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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ALFIN1
--------->
ANAC46
------
TOE2(3)
--------->
YAB1
------
TOE1(3)
------->
MYC3
----
AHL20(2)
<-------
MYC3
------->
MYC3
-->
AHL20(2)
----------->
GT1
<-------
MYC3
-->
AHL20(1)
---------->
DOF2
<---------
ALFIN1
---------
---
AHL20(2)
<----------
DOF2
<---------
TOE2(3)
<---------
ATHB12
<--------
---
AHL20(1)
----------->
HVH21
----------->
GT1
--------->
ICU4
---------
atgttagccacaacttgagcgacgcttttgtcaatgcattgcgaaattaagttaaaaaagcatgtgaaatcatcaacacgttttcatctataagtgaaca
13916100
<---------
ANAC55(2)
--------->
YAB1
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
--------->
YAB1
<---------
ZAT14
<---------
ICU4
--------->
ZAT14
<---------
YAB1
------->
TEIL
<----------
DOF2
--------->
WOX13(1)
--------->
ANAC55(2)
---------->
DOF2
<---------
DAG2
<---------
YAB1
<---------
YAB1
---------->
DOF2
>
ZAT18
----------->
HVH21
--------->
GLK1(2)
--------->
ICU4
--------->
ARR11(3)
-
ZAT18
--------->
TOE2(3)
--------->
YAB1
<---------
ATHB12
<-------
TEIL
<---------
ARR11(3)
-----
>
ZAT14
--------->
TOE1(3)
<---------
YAB1
<---------
WOX13(1)
--------->
CCA1(2)
------>
ZmHOX2a(2)
-------
caaaatagaaaccttgaaatgacactttactattaaaatctgattaatcaatgtgattatgatatacgtatatagtgatcttaaaaagagagaaagaagt
13916200
----------->
GT1
<----------
DOF2
--------->
YAB1
<---------
AtMYB61
--------->
ATHB12
<----------
DOF2
<---------
YAB1
----------->
GT1
------>
MYB83
<------
MYB46(1)
<---------
AHL20(2)
---------->
DOF2
<---------
MYB59
<------
MYB83
<---------
AHL20(2)
---->
YAB1
<---------
ICU4
------>
ZmHOX2a(1)
<------
ZmHOX2a(1)
<-----------
HVH21
---->
GT1
------->
TEIL
------>
MYB46(1)
--------->
MYB59
--------->
AHL20(2)
<--
ataacaaaagctgtatatatgtatatttatgacctagctttggtcctttggaagtaatttggttataggatgtctaaaaattaaatgtcattggtaatat
13916300
<---------
YAB1
--------->
YAB1
<---------
ICU4
--------->
ATHB12
<--------
ATHB1
-------->
ATHB1
--------->
ATHB51
--------->
ICU4
-------
<---------
ATHB12
<------
<---------
ATHB51
<---------
RAP2.6(2)
<------
<---------
YAB1
--------->
RAP2.6(3)
-------
<<<<<<<<<<
AGL22
<---------
At5g28300
--------->
YAB1
<<<<<<<<<<
AGL20
<---------
YAB1
--------------->
AGL15
<<<<<<<<<<
AGL24
--------->
ICU4
<---------
ZAT6
---------->
DOF2
---------
HVH21
<---------
YAB1
--------->
MYB52(1)
---------->
DOF2
========================
tgtcagaccaattattgttatcatgtagtcatttttgagttacggccaaaatatgaaattatagaaagtagtcttcattccactaatagccgagagagct
13916400
*
TSS
<
<-
--
<--
-----
-----
-----
<---------
ANAC55(2)
------
--------->
ANAC55(2)
------->
GAMYB
--------->
WOX13(1)
-->
ZAT2
--------->
MYB52(1)
<---------
AHL20(2)
---
At4g35610
--------->
At4g35610
<----------
DOF2
---------->
DOF2
--------->
AHL20(2)
---
ZAT2
------->
TEIL
--------->
GLK1(1)
<---------
At4g35610
<---------
YAB1
--------->
AHL20(2)
-->
At4g35610
--------------->
AGL15
----------->
GT1
--------->
ARR14(2)
----------->
GT1
<-----
============================
MADS_MADS
--------->
ICU4
<---------
REM1(2)
<---------
AHL20(2)
--------->
YAB1
ggtttgattatgtaacttctaagagcatctccaacggtgtaaaaatggagctttcttcacggtttctcttattaaaagttggaaaaaataaatcagaat
g
13916500
<---------
ANAC55(2)
--------->
ANAC55(2)
<-----------
GT1
------->
TEIL
<---------
bZIP60(2)
---------
AHL20(2)
<---------
ANAC58
--------
AHL20(2)
<------
MYB83
<---------
ANAC55(1)
------->
AHL20(2)
<---------
HSFB2a(2)
--------->
ANAC55(2)
-------
WOX13(1)
--------->
GLK1(2)
<---------
ANAC46
------>
GT1
----------->
HVH21
<------
MYB46(1)
<---------
ANAC58
---->
ATHB12
<---------
At4g35610
