Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->YAB1                                                                <-----------HVH21  --------->ICU4                                                                =====================bZIP_DOF ----->YAB1--------->GLK1(1)                --------->GLK1(1)                   --------->ANAC58 ------>TGA1   --------->WOX13(1)        --------->LBD16                        --------->ANAC58 ---ICU4   --------->CCA1(2)            <---------HSFB2a(2)                     --------->TGA1a -->YAB1  --------->ARR11(3)            --------->HSFB2a(2)                --------->At4g35610    --- ->ICU4   <---------ARR11(3)   <---------ALFIN1                          --------->YAB1   <----------DOF2   gacgatgatgaagatatcaatccattccttctcacacatcttccagagttccagtgtctcttcttgtttattgaatcatctcaagtcagacactttgtgg  13901500                 <---------WOX13(1)               <--------ATHB1               -------->HAHB4               --------->ATHB51               <---------ICU4               --------->ATHB12              --------->ICU4              <---------ATHB12              <---------AHL20(2)              <---------ATHB51       <----------ID1      ----------->GT1     <---------------AtSPL8                               <---------TOE2(3)     --------->DAG2                                    <----------DOF2    ------>ZmHOX2a(1)    ---------->DOF2                               --------->GLK1(2)    ------>ZmHOX2a(1) -------->GT1 --------->AHL20(2)            --------->AtLEC2<------ZmHOX2a(1) <---------HSFB2a(2)   aggtaaaaaagtacaaataattgattttgttagagaaattttagacatggaaattctctttaggatgagactcctcctctctagatgtgatgtttttggt  13901600                                                                                          <----------DOF2                   ---------->DOF2                                                     <---------ARR11(3)                 --------->ANAC58          <----------DOF2  --------->At4g35610       <---------CCA1(2)                 --------->ANAC46  <-----------GT1          --------->ZAT2          <---------DAG2                 --------->ANAC58--------->YAB1             <---------At4g35610     <----------DOF2      --------->DEAR3(2)        <---------YAB1            --------->MYB46(3)   <-----------GT1   ttggagagaccgacgataaacgaaagcttagtctattatacagttctttcttaagttctaacagctgtattagtttttttgtttccctttatctttttgt  13901700                                                                                              -------                                                                                              <------                                                                                              -------                                                                                          --------->TOE1(2)                                                                                          <-------MYC3                                                                                          ------->MYC3                                                                                         --------->TGA1a                                                                                         <---------ANAC58                                                                                         --------->O2                                                                                         <---------O2                                                                                         <---------ANAC46                                                                                         <---------TGA1a                                                                                         ============                                                                                         <---------ANAC58                                                                                    <---------ANAC55(2)                                                                                    --------->ANAC55(2)                                                                          <-----------RAV1(1)--------                                              <---------MYB46(3)          <---------ZAT6 <---------ANAC55(1)                   <---------YAB1       ------->TEIL  --------------->AtSPL8        --------->ANAC46     <-----------GT1              --------->ICU4      --------------->AtSPL3        --------->ANAC58   <---------REM1(1)         ----------->GT1<-------GAMYB             <---------SPL7--------->ANAC58-   gctagttgtaccatttgaaatatgtttgaatttgtaacaatgagcctgttgttgagtcagtacaattttcaacgtactgttggaatacgaaacgtgtgaa  13901800        <---------YAB1        --------->ICU4   <---------ANAC58   <---------ANAC46   <---------ANAC58 --------->ZAT14 <---------ZAT14 -->ZAT18             <----------ID1 ---ZAT14  <---------YAB1                <---------ALFIN1                 --------->ICU4       ------ -->ZAT14--------->YAB1                  --------->AtMYB61           <---------ANAC55(2)   --------->ALFIN1 ===========================bZIP_DOF    --------->MYB46(3)           ----------->GT1       <---------ZAT6 --->HVH21 --------->ICU4             --------->AtMYB61            <---------ATHB12     <------ZmHOX2a(1) -------->ALFIN1 ---------->DOF2---------->DOF2 ----------->GT1------------>CBF  ------------>CBF   ctgtggagtgatgatgattcaaaggcgagaaaacaaaagaccaccaccaagggtaaaatgggaaactcaataagtaaaaatggaccaataggagtgtttg  13901900                  <-------TEIL          --------->TOE2(3)          <----------DOF2             <---------DAG2    --------------->AtSPL8         <-----------GT1    <---------------AtSPL8  <---------ARR11(3)                   ------>ZmHOX2a(1)    <---------------AtSPL3  --------->ARR11(3)   <---------CCA1(2)        <----------DOF2   <------------CBF     ---------->DOF2*TSS    <---------ICU4<---------ALFIN1  <------ZmHOX2a(1)<---------MYB46(3) <----------DOF2<----------DOF2------>ZmHOX2a(1)            ---- ----->HVH21  <---------TOE2(3)<----------DOF2<---------ATHB12  <---------ALFIN1    <----------DOF2   acgaggattgtactttaatgttcgttcaaagctcttttaacttttcccatcatctctttctcacctcctcctctctctttctctctctttctctctctga  13902000                                                                                                    -                                                                                                    -                                                                                                  ---                                                                                                -----                       <---------TOE2(3)               --------->DEAR4(1)         ---------->DOF2 <--                     ---------->DOF2            --------->GLK1(1)       --------->ATHB12       <-----          --------->TOE1(3)                --------->YAB1             <----------DOF2         ------- --->TEIL --------->TOE2(3)          <<<<<<<<<<<<<<<<<LFY           --------->At4g35610       <------   acccagaagaaacctcaaaaaaaaaaaggtttctcaaaacaacaatggtgagttccacagacacaatctctgcttcatttgtatcaaagaagtctcgatc  13902100          --------->ANAC46                          --------->At4g35610          --------->ANAC58                          --------->ZAT2          --------->ANAC58                          <---------At4g35610 ----->ZmHOX2a(1)                                   <---------ZAT2 -------->LBD16                              ------>MYB46(1) -------->RAV1(2)                            -------->P    --------->ARR14(2) ->ZmHOX2a(2)                                ------>MYB83  <---------ARR14(2)       ------->TEIL -------LBD16                               --------->MYB52(1)      <---------AHL20(2) ----GLK1(1)                                ----------->RAV1(1)    --------->AHL20(2)     ---------->DOF2 -->ARR14(2)       ---------->DOF2        --------->MYB46(3)  ----------->GT1    --------->AtLEC2 ---ARR11(3)     <---------YAB1    --------->WRKY18(1)    <------ZmHOX2a(1) <---------GLK1(1)   tcctgaaacatcaccccatatgaaagtcactctcaaggtcaagaaccaacagggagcagaggatttgtataaaattggaactcatgcacatctaaagaaa  13902200             <---------SPL7                      <-------TEIL       <---------ANAC58                        --------->ARR14(2)                         <---------At4g35610       <---------ANAC58                        <---------ARR14(2)                         <---------ZAT2  <---------ICU4                               <---------GLK1(2)                          --------->ZAT2  --------->ATHB12                     --------->ZAT14                        --------->ETT(2) <---------ATHB12                     --------->ARR14(2)                ---------->DOF2  ------>ZmHOX2a(1) <---------YAB1--------->SPL7         <---------ARR14(2)            --------->GLK1(1)  ----------->RAV1(2)   ctaatgagtgcttactgtacgaagagaaacttagattacagttctgtccgattcgtctacaatggtagagaaatcaaagctcgacagactcctgctcagg  13902300                                            ------->TEIL                                           <---------CCA1(2)  <---------MYB46(3)                                         <---------ANAC55(2)  <------MYB46(1)        <---------DAG2 <                                         --------->ANAC55(2)  <------MYB83 <----------DOF2          <                                   --------->AHL20(2)       <---------MYB52(1)       <----------DOF2-                    <---------YAB1 <---------YAB1--------->REM1(1)  <---------ZAT6<---------AHL20(2)-                  <---------At4g35610 <---------YAB1--------->MYB46(3)<---------MYB52(1)        -----        <----------DOF2            <---------AHL20(2)     <-----------RAV1(1)     <-----------GT1 ---   tctctctcatctttagtttcttctgatttttgtttatattattatgtatctacaacaacactgttggtcactgttaactttcatttacttttttgttcca  13902400  Previous    Next  AGI:  At2g32760.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO50091.1); contains domain PTHR15157 (PTHR15157); contains domain PTHR15157:SF2 (PTHR15157:SF2) Range:  from: 13898868    to: 13901801    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g32765.1    Description:  SUM5 (SUMO 5). similar to SUM2 (SMALL UBIQUITIN-LIKE MODIFIER 2) [Arabidopsis thaliana] (TAIR:AT5G55160.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ71620.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 13901939    to: 13902659    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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