Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                            <--------                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)                     ================================================================================                     --------------->AGL15                                      --------->AHL20(2)                     <---------------AGL15                                      <---------AHL20(2)                 --------->ICU4                                               --------->AHL20(2)   --         <---------MYB46(3)                               <---------AHL20(2)  <---------AHL20(2)   <-      <---------MYB46(3)                               ----------->GT1      --------->AHL20(2)    ---     ------>ZmHOX2a(2)                            --------->WRKY38(1)  <-------TEIL    --------->AHL20(2)   tgttcgatcggttgatggaattactacaacgagaaacaacaatttgattttgttgactagttaaattctaatatacatatatatatatataaaattatat  13994400                                                                                              -------                                                                                              -------                  <---------MYB52(1)                                              <---------ARR11(3)         <----------DOF2                                          <---------ANAC55(2)         -------         <---------DAG2                                           --------->ANAC55(2)       --------- >AHL20(2)      --------->ETT(1)    <-----------GT1         --------->AHL20(2)    --------->ARR11(3) -AHL20(2)     ---------->ID1      --------->AHL20(2)       <---------AHL20(2)   <---------CCA1(2) ==============MADS_MADS    ------>MYB46(1)       <---------ARR11(3)           --------->CCA1(2) ------------->AGL15        ------>MYB83  --------->YAB1<---------YAB1        <---------ARR11(3) --------------AGL15       ----------->RAV1(1)    --------->ARR11(3)<---------CCA1(2)     <---------- -------------->AGL2   <-----------GT1 --------->YAB1 ----------->GT1         --------->ARR11(3)   <-   accaatattagctttttgtcggtatttaccaacacaattaactataacaatagatattgtaataaatcacatatcatatagatatatcttattaacacga  13994500                                                                              ----------->GT1                                                                             --------->ALFIN1                                                                           <---------ANAC58                                                                           <---------ANAC46                                                                     <----------DOF2                                                                    <---------------AGL15                                                                    --------------->AGL15                                                                   ----------------->AG       <---------ICU4                                              ----------------->AGL1     <---------ARR11(3)                                           ---------->ID1 -->ANAC58                                                   --------->AHL20(1) -->ANAC46                                                   <---------ARR11(3)    --------->AHL20(1) -->ANAC58                                                   --------->ARR11(3)    <---------AHL20(1) >ZAT6<---------YAB1--------->AHL20(2)    <---------YAB1--------->AHL20(2) <---------ANAC58 -GT1--------->ARR11(3)                <---------AHL20(2)    <---------AHL20(1)    <---------ARR11(3) --------ANAC55(2)--------->YAB1 --------->YAB1  <-----------GT1 <-----------GT1   --------->ARR11(3)   tatgtaagataattgctctaaaataaaaacttctatagtagtttatttttgtcaccaattgaatatttttccttttggggtggaaaatatttgtggtatc  13994600                          --------->ANAC46                          <---------ALFIN1                         <---------MYB55(2)                         --------->MYB46(3)                       --------->ANAC46                      <---------MYB55(2)                      <-----------GT1                      --------->MYB46(3)                   <---------ARR14(2)                      --------->DEAR3(1)                   --------->ARR14(2)             --------->AHL20(1)                     <---------ALFIN1                   --------->RAP2.6(2)               <---------AHL20(2)                     --------->ANAC58              ---------->DOF2                        <---------AHL20(1)                     --------->ANAC46          --------->AHL20(2)                        --------->AHL20(2)                     --------->ANAC58          <---------AHL20(2)                        --------->YAB1                   <---------ALFIN1           <---------AHL20(1)                        <---------YAB1               ------->TEIL------>NtERF2      <---------AHL20(2)                     <---------AHL20(2)               --------->ARR14(2)             --------->AHL20(1)   <----------DOF2   <---------YAB1               <---------ARR14(2)             --------->AHL20(2)<-----------GT1     --------->AHL20(2)              <---------CCA1(2)         ------>ZmHOX2a(1)<---------RAP2.6(3)      --------->ICU4<----   tcaataagcttcttgtgtatcccaccccccaccatggcattcctacaatttaataaagccgtattttcactttcactctgagtcatttttattatattgt  13994700                                                                                  --------->DAG2                                                                             --------->AHL20(2)                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                                                                       --------->AHL20(2)                                                                       <---------AHL20(1)                                                                       <---------AHL20(2)           -                                 <---------AHL20(1)                 --------->AHL20(2)   <---------WOX13(1)                              --------->AHL20(2)                    <---------AHL20(2)  <------------CBF                          --------->ZAT18                  <-----------RAV1(1)   ---------->DOF2    -                          <---------ZAT18                  <---------MYB46(3)<---------AHL20(2) -----                    <<<<<<<<<RAP2.2              ---------->DOF2   --------->AHL20(2)  --------->ATHB12                   <---------YAB1--------->ARR11(3)      <------------CBF   <---------AHL20(2)  ----- -----YAB1         <---------TOE2(3)   ----------->TGA1  <---------GLK1(2)  --------->AHL20(2)  -----   cattttcgacaaaatcgaatttagattgtgcattatatattctgacgaaaacaaagaaagattgttgcattaatttaatttaaaaaagttgattgaaaac  13994800                                                                      ----------->RAV1(1)           <---------At4g35610                                     ------->GAMYB -------->ANAC58                                                  --------->MYB46(3)               <- -------->ANAC58                                         ---------->DOF2 ----------->RAV1(1)       <- ---->ANAC58                   ---------->ID1 <----------DOF2   ----------->RAV1(1)                <- ---->ANAC46               <----------DOF2  *TSS       <---------HSFB2a(2)    <---------TOE2(2)    <- ---->ANAC58    ------>ZmHOX2a(1)<----------DOF2       --------->HSFB2a(2)  --------->TOE2(2)      <-   gcaagtctcgttcatctcctccaaatgttctttttctttttttatgttctttctcttctaaaagtccaacagcgacaacataggtttctctctctaccat  13994900            --------->ANAC58            --------->ANAC58                                                                     ----           --------->DAG2                                                                       <----          ---------->DOF2                                                                      <-----     <---------------AGL15                                                              =============     --------------->AGL15        ------->GAMYB                                         ------>ZmHOX2a(2)    ----------------->AGL3       --------->MYB46(3)                                    ==============    <-----------------AGL3     --------->MYB52(1)                                      <------ZmHOX2a(2)    ----------------->AGL2     <---------ICU4                                          --------->GLK1(1) --------bZIP60(2)          --------->YAB1                                             <---------GLK1(1) --------ANAC58            <-------TEIL                                               <---------ARR11(3) --------ANAC55(1)      <---------DEAR3(2)                        --------->ANAC46    --------->ARR11(3) --------ANAC46       <------NtERF2  --------->AtMYB61            --------->ANAC58    <---------AGP1 --------ANAC58     <---------DEAR3(1)       <---------MYB52(1)   --------->ANAC58--------->CCA1(2)   ggcgtgtctatataaagcaaggtcgtcgattcataacgaccatctccattacttctccataacctttcaagaaacaaaaacaagataagatctcttcaga  13995000           --------->MYB46(3)         ----------->RAV1(1)     --------->ANAC58     --------->ANAC46     --------->ANAC58   <---------ALFIN1  --------->ZAT14 ------>ZmHOX2a(1) ----->GLK1(2) -----GLK1(2)                     <----------DOF2 ----At4g35610 --------->YAB1  --------->GLK1(2)           <---------WOX13(1) =======HOX2a_HOX2a           <---------GLK1(2)          --------->ATHB12                 <------ZmHOX2a(1) =======HOX2a_HOX2a    <-------TEIL                  ------->TEIL               ------->TEIL        <   ttcctacactccaacaaatataagtttcattagattctttcttagctagagaatgaaactgattgagaagacgatgagcatgaaccagtttaggactatg  13995100                                                                                       --------->At4g35610                                                                                    <---------At4g35610                                                                                    --------->ATERF1(1)                                                                                    --------->At4g35610                                                                                    <---------ZAT2                                                                                    <------NtERF2                                                                                   ------>NtERF2                                                                                   <---------DEAR3(2)                                                                                   <---------ATERF1(1)                                                                                  --------->ATERF1(2)                                                                                  <---------ATERF1(2)                                                                                  --------->RAP2.3(3)                                                                                  --------->DEAR3(1)                                                                                  <---------DEAR3(1)                                                                                 <------NtERF2                                                                                 --------->ATERF1(1)                                                                                 --------->RAP2.3(1)                                                                                 --------->ORA47(2)                                                                                 --------->DEAR4(2)                                                                                 <---------LBD16                                                                                --------->ABI4(1)                                                                                <---------RAP2.3(1)                                                                                ------>NtERF2                                                                                <---------ATERF1(1)                                                                               --------->RRTF1(2)                                                                               --------->RAP2.3(2)                                                                               --------->RRTF1(3)                                                                               --------->RAP2.3(3)                                                                               --------->ATERF1(2)                                                                               <---------DEAR3(1)                                                                               --------->DEAR3(1)                                                                               <---------ATERF1(2)                                                                              --------->RRTF1(1)                                                                              --------->ATERF1(1)                                                                              --------->RAP2.6(1)                                                                              <------NtERF2                                                                              --------->DEAR4(2)                                                                              --------->ERF1                                                                             ------>NtERF2                                                                             <---------DEAR4(2)                                                                             <---------ATERF1(1)                                                                             <---------RAP2.3(1)                                                                             --------->At4g35610                                                                             --------->DREB2C(1)                                                                            ------->GAMYB                                                                            --------->RAP2.6(2)                                                                            --------->ANAC46                                                                            --------->RAP2.3(3)                                                                            --------->RAP2.3(2)                                                                            --------->ATERF1(2)                                                                            <---------ATERF1(2)                                                                            --------->DEAR3(1)                                                                           --------->RAP2.3(1)                                                                           --------->ERF1                                                                           --------->ATERF1(1)                                                                           --------->MYB46(3)                                                                           --------->DEAR3(2)                                                        <---------LBD16   <---------ZAT2                   ----------------------->TaNAC69(2) <---------WRKY18(1) --------->ZAT2                  <---------MYB46(3)                 --------->WRKY12     <---------ATERF1(1)                 --------->ALFIN1                    --------->WRKY38(1)  <---------At4g35610                 <---------AtMYB61               <---------TOE2(3)  <-----------HVH21  <---------At4g35610              <---------DEAR3(1)                ---------->DOF2   <-------MYC3--------->ORA47(2)<----       --------->ANAC58  <---------DAG2      <---------At4g35610  ------->MYC3--------->RAP2.3(1)<---       --------->ANAC58  <----------DOF2     --------->At4g35610 --------->O2<---------DREB2C(1)<----   <------ZmHOX2a(1)   <---------At4g35610 <--------P----------->HVH21  <-----------RAV1(2)  -------- ------ZmHOX2a(1)<---------DEAR3(1)     <---------TOE2(3) --------->LBD16 --------->At4g35610<-------   gaggaggagaagcaagacggtggtgagcttttccataccatcgaggtagctaaagttgaccggaacaacgtgtctcagccgccgccggctgctactgcag  13995200                                                                                               <-----                                                                                             <-------                                                                                   <---------GLK1(1)              --------->LBD16                                         --------->KAN4(2)   <---------ARR14(2)         <---------ARR14(2)                                          --------->KAN4(1)    --------->ARR14(2)        <---------HSFC1(2)                                           <---------KAN4(1)--------->HSFB2a(2)        --------->HSFB2a(1)                                          <----------TaMYB80--------->LBD16   <---------HSFB2a(2)                    --------->WRKY12          <---------KAN4(2) <---------LBD16   --------->HSFB2a(2)                  <-------GAMYB            ----------->GT1   --------->GLK1(1) -----At4g35610       ------->TEIL      --------------------->WRI1  ---------->TaMYB80<---------HSFB2a(2) ------ALFIN1--------->LBD16   ------>MYB83            <---------MYB46(3)         --------->ARR14(2) -----ZAT14 <---------LBD16    ------>MYB46(1)        <---------AtMYB61  <---------LBD16--------->LBD16 ->ZAT14<---------HSFB2a(1)  <---------MYB59   <----------DOF2--------->YAB1      <---------GLK1(2) --ZAT14--------->HSFC1(2)   --------->TOE2(3) <---------DAG2<---------ATHB51     <---------ARR14(2)   cactgctagaagttcccggtgatgaacttaacctaattccaccgttgaacttttcgatggtcgataatggtatattccggtctggattcccggactcggc  13995300  Previous    Next  AGI:  At2g32960.1    Description:  tyrosine specific protein phosphatase family protein. similar to tyrosine specific protein phosphatase family protein [Arabidopsis thaliana] (TAIR:AT1G05000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24065.1); contains InterPro domain Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); contains InterPro domain Protein-tyrosine phosphatase; (InterPro:IPR000387) Range:  from: 13994844    to: 13998053    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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