Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                                                         --------->ARR14(2)                      <---                                                   --------->ARR11(3)                           <----                                                   --------->GLK1(2)                   --------->LBD16                   --------->GLK1(1)               <---------ARR14(2)    --------->ANAC58      ------                   <---------GLK1(1)               --------->ARR14(2)    --------->ANAC58      ------                  --------->ARR11(3)         ----------->GT1            XXXXXXXXXXXXXXXXXXXX>MIR1886.2      <---------AHL20(1)                   ======================HOX2a_HOX2a          <---------LBD16      --------->AHL20(1)                   =======================HOX2a_HOX2a      <-----------GT1 <-      <---------ARR11(3)          --------------->AGL15  <---------ARR14(2)   --------->ICU4 <------- ----->ZmHOX2a(2) <---------ARR11(3)       <------ZmHOX2a(1)         ---------->DOF2 <---------LBD16 -->YAB1      ---------->DOF2     ===================================================================   gatcccaatatatcaacaaagatttctccaatttcgcttatattaggatgaaaaatctggatccaaaaacataaaacgaaatttttaaccgggaaccaaa  13913000                                                                               <---------RVE1(1)                                                                               <---------GLK1(1)                                                                              --------->ARR11(3)                             <---------------AGL15                            <---------ARR11(3)                             --------------->AGL15                           <------ZmHOX2a(1)                            <-----------------AGL1                          ----------->GT1                            <-----------------AG                           <---------TOE2(3)                            ----------------->AGL3                    <-------TEIL     ---------->DOF2        <-----------------AGL3                 <------MYB83<---------CCA1(1)    --------->LBD16         <-----------------AGL2                 ----------->GT1   <---------HSFB2a(2)   <---------GLK1(1)                         <---------MYB46(3)   --------->HSFB2a(2)   --------->GLK1(1)                         <------MYB46(1) ------ICU4             <---------ARR14(2)                        --------->ALFIN1 -----ATHB12            --------->ARR14(2)                        <---------DEAR3(1) >MYB46(1)            --------->LBD16     --------->TOE1(3)       <---------AtMYB61 >MYB83             <---------LBD16       --------->TOE2(3)     <---------ANAC58       --------->ALFIN1 --------GLK1(1)  <-----------GT1   <---------MYB46(3)          <---------ANAC46     <---------ANAC58 --MYB59        --------->AHL20(2) <---------TOE2(3)            <---------ANAC58     <---------ANAC58 =============================================MADS_MADS        <---------MYB46(3)    <---------ANAC46   catttccgaaagactaaattaaaccggatttctaattttggttaccttagtcttgaatgtgattttgggtggttcataaggatatttgggtgggatgtga  13913100                                             <---------MYB52(1)                                             --------->DOF5.7(2)                                    -------->P <---------DOF5.7(2)            --------->LBD16                                    ------>MYB46(1)                         <---------LBD16                                    ------>MYB83                          <-----------GT1                                    --------->MYB52(1)               <---------ARR11(3)                                   <---------ALFIN1             ----------->GT1                                   --------->MYB55(1)           --------->LBD16                                  ------->GAMYB--------->MYB52(1)    --------->ARR11(3)                                  <---------MYB55(2)          <---------LBD16 ------>NtERF2                                  --------->MYB46(3)   <---------ANAC58--------->AHL20(1)                                 --------->MYB46(3)    <---------ANAC58<---------AHL20(1)                                 --------->DEAR3(2)  <---------MYB46(3)<---------ARR11(3)        ----                      <---------ANAC58   ------>NtERF2<------NtERF2  --------->AHL20(1)         -----                 <---------DAG2 --------->ANAC58     --------->ABI4(2) --------->ARR11(3)      <-----                 <----------DOF2--------->ANAC58     ------>NtERF2   <---------AHL20(1)       <------      --------->At5g28300       -------->P  <-------GAMYB   <---------ALFIN1<-----------------AGL1     ----------->GT1<-----------------AGL1 <---------MYB46(3)--------->MYB52(1)          --------->MYB46(3)    <---------DEAR3(1)<---------ANAC58--------->DEAR3(1)   --------->MYB46(3)<---------LBD16  -------   acagagacggtgaagactcctttttcgtaagggcaacccaccgggccgttaacggtggcttcccaccggaaaatattttccggcgaaggtaaccacgatc  13913200       ------>ZmHOX2a(2)                                                                       <-----     <---------ARR14(2)                                                                        ------     <---------ARR11(3)                                                                       -------     --------->ARR11(3)                                                                       <------     ------->TEIL                                                                          --------->LBD16     --------->ARR14(2)                                                              <----------DOF2    <---------CCA1(2)                                                                <---------DAG2 ------->HVH21                                          <---------At4g35610      --------->ARR11(3) ->ZmHOX2a(2)         <----------DOF2                   --------->At4g35610      --------->ARR14(2) -ZmHOX2a(2)     --------->TGA2(2)                      --------->LBD16          <---------ARR11(3) ---ARR11(3)   --------->ANAC58              --------->GLK1(2)                   <---------ARR14(2)-- -->ARR11(3)   --------->ANAC58   --------->GLK1(2)   <---------LBD16<---------DEAR3(1)  <---------LBD16   tcacatggatcttcagaacgtcatctttttcttgaaattctttccacaatctgttctccgctgattttgagacggtgtctggagatactttaccggagtt  13913300      ---------->DOF2   --------->ANAC46                              <---------AHL20(2) ----ARR14(2)                                 <---------AHL20(2) --->ARR14(2)                                 --------->AHL20(2) -->GLK1(1)          <----------DOF2   --------->ANAC46              <---------YAB1 ---GLK1(1)   <-----------GT1  <---------HSFB2a(2)        ------>ZmHOX2a(1) ---->ZmHOX2a(1)   ------->TEIL--------->HSFB2a(2)<-----------GT1  --------->YAB1               <----   