Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    ---------->DOF2        <---------ARR14(2)        --------->ARR11(3)        <-----------ARR10        <---------ARR11(1)                                                                     <-----        <---------ARR11(3)                                                      --------->ANAC58   >>        --------->ARR14(2)         --------->ANAC58                             --------->ANAC58   >>       <---------CCA1(2)           --------->ANAC58                          <---------ATHB12 -------   <---------ARR11(3)            ---------->DOF2    --------->TOE2(3) <-----------GT1    ---------->DOF2   <-----------HVH21       --------->ANAC46    --------->CCA1(2)   --------->YAB1     <------ZmHOX2a(1)   gacaaggtcatatcttccttcaaagttatactgaacaaagccatagaagataaacatcaaaatttccaattttaactaaatcaagacaggacaaagagga  13932000                             <---------ZAT18                           ------->MYC3                           ------->MYC2                           <-------MYC3                             <---------ALFIN1                           <-------MYC2                         <---------At4g35610                          <---------ANAC58                      --------->ZAT2        ----------->RAV1(2)<-------PIF5                         --------->At4g35610       -------->P         <---------ANAC58                  <-----------HVH21 -ZmHOX2a(1)             <-------TEIL                      --------->bZIP60(2) >>>>>>>SARD1           <------------OsbHLH66            <---------ALFIN1         <----------DOF2 >>>>>>>CBP60g  <----------DOF2                       <-----------GT1        <-----------GT1        - ---->GT1 ----------->HVH21------->PIF5            --------------->AtSPL8  <----------DOF2    <------ZmHOX2a(2)   aatttggctaacctgaccctttacaggctcgtgcccattccaaaacacataagtttgaaccacatcagctccaccttctttactctttgcgatgagatca  13932100                                                                                    ---------->DOF2                                                                                  ----------->HVH21                                                                                <---------DEAR3(2)                                                                                <------MYB83                                                                                <------MYB46(1)                                                                               <---------MYB46(3)                                                                               --------->MYB46(2)                                                                               <---------DEAR4(1)                                                                               <---------DEAR3(1)                    <---------TOE2(3)                                          <---------DREB2C(2)                   <-----------GT1                                            <---------ORA47(1)               --------->WOX13(1)                                          <---------AtMYB61           <-----------GT1                                                 <---------TOE2(3)    --------->At4g35610                                                    <---------TOE1(3)        <    <---------At4g35610                                                <---------At4g35610        --- -------->AtMYB61<---------ATHB12      --------->YAB1                  --------->At4g35610     <-----   gaccacatctgaataaccaattaacaatgccaattcttctatcagcatttcatcaaaaaatcaaaaattgttgagctaaggtcggtgaaagagattgtta  13932200                                                                 ---------->DOF2                                                               <---------YAB1                                                            <---------YAB1                                                        <------NtERF2                                                       --------->LBD16                                                       ------>NtERF2         <---------ANAC58                             <---------DEAR3(1)         <---------ANAC46    <---------ZAT2           <---------ATERF1(2)           <---------ZAT18         <---------ANAC58    ----------->RAV1(2)      --------->ATERF1(2)         <---------At4g35610      --------->ALFIN1       <---------At4g35610     <---------LBD16              --------->At4g35610    --------->ALFIN1         --------->At4g35610     <---------ANAC58   --------->LBD16   <------ZmHOX2a(1)         --------->ZAT2  ------->TEIL<---------DEAR3(1)       --------->ZAT2 -----------RAV1(2)        <-----------RAV1(2)       <---------ANAC58 <---------LBD16 ------>TOE2(3)        --------->GLK1(1)    --------->ANAC46--------->ICU4----------->HVH21         - ------GT1        ----------->GT1         <---------ATERF1(1)--------->ATHB12 ------>ZmHOX2a(2)------   cctcaggagtggctcgagggtagtgaattccagctgagacgagcatgcgcctcttgccggcgatgattaaagcccggtgatcgtagctcacattgaacgg  13932300                   --------->ARR14(2)              <-----------------AG             ------>NtERF2   <-------TEIL             ----------->RAV1(1)                                        <----------ID1            --------->ANAC46 <---------ZAT14                  --------->LBD16            --------->LBD16  --------->ZAT14                  ------>NtERF2            <---------ETT(1) <---------ZAT18   <---------YAB1--------->ANAC58            ----------->HVH21--------->ZAT18 --------->YAB1  --------->ANAC46           --------->HSFB2a(2)    --------->ANAC58           --------->ANAC58     <-----------GT1    ---------->DOF2     --------->ICU4  --------->MYB46(3) <---------TOE2(3) --------->GLK1(2)  --------->DAG2      --------->ARR14(2) --------->DAG2 --------->DOF2   <---------GLK1(2)  ---------->DOF2      <---------ARR14(2)---------->DOF2 ----->GT1 <---------HSFB2a(2)    --------->ANAC58 ----------->HVH21---------->DOF2           ------>NtERF2   tttaaagtaacttcccgacagaatcggaaagtacacaagtaaagcgatgatcagtgacagtatccgccattgaagcgaaaaagttcgaattgactctgcc  13932400                                                                                                    -                              <-----------GT1   --------->HSFB2a(2)                             -----                           <---------ARR14(2)   <---------HSFB2a(2)                             <----                           <---------GLK1(2)<---------CCA1(2)                                   -----                           --------->ARR11(3)<---------ARR14(2)                                 <----                           <---------ARR11(3)------->TEIL              --------->ARR14(2)      ------                           *TSS         <---------ANAC58               <---------ARR11(3)      ------                           --------->ARR14(2)--------->ARR14(2)        <---------ARR11(1)  --------->AHL20(2)                     --------->ZAT18    <---------ANAC46              <---------CCA1(2) --------->TOE2(3)                ---------->DOF2   <----------DOF2              --------->ARR14(2)       ----------->GT1      ---------->DOF2<---------ZAT14    <---------ANAC58       <---------ARR14(2)      ----------->GT1   attgaagtaaaagctcatcaaagtccacagattttccttttagcgtgtatctcgaactcgaagacgatacccatatctatttctactaaatgttaaaata  13932500                                                                                 --------->At5g28300                                                                              <---------At4g35610                                                                              --------->At4g35610                                                                          <-----------GT1                                                                     <---------AHL20(2)                                                                    --------->AHL20(2)                                             --------->TOE2(3)      <---------AHL20(2)                                             --------->TOE1(3)      --------->AHL20(1)           <---------YAB1                <---------AHL20(2)        <---------AHL20(2)      --------->TOE2(3)              --------->AHL20(2)         <---------AHL20(2) -------->LBD16                      <---------AHL20(2)         --------->AHL20(1) ---->ARR14(2)                      <---------AHL20(2)          --------->AHL20(2) -----ARR14(2)                      <---------AHL20(1)          <---------AHL20(1) ---->ARR11(3)                      --------->AHL20(1)       --------->YAB1   <---------ZAT2    ----- -----ARR11(3)      ----------->RAV1(1)  --------->AHL20(2) --------->AHL20(2)--------->ZAT2    ----- --->RVE1(1)      --------->ZAT18   --------->AHL20(2)------->GAMYB--------->AHL20(2)           ----- --->CCA1(1) ---------->DOF2     --------->YAB1   --------->MYB46(3)<---------AHL20(1)        -------   tccccaaacgtttataaaagtgcaacatagcccaaaaataaaattaaacttaacaacagcaaataataaattaatttcacagctgtaacttgagaataac  13932600                      ===================================HOX2a_HOX2a                      =====================HOX2a_HOX2a                      ------>ZmHOX2a(2)                     --------->CCA1(2)                     ======================HOX2a_HOX2a                     ====================================HOX2a_HOX2a                    --------->AGP1  <---------YAB1           ----------->RAV1(1)      ------>ZmHOX2a(1)        --------->ANAC58        --------->ARR14(2)        --------->ANAC58        ------->TEIL                   --------->ARR11(3)    <---------TOE2(3)<------ZmHOX2a(2)                       <---------YAB1  --------->AHL20(2)--------->ARR14(2)        <---------ARR14(2)  <---------AHL20(2)<---------AGP1 --------->TOE2(3)     <---------GLK1(2) <---------ATHB12   <---------ARR14(2)        --------->ARR14(2) --------->ICU4     <---------ARR11(3)        --------->ARR11(3) ---->ANAC46        <-----------ARR10<---------ICU4     <---------At4g35610          <---------ANAC58 ---->ANAC58        --------->ARR11(3)        <---------ARR11(3)                     <---------ANAC58 ---->ANAC58 --------->REM1(1)  <---------ARR14(2)  <-----------HVH21         --------->DAG2 -->MYB52(1) --------->MYB46(3)<---------CCA1(2)  ------>ZmHOX2a(1)          ---------->DOF2  -------   gcaattaatgaagcaacaacaagatctatgtgtgtatccttattgcaatatcctggtcagattatgattttgttttggataaagtttccttggctcaaaa  13932700                                               <---------AHL20(2)                                     <---------TOE1(2)                                 --------->HSFB2a(2)                                 <---------HSFB2a(2)                                    ---------->DOF2                         ---------->DOF2      --------->AHL20(2)                   --------->GLK1(1)                 <----------DOF2 <---------------AtSPL8                            <---------GLK1(1) --->DOF2     <-----------GT1    <---------------AtSPL3                  ------>ZmHOX2a(1)     <-----   gtaaacttccttctatttccttttctctaaagtttctagtacgttctatataatatccaatacctctctaacttcctattttgtgatatccaaagttctg  13932800                                                                                                =====                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                        >>>>>>>>>TBF1                                          ------               <------ZmHOX2a(2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                   ------             ------->GAMYB           >>>>>>>>>TBF1  >>>>>>>>>TBF1                              ------            --------->MYB46(3)    >>>>>>>>>TBF1  >>>>>>>>>TBF1                                 ------       --------->TOE1(3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                         <-----       --------->TOE2(3)       >>>>>>>>>TBF1  >>>>>>>>>TBF1                      ----------->RAV1(1)      --------->ZAT6          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <------------CBF        *TSS  <    <-----------GT1<---------ALFIN1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------YAB1     -------- ----YAB1 --------->MYB52(1)>>>>>>>>>TBF1  >>>>>>>>>TBF1            <---------YAB1  ------->GAMYB----   attttttaaccctaacgatcaacacttgaagaagaagaagaagaagaagaagaagaagaagatggtgatgaagattgcgatagcaacagagagaacagat  13932900  Previous    Next  AGI:  At2g32810.1    Description:  BGAL9 (BETA GALACTOSIDASE 9); beta-galactosidase. Identical to Beta-galactosidase 9 precursor (BGAL9) [Arabidopsis Thaliana] (GB:Q9SCV3;GB:O48836); similar to BGAL8 (BETA-GALACTOSIDASE 8), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G28470.1); similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to BGAL3 (beta-galactosidase 3), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G36360.1); similar to putative beta-galactosidase [Glycine max] (GB:AAQ62586.1); similar to beta-D-galactosidase [Pyrus pyrifolia] (GB:BAD91079.1); similar to pear beta-galactosidase3 [Pyrus communis] (G Range:  from: 13926204    to: 13932427    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g32820.1    Description:  DNA binding / protein binding / transcription regulator. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G33090.1); similar to hypothetical protein 27.t00083 [Brassica oleracea] (GB:ABD65077.1); contains InterPro domain Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal; (InterPro:IPR010990); contains InterPro domain Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type; (InterPro:IPR003617) Range:  from: 13932894    to: 13934056    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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