Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->At4g35610                                                           --------->YAB1                 --------->ZAT2                                                          <---------YAB1                  <---------At4g35610                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                        <---------ICU4          <---------ANAC58                                                        --------->YAB1          <---------ANAC46                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   xxxxxxxxxxx                                                  --------->ANAC58              <---------ANAC58                                                  --------->ANAC46              <---------ANAC55(1)                                                  --------->ANAC58             <xxxxxxxxxxxxxxxxsmallRNA(i)                                            <---------ETT(2)               --------------->AGL15                                      --------->MYB52(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          <---------ANAC55(2)   --------->AtMYB61          <---------------AGL15 ----------->GT1   <----------DOF2 <---------At4g35610<xxxxxxxxxxxxxxxxsmallRNA(s)       xxxxxxxxxxxx --------->At4g35610      --------->ANAC55(2)   <---------ALFIN1          ----------------->AG >ATHB12<-----------GT1 <-----------GT1     --------->ETT(2)              ----------------->AGL1   ataagctaaataactagatgactttgttacataatcgagctaatggtcgaccacaccatcatcatagtttacgcttaccatttcgtgtaatgagctgaat  13886700                                                                         --------->ARR14(2)                                    ------>MYB83                         <---------ARR11(3)                                    ------>MYB46(1)                      --------->ARR11(3)                                  ------->GAMYB                          <---------ARR11(1)                                 --------->MYB46(3)                      <---------ARR14(2)                                 --------->DEAR3(2)               <---------ANAC58                               --------->MYB52(1)                 <---------ANAC46       <---------YAB1          <-----------GT1                    <---------ANAC58     --------->YAB1  <---------AHL20(2)                      --------->YAB1      ---------->DOF2    <---------YAB1  --------->AHL20(2)            <---------AHL20(2)    <---------GLK1(1) xxxxxxxxxxx>smallRNA(si3)   <---------WOX13(1)  <---------AHL20(2)     <---------CCA1(2) xxxxxxxxxxx>smallRNA(l2) <---------YAB1         --------->AHL20(2) --------->AtLEC2  <----------DOF2   cgatttatgataattttgtttataaaatttgattaaccgactgtaagtttattaatttctctatgatgccttgcatatctctataaagctttgtattatg  13886800                                                            ---------->DOF2                                 <---------YAB1           ------>ZmHOX2a(1)                 <--------                               --------->YAB1            --------->TOE2(3)                  ---------                         <---------YAB1               --------->ARR14(2)                   --------->ANAC58                <---------AHL20(1)                    <---------ARR14(2)                   -------->P                --------->AHL20(2)                   --------->GLK1(1)                     ------>MYB46(1)                <---------AHL20(2)  <---------YAB1   <---------GLK1(1)                   --------->AtMYB61                --------->AHL20(1)--------->YAB1  <---------TOE2(3)          <---------YAB1--------->ANAC58          <---------ALFIN1    <---------YAB1   --------->ICU4            --------->TOE2(3) ------>MYB83        ----------->RAV1(1) --------->CCA1(2)--------->WOX13(1)     ------>ZmHOX2a(1)    --------->MYB46(3)   ttctgaattgcaacacattttattgatatgatatgatgataatttagcaattagggtatcctaaaagctcctaaaacttaaaattgtatgaccaaccaat  13886900                                     <---------AHL20(1)                                     <---------ARR11(3)                                     --------->AHL20(1)                                     --------->AHL20(2)                                     --------->ARR11(3)              <------ZmHOX2a(1)      <---------AHL20(2)     --------->ANAC58               --------->AHL20(2)     --------->ANAC46     --------->ARR11(3)  <-------TEIL  --------->ZAT6              --------->DAG2     --------->ANAC58     <---------ARR14(2)  ------>ZmHOX2a(2)                        ---------->DOF2   ---------->DOF2        --------->ARR14(2) <------ZmHOX2a(2)                      --------->YAB1 -ATHB12   --------->YAB1 <---------ARR11(3)--------->ARR14(2)                     <---------YAB1 >MYB46(3)--------->ICU4 <---------CCA1(2)  <---------ARR14(2)--------->ANAC46   --------->YAB1   tttgtaaaagcaataaggagtttttgtaaatcttcaaaatatattggatccataactcaataacacaaaacttgagactaaaatcataataaagctatac  13887000                                <--------P                              <---------ANAC46                              <---------ANAC58                              <------MYB83                              <---------ANAC58                              <------MYB46(1)                             --------->MYB59                       <---------ANAC58                       <---------ANAC58                       <---------ANAC46                    ------>ZmHOX2a(1)                  ----------->RAV1(2)                                                     --------->ARR14(2)                <---------ARR14(2)                                                        <---------ARR14(2)                --------->ARR11(3)                                                        <----------                <---------ARR11(3)                                            --------->ARR11(3)            <-----------GT1  <---------MYB46(3)                --------->ANAC46          <---------CCA1(2) <---------LBD16--------->ARR14(2)                 <---------TOE1(2)          <---------ARR11(3)<----   attcggggcagtttttaatatcctgacttgttgggtaagtctctaaatattcgtagtttgcatccaagtccctgacttactatcttctcccaaatctcct  13887100                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                               <-----             ---------->ID1         <------ZmHOX2a(1)                                          <-----           <---------ANAC58  --------->AHL20(2)                      <-------TEIL        <---------HSFB2a(1)     <-----------GT1      --------->YAB1                            --------->GLK1(2)    --------->HSFB2a(1) <---------YAB1 ------>ZmHOX2a(1) <---------TOE2(3)                 --------->CCA1(2)    <---------HSFC1(2) -ARR10 <----------DOF2*TSS --------->AHL20(2)        <---------ARR14(2)                 --------->HSFC1(2) ------DOF2<---------ANAC58 <---------AHL20(2)        --------->ARR14(2)               ---------->DOF2   tttatttttactttcgtcctataaactaaaataaataaggaaaacactcttcttcaaatccagtagagagattcaagacgagtctcatcgaaagttcgaa  13887200                                                                                ----------->ARR10                                                                                --------->MYB52(2)                                                                              <---------MYB52(1)                                                                              <--------P       --------->At4g35610                                             --------->ANAC58       <---------At4g35610                                             --------->ANAC58   <-----------TGA1                                                   ------>NtERF2   <-----------HVH21                                                 <---------ALFIN1 ----->HSFB2a(1)                                                    --------->ATERF1(1) -->TEIL                                                            <------NtERF2            <------ZmHOX2a(1) ---->ARR14(2)                                                     <---------ATERF1(1)--------->LBD16 -----ARR11(1)                                                     ------>NtERF2--------->MYB59 -----ARR14(2)                                                    --------->ETT(2)--------->ARR14(2)- ---->GLK1(2)                                      --------->ZAT14--------->bZIP60(1) <---------At4g35610 ----ARR14(1)                                      <---------ZAT18<---------ETT(2)<---------ARR14(2)- ----CCA1(2)     <----------DOF2  <-----------GT1 <---------ZAT6  <---------bZIP60(1) --------->At4g35610   tctttcgtcatctgattagctttctcttagggtttatttcgatttcgatttagtgttctccatcaatggcgacacccatggttagttccgctggaggatt  13887300                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)                                                                                      <---------GLK1(1)                                                                                     --------->ARR14(3)                                                                                     --------->ARR11(3)                                                                         --------->GLK1(2)                                                                     <-----------------AGL2                                                                     ----------------->AGL2                                                                   <---------WRKY18(1)--------->GLK1(1)                                                                  --------->WRKY12   <---------ARR11(3)                                                                  --------->WRKY45   --------->ARR14(2)                                                                  --------->WRKY38(1)<---------ARR14(3)                                                                 <---------WOX13(1)  <---------ARR14(2)                                                                <-------GAMYB       --------->GLK1(1)               ------->TEIL                                    <------MYB46(1) <---------ANAC46             ------->GAMYB                                     <------MYB83    <---------ANAC58         <---------WRKY38(1)                                  --------->MYB59  <---------ANAC58 -------->ANAC58                    <-------TEIL    --------->TOE2(3)<-----------------AGL1        <- -------->ANAC58        ------>ZmHOX2a(1)           --------->TOE1(3)----------------->AGL1      <---   actagcaatgctcaacgagcctcatcctgttttgaagcttcatgcgctctctaacctcaacaatttggttgaccaattctggcctgagatctccactagt  13887400                                                                                              <------                                                                                           --------->GLK1(2)                                                                                          --------->KAN4(2)                                                                                         <---------GLK1(1)                                                                                         <---------KAN4(1)                                                                                         --------->GLK1(1)                                                                                         <----------TaMYB80                                                                                         --------->KAN4(1)                                                                                         --------->HSFB2a(1)                                                                                         <---------HSFB2a(1)                                                                                        <---------KAN4(2)                                                                                        ---------->TaMYB80       ----------->GT1                                                                  --------->ARR14(2)       <---------ANAC55(2)        <---------LBD16                                       <---------ARR11(3)       --------->ANAC55(2)       <-----------GT1                               <---------AHL20(2)    <---------ATHB12       <----------DOF2       <---------TOE2(3)        <---------MYB52(1)  -------   <-----------HVH21       <---------DAG2    --------->CCA1(2)         ------>ZmHOX2a(2)--------->ARR11(3)  --------->ANAC46    <-----------GT1     <---------TOE2(3)          <---------ARR11(3) <---------ARR14(2) ----------------AGL1<-----------GT1--------->LBD16              --------->ANAC55(2)<---------LBD16 ------ZAT18     <----------DOF2<-----------GT1  <---------TOE1(3)   <---------AGP1<---------LBD16   gtccccatcatgtaattctcttttaaaccctttttttccggtttgagatttagggttttgttctctcacttgatctgtttttttattcgggatattctag  13887500                                          <---------ARR11(3)                                          --------->ARR11(3)                                         <------MYB46(1)                                     --------->ALFIN1                                   <---------ANAC58                                   <---------ANAC46                                   <---------ANAC58                               <-------GAMYB                              <---------MYB46(3)<---------HSFB2a(2)                         --------->ZAT2  <------MYB83          <---------TOE2(3)                         <---------ZAT2 <---------AtMYB61     ---------->DOF2          <---------ARR14(2) <---------AtMYB61  --------->HSFB2a(2)                    <---------WOX13(1)          --------->ARR14(2) --------->ALFIN1   --------------->AGL15         <---------ANAC58 ---HSFB2a(2)            --------->At4g35610   <-----------------AG           <---------ANAC58 -->HSFB2a(2)            <---------At4g35610   <-----------------AGL1       <---------YAB1   agaagattgtgggatttggattgtttgagctgtggttgtgtgtaggtcttctcgatttgggtattaaagttcaaaattttgagtgagggattgatagttt  13887600  Previous    Next  AGI:  At2g32730.1    Description:  26S proteasome regulatory subunit, putative. similar to 26S proteasome regulatory subunit, putative [Arabidopsis thaliana] (TAIR:AT1G04810.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81101.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44405.1); similar to 26S proteasome subunit RPN2A [synthetic construct] (GB:AAP82172.1); contains InterPro domain 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015); contains Inte Range:  from: 13887123    to: 13892813    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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