cctcgacgtaaagaatttacgaactttgaagttttggaaacacatcatttttttattctcctctatgtattatgagagagagagagagagagactatgct  13913400                                  <---------ANAC58                                  <---------ANAC58            ----------->RAV1(1)             <------                               <<<<<<<<<<GT-3b               --------->ANAC46                <-------                         --------->AHL20(2)                  --------->ANAC58                --------                         <---------AHL20(2)          <---------AHL20(2)  <---------ANAC55(2) --------                      <---------ICU4                 <-----------GT1   --------->AHL20(2)   <--------   *TSS  <---------YAB1<-----------TBP          <---------AHL20(2) --------->AHL20(2)    ------------ ------DOF2     <---------At4g35610           <----------DOF2--------->ANAC58      <----------DOF2   tttcttagattatagttaagctcatatttatatttttcttgagtatttcttttatttacttatacgacataaattacatataatgctttgtcgaatcatt  13913500      <----------DOF2      --------->TOE2(3)   <---------ARR11(3)   --------->ARR11(3) --------->ANAC58                  --------->ARR14(2) --------->ANAC58                  <---------ARR14(2) ------CBF                      <---------ANAC46 --ICU4                       --------->YAB1                <---------ARR14(2)                  <---- ->ATHB12          <---------HSFB2a(2)                   <---------------AGL15             <---------LBD16 >ATHB1            --------->HSFB2a(2)  --------->At5g28300 --------->ARR14(2)  <---------GLK1(2)   < -ATHB12     ----------->GT1 --------->ICU4            <-----------GT1     --------->STY1(2)    ----- >ATHB5  ---------->DOF2     <---------ATHB12          <---------AHL20(2)  <---------STY1(2)  <------ZmHOX2a(1)   gacaagaactttaaagagtttatagaaaacaatgatgtatacggtgaatgttagtatttacatatatggtggaatctagctagaatttgatattcaggaa  13913600                                      <------MYB46(1)                                      <---------MYB46(3)                                      <------MYB83                        <---------ANAC58                        <---------ANAC46             --------->bZIP60(1)      ----------->GT1             <---------bZIP60(1)    <---------WOX13(1) -----GLK1(1)<---------O2         --------->ATHB12 ----------DOF2         <---------ANAC58                                                           <- ---->GLK1(1)--------->O2        <---------YAB1        ---------->DOF2          <-----------GT1------   ctcttttatattttgacgtcaaaatttcgtgcattttgattggttaagacttaagtataaaggagtcaagactttcttcttatttctctacttcttatca  13913700                                                            xxxxxxxxxxxxxxxx>smallRNA(s)                                                            --------->ZAT14                                                       --------->LBD16xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                       <---------LBD16xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                      xxxxxxxxxxxxxxxx>smallRNA(i)                                                      --------->ANAC46xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                      xxxxxxxxxxxxxxxx>smallRNA(s)                                                     ------->GAMYB  <---------SPL7                                                     <---------LBD16----------->HVH21                                                  <-----------GT1  --------->LBD16                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                               xxxxxxxxxxxxxxxx>smallRNA(i)                                               xxxxxxxxxxxxxxxx>smallRNA(s)                                               <xxxxxxxxxxxxxxxxsmallRNA(s) <---------AHL20(2)                                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                               xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              ------                                             --------->ARR11(3)  --------->LBD16               <-----                            <---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           --------                            --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     ----------->GT1 ---------DOF2          <---------AHL20(2)   <---------ARR11(3)  <---------LBD16     ---------->DOF2< --->YAB1             <----------DOF2 <---------MYB52(1)    <---------ZAT14--------->AHL20(2)<-------   tctttttttgttttgttttaagtgctttaatttataaactgttagtagattttaacccgcggtataccgcgggacgatttattttttaaaagtaatatat  13913800                                                                                         -------->HAHB4                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                  ------->GAMYB          <--------ATHB1                            --------->AHL20(2)                   <------------MYB.PH3(1) <---------ICU4                           --------->AHL20(1)                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                           <---------AHL20(1)                  <-----------GT1           --------->ATHB51                           <---------AHL20(2)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                        --------->AHL20(2)                  <---------ANAC55(2)         --------->ICU4                    <---------YAB1                          --------->ANAC55(2)         <---------ATHB51                   --------->AHL20(2)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                 <---------YAB1                 <---------YAB1 --------->MYB52(1)       <---------AHL20(2)              <---------AHL20(1)                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    --------->AHL20(2) --->AHL20(1) --------->AHL20(1)                <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ----AHL20(1) --------->AHL20(2)        <---------At5g28300 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) ->AHL20(1)   <---------AHL20(2)<---------AHL20(2)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ---------AHL20(2) <---------AHL20(2)  <-----------GT1  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------- --AHL20(1)  --------->AHL20(2) --------->AHL20(2)    <---------YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   attaaaacttgcaaattttatttttataaaatatttatattttacagtttataattgttattaagtaacggtataccacgaattcatgaaataattgtta  13913900  Previous    Next  AGI:  At2g32790.1    Description:  ubiquitin-conjugating enzyme, putative. similar to UBC11 (ubiquitin-conjugating enzyme 11), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT3G08690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21299.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 13912565    to: 13913403    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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