL2            <-----------GT1     -------                                        ----------------->AGL3           --------->AHL20(2)   <------                                        <-----------------AGL3 <---------ANAC58     <---------------AGL15                                        ============================================================MADS_MADS      <---------ANAC58            <---------ARR11(3)  --------->TOE2(3)  <---------AHL20(2) ---------      <---------ANAC58       --------->WRKY18(1)   <-----------GT1-------->P  <---------DAG2<-------- ----TOE2(3)         <----------DOF2    ----------------->AGL1 <---------ANAC58     --------------->AGL15   gttttgtctcttgcctctagtagctttactggtcaagttccttcctcaattagtaaccttatcttgcttacccatttaaacctttcccataatgagctca  14029400  Previous    Next  AGI:  At2g33050.1    Description:  leucine-rich repeat family protein. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G33020.1); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G33060.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT2G32680.1); similar to putative LRR family protein [Brassica napus] (GB:ABI99471.1); similar to putative disease resistance/LRR family protein [Brassica napus] (GB:ABR92699.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 14028947    to: 14031475    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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