Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         ==============HOX2a_HOX2a                                                <------ZmHOX2a(1)                                            <------MYB83                                            <------MYB46(1)                                           --------->MYB111(2)                                          <--------P   <------ZmHOX2a(2)                      <------                                         <-------GAMYB<---------ARR14(2)                   <---------ANAC46               --------->ARR14(2)       --------->MYB55(2)            <---------YAB1       <---------ANAC58         --------->ANAC46               <---------MYB46(3)      <---------YAB1     ----------->GT1    <-----------HVH21                  <---------AtMYB61      <------ZmHOX2a(1)   ----------->GT1----    <---------SPL7                   <----------DOF2  --------->ARR14(2)    <---------LBD16<---------ANAC58   <---------DEAR3(2)          <---------DEAR3(1) <---------LBD16 --------->ARR11(3)     <-----------GT1 -WOX13(1)     <---------ARR14(2)<------NtERF2  ==============HOX2a_HOX2a----------->HVH21<----------   atggacggtccgagccaaatccgagtgttttagtcggggctttggttggaggaccggatcaccaggatgattttgatgaccggaggggtaattacgttca  14012800              <-------TEIL            --------->ALFIN1          <---------------AtSPL8  <---------DEAR3(2)                                             <---          --------------->AtSPL3  <------MYB83                                                   <---          --------------->AtSPL8  <------MYB46(1)                                                <---          ------->TEIL           <---------MYB46(3)                                             <----      <---------------AtSPL3     <---------DEAR3(1)                                             <----     <---------ANAC58            <---------DEAR4(1)                                         ---------     <---------ANAC58            <---------DREB2C(2)      <---------ANAC58                  <--------     <---------ANAC46           <---------ORA47(1)        <---------ANAC58                  <-------- -TEIL<---------------AtSPL8 <---------AtMYB61          --------->ARR11(3)                  --------- ----->MYB52(1)       <---------At4g35610   <---------ANAC58     ----------->GT1>>>>>>>>>TBF1   <---- -------------TaNAC69(2)   <----------DOF2  <---------ANAC58    <------ZmHOX2a(1)      --------->CCA1(2)   aacggaggcttgtacgtacaatactgctcctttggtcggtgtgtttgcgagacttatagagcttgaggagcaaaaacttgaagaagaagatgtgagcttg  14012900 ------ANAC58 ----GAMYB ------ANAC58                       --------------->AGL15 -----MYB46(3)                      <---------------AGL15 --MYB83                      <---------ICU4 >ZAT2                       <---------ATHB12 -At4g35610               --------->AHL20(2)                          --------->ANAC58 -ZAT2  <---------YAB1    <---------AHL20(2)             ----------------------->TaNAC69(2) >At4g35610              --------->AHL20(2)  ---------->DOF2          --------->ANAC58 --MYB46(1)           <---------AHL20(2) ---------->DOF2----------->GT1      <-----------GT1   gttgcaacttataagagatagtttttatttaatcaatacaaaaaaaagaaagaaaatgtggttttattttgcacccattttgccatttctatattgttag  14013000                                                                          <---------ARR11(3)                                                                          --------->ARR11(3)                                                                    <---------YAB1                                                                 <---------YAB1                                                                <-----------GT1                                          --------->DAG2       --------->YAB1          <---------AHL20(2)                                         ---------->DOF2      --------->ICU4           --------->AHL20(1)             <----------DOF2          --------->AHL20(2)      <---------ATHB12         --------->AHL20(2)             <---------DAG2       <---------AHL20(2)        --------->WOX13(1)        --------->AHL20(2)  <-----------GT1                 --------->AHL20(2)--------->AHL20(2)    <---------GLK1(2)   agtttttcttctcaactttttttttttgttttgtttttaaataaaaagtgtgtataaaatatcaattatcaatatagatttttgtcaattttattagtta  14013100                                                                                   <---------ANAC58                                                                 <---------RAP2.6(3)                                                                <---------ANAC46   <---------ANAC46                                                              ------>NtERF2        <---------ANAC58                                                        <---------At5g28300    <------------CBF                  <----------DOF2                       <-----------GT1      <---------AHL20(2)        --------->HSFB2a(1)                         <---------ICU4<---------MYB52(1)      --------->ANAC46       --------->SPL7                          -------->P  ----------->RAV1(2)--------->ATHB12     <---------SPL7                    --------->ZAT14 <-----------GT1       --------->AHL20(2)   ---   agaagttcgaacggtctcttctttttgcctctgttttgcagtttacacttaccatttttacccctgccgtttttgtggattaattgcgttatacgacgtc  14013200                                                                                                    <                                                                                           ----------                                                                                           ----------                                     <---------GLK1(2)                     ---------->DOF2 <---------                                   --------->ANAC58                    ---------->DOF2     <---------            *TSS               --------->ANAC58                  --------->HSFB2a(2)     --------->LBD16           --------->ANAC46    --------->ANAC46                  <---------HSFB2a(2)     ------>NtERF2      <----------DOF2          --------->ANAC58                 <---------LBD16         --------->ANAC58 --->ZmHOX2a(1)   --------->ANAC46 --------->ANAC58           --------->GLK1(2)         --------->ANAC58   ctcttacactttcactccaaacgacgctgttttaagcaagaaactccatcgtcttcttggcaaaattctggatgaaagaaagtagaagtcccgcccaaat  14013300                                              <-----------ARR10                                              <---------ARR14(2)                     ------->GAMYB            --------->GLK1(2)                   ------>MYB83               --------->ARR14(2)           <----------DOF2       <---------At4g35610          <---------DAG2        <---------ARR14(2)       <---------ALFIN1         --------->ARR14(2)   <----------CDC5 ----------ID1     ------>MYB46(1)           <---------GLK1(2) ------->AGL1     --------->MYB52(1)  <---------WOX13(1)                                        <---- ------->AGL2    --------->MYB46(3) --------->ATHB12--------->At4g35610                    --------->TOE2(3) --------AGL1    --------->AtMYB61 <---------YAB1 --------->ZAT18                  <----------DOF2 --------AGL2   --------->MYB46(3)------>ZmHOX2a(2) <---------At4g35610   >>>>>>>>>TBF1 <-----------GT1   tggggacgaacacctttcaccaacggcgaaggctgatctgattgatagaatctgcgctgaacttggagtatgtgaagaagaagcactttgttaccttgat  14013400                                                                   ----------->HVH21                                                                --------->SPL7                                                              ------>NtERF2                                                              <---------SPL7                                            ------>MYB83      <-----------HVH21                                            ------>MYB46(1)  --------->RAP2.3(2)                                          --------->AtMYB61  --------->DEAR3(1)             ---------                                          ------->GAMYB      --------->RAP2.6(2)          <---------DOF5.7(2)                                          <---------MYB59   --------->ATERF1(1)          <---------WRKY38(1)                                         --------->MYB46(3) --------->RAP2.3(1)         ----------->HVH21                                        --------->ANAC58    --------->ORA47(2)        --------->LBD16                                     ------>NtERF2         --------->LBD16           <---------DEAR3(1)                                    --------->ANAC46       ------>NtERF2            <---------LBD16                               <---------ANAC58           --------->ANAC46         ------>NtERF2                       <-------GAMYB--------->RAP2.6(2)<---------ARR14(2)         --------->ANAC46  <                      <---------DEAR3(1)--------->ANAC58 <---------LBD16     ------->TEIL<---------WRKY12                   <---------DEAR3(1)--------->LBD16   --------->ARR14(2)    <-----------ARR10------- -----WOX13(1)<---------YAB1   <---------ANAC58       <---------MYB52(1)--------->At4g35610 ---------   ggattccactgggattttgattcggcgttggaggcttgccgcaaccaaacctctccgtttccgccgtccctcacagttgaatctacgccggtgaacgcta  14013500         --------->WRKY38(1)       <-------GAMYB              ------>ZmHOX2a(1)      <---------ANAC46         <------ZmHOX2a(2)      <---------MYB46(3)      <---------ARR14(2)     <------NtERF2            --------->ARR14(2)    <-----------HVH21       ------>ZmHOX2a(2)                 --------->MYB46(3)   --------->ANAC46      -------->HAHB4                --------->LBD16  --------->LBD16       --------->ICU4               <---------LBD16  ------>NtERF2         <---------YAB1             --------->ANAC46                   --------->ANAC58 >ANAC58 ----------->HVH21  =============HOX2a_HOX2a--------->LBD16                  <---------TOE1(2) ---------LBD16        <---------TOE2(3)        <---------ARR14(2)                   <---------TOE2(2) -->DOF5.7(2)         --------->YAB1 <---------LBD16------>NtERF2          ---------->DOF2          < >ANAC58 --------->WRKY12--------->ATHB12       --------->ARR14(2) <---------HSFB2a(2)--------->ANAC58   actccgcgtcgttgacaactccattaatgatcgatcctcttcggagttggaatccgccggatgaacaatcgagaaatgaaagtatcgcacgattttgcta  14013600                             ------->PIF4                                                     <------                             ------->PIF5                                        <---------ANAC46                --------->ZAT14                                                  <---------ANAC58     <---------ANAC58        ------->MYC3                                ------------>AtMYB77 <------     <---------ANAC46        <-------PIF4                               <---------ETT(2)      <------     <---------ANAC58        <-------MYC3                               ----------->HVH21     -------    --------->At4g35610      <-------PIF5                               --------->ETT(2)     <------NtERF2   --------->MYB55(2)        ------->MYC2                              <------NtERF2    -------------   <---------MYB46(3)       --------->ANAC58                          <---------ATERF1(1)   ---------  <--------P    <---------ZAT14    -------->P                        --------->DEAR3(1)--------->ETT(2) <-------GAMYB <---------ZAT6<-------MYC2     --------->ANAC58    ------>MYB46(1)<---------ANAC58 ---------MYB46(3)          --------->ANAC58  --------->ANAC58    ------>MYB83<---------GLK1(2) -----   cgcggttgctggagttagtgtagaagaggcacgcgcttacctcgagcgaagcaattggaatataaacctagccgtcgacagtttcttggtcgagcgccgt  14013700  Previous    Next  AGI:  At2g32990.1    Description:  ATGH9B8 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B8); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Endoglucanase 11 precursor [Arabidopsis Thaliana] (GB:O48766); similar to ATGH9C2 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9C2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G64390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38906.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24052.1); similar to Endoglucanase 7 precursor (Endo-1,4-beta glucanase 7) (OsGLU10) (GB:Q6Z5P2); contains InterPro domain Six-hairpin glycosidase-like; (InterPro:IPR008928); contains InterPro Range:  from: 14010327    to: 14013094    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g33000.1    Description:  ubiquitin-associated (UBA)/TS-N domain-containing protein-related. similar to ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G33010.1); contains InterPro domain UBA-like (InterPro:IPR009060) Range:  from: 14013212    to: 14015612    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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