--------->
ARR11(3)
<---------
ANAC55(2)
---->
YAB1
--------->
ZAT2
<---------
GLK1(2)
----------->
STF1
--->
ICU4
<---------
ZAT2
<---------
RVE1(1)
<---------
TGA2(2)
----
YAB1
--------->
At4g35610
<---------
ARR11(3)
----------->
TGA1
--------->
ANAC46
-------
attaatttttgagagagctgtctctcttgacagagattttggaaggtaagagagacgatgacgtatcacgtttttagacgagactatggcgatggagagt
13916600
<---------
ARR11(1)
<---------
ARR11(3)
--------->
ANAC46
=========================
bZIP_DOF
--------->
TGA1a
-
--------->
GLK1(1)
------->
TEIL
<
<---------
DAG2
--------->
ANAC58
<---------
ANAC58
<-
=========================
bZIP_DOF
--------->
ATHB12
<-
<----------
DOF2
--------->
ANAC58
<----------
DOF2
<---------
YAB1
-----------
<---------
DAG2
--------->
O2
<----------
DOF2
--------->
ICU4
<---------
TOE2(3)
<-----------
GT1
==================================================
bZIP_DOF
<---------
ANAC46
---->
GT1
<---------
GLK1(1)
<---------
CCA1(2)
---------->
DOF2
<---------
ANAC58
--
gaattttgcctttttggaattcccacgactctctgtatctttctttaggcgagactatggcgataaagattgaattttgcttcgacaattgagggtgaaa
13916700
--------->
At4g35610
<---------
ZAT2
<---------
At4g35610
<---------
MYB52(1)
<-----------
HVH21
<-------
<-----------
TGA1
--------
<-------
TEIL
<--------
<---------
GLK1(2)
---------
--------->
At5g28300
<---------
ARR14(2)
------>
MYB83
------->
GAMYB
--------->
LBD16
------>
MYB46(1)
-------->
RAP2.6(3)
<---------
At4g35610
<---------
MYB59
---------
At5g28300
--------->
At4g35610
<---------
MYB111(1)
----------
GT1
<---------
ARR14(2)
--------->
MYB46(3)
--------->
ANAC46
--------
DOF5.7(2)
--------->
ARR14(2)
<---------
GLK1(2)
--------->
ANAC55(2)
>
GT1
----------------------->
TaNAC69(2)
<-------
TEIL
-----------
------->
MYB52(1)
----------->
HVH21
--------->
ARR14(2)
<---------
DEAR3(1)
<---------
MYB46(2)
ttaacggcaaattcaaaatttcggtttctgacaagtcgttccgctggattcgtcagcttctcaccatcggcgaagcgaggttcacctaatcggagatttg
13916800
<----
<-----
------
------
------
<-----
<------
MYB46(1)
<------
MYB83
--------->
STY1(2)
<---------
STY1(2)
--------->
ZAT2
<---------
ZAT2
<---------
ZAT2
--------->
ZAT2
--------->
ANAC58
--------->
ANAC58
--
GLK1(1)
----------->
HVH21
--------->
ANAC58
--------->
ANAC58
->
CCA1(2)
--------->
ANAC58
--------->
ANAC46
--------->
ANAC46
------
-
ARR14(2)
--------->
ANAC58
--------->
ZAT14
--------->
MYB46(3)
<-----
>
ARR14(2)
<------
ZmHOX2a(1)
<-----------
GT1
<---------
SPL7
--------->
MYB59
>
ARR10
<<<<<<<<<<
AtWER
<---------
ANAC46
<---------
CCA1(2)
--------------------->
WRI1
<----
cgactcccagttggagagtaatcgttgaggagaggcaacgagtgacacgagcatatcacttctctcgccattcttcgtacccatcgcaagctaggtctcg
13916900
<-
<-
<---------
At4g35610
--
-------
HVH21
<-----------
RAV1(2)
--
----
O2
<---------
ANAC58
<------
ZmHOX2a(2)
--->
TGA1a
<---------
ANAC58
--------->
ATHB12
--->
O2
<---------
YAB1
--------->
TOE2(3)
-------->
ATHB1
--->
bZIP60(1)
--------->
At4g35610
--------->
TOE1(3)
<---------
ICU4
----
TGA1a
--------->
ATHB12
<---------
WRKY38(1)
--------->
YAB1
--->
bZIP60(2)
<---------
At4g35610
--------->
WRKY18(1)
<---------
YAB1
----
bZIP60(1)
------>
NtERF2
<--------
P
--------->
ARR14(2)
<---------
ATHB12
-------
TGA1
--------->
ALFIN1
<-----------
RAV1(2)
<---------
ARR14(2)
--------->
ICU4
tcactaagctcatgagtgccgctcaggctgctatggaacag
gttagtcaacctttaaacttcgtatttgtttgcattcaataagcctaatcattggatca
13917000
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AGI:
At2g32795.1
Description:
other RNA
Range:
from: 13916500
to: 13917987
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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