Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------YAB1                            <---------ATHB12                   --------->YAB1                                                                ----                  <---------ATHB12                                                           --------              <---------ZAT14<---------ICU4                                             --------->LBD16              --------->ZAT14--------->YAB1                                             ------>ZmHOX2a(1)     <----------DOF2      --------->WOX13(1)            --------->YAB1                  <---------YAB1 ---->YAB1 ------>ZmHOX2a(1)--------->ICU4           --------->YAB1       <---------ARR11(3)---------   aaaatttcttttcctgtgcaatgaaaatcaattatcagttatcaagagcaaactttcatcacaatgcagaccacaaaatcatctctaatcctgataaagt  13857700                              <---------ANAC46                              --------->ANAC55(2)                              <---------ANAC58                              <---------ANAC55(2)                              <---------ANAC58                                                   <---                             <-------TEIL                                                      <-----                           <---------ARR14(2)                                                  <-----    <---------DAG2         --------->ARR14(2)     <---------WRKY18(1)                        <-------    <----------DOF2   --------->LBD16  <---------At4g35610                               <---------ALFIN1 ----->ZAT18         <-----------RAV1(2)         ----------->HVH21                   --------->ANAC58 ->DAG2           --------->ANAC46     --------->At4g35610                           --------->ANAC58 ->DOF2  <-----------GT1  <------ZmHOX2a(1)---------->DOF2                   <---------YAB1 <--------   tcacaactttttctcatttccccccagaggatgcgtaattgagcagaaagcttgacctgtgtaagagagggagccaattgtgtttgaacgcacactgtcg  13857800                                                   ------->TEIL                                                 ------->GAMYB                                                <---------MYB52(2)                                                --------->MYB46(3)                                              --------->MYB52(1)                                            <---------MYB52(2)                                            --------->MYB46(3)         ------>ZmHOX2a(1)             --------->ANAC55(1)   <---------ARR11(3)                  --------->ANAC58   --------->ARR11(3)                  --------->ANAC55(2)                    --------->MYB46(3) ---NtERF2                ----------------------->TaNAC69(2)        ------->TEIL ----ANAC46      <---------TOE2(2)     <---------ANAC55(2)    --------->ICU4--------->ARR14(2)   ---- ----ETT(2)      <---------TOE1(2)     --------->ANAC46     <---------At4g35610      --------->YAB1 ----HVH21     <---------ANAC58        --------->ANAC58   <---------ZAT14   <---------ARR14(2)   <--- ---RAV1(1)    <---------ANAC58       <---------LBD16     --------->ZAT14--------->HSFB2a(2) --------   tcgaagctctccttcttccttggtttgtctgagcccttgatacggaactaacgaacccattgaactgatgaatttgcagaaccaccatgacaatgagttc  13857900                                                                                      *TSS                               <---------YAB1                                <---------ZAT14 ----->HSFB2a(2)            <----------DOF2                                  --------->ZAT18   ------ ------HSFB2a(2)        <---------ZAT18                                 <---------GLK1(2)   --------- ->GLK1(1)              --------->ZAT18                               --------->ICU4<-----------HVH21   caaaacaaatgctataaaaccaagagcgaacttttgataaacagagataaaacttgtgaagagaaaactggaaagattgtgcaatgtgtcagagaatgtg  13858000 ------->MYC3 <-------MYC3 ----->HVH21                                                                   --------->TOE2(3) >GLK1(2)                             --------->TOE2(3)              --------->AHL20(2)   acacgtttacagtcttacaaaacaaaaacattttgggttacattaactcaaaacaaacttctgttctaaaattaaaacaaatctaaatgttagtatcgtt  13858100              --------->ARR14(2)              <-----------GT1              <---------ARR14(2)                            --------->ANAC58             <---------CCA1(2)                              --------->ANAC58            <---------AHL20(2)                           --------->ARR14(2)           --------->YAB1                             ------>ZmHOX2a(2)          <---------YAB1                            <---------ARR14(2)        <---------AHL20(2)                      <---------LBD16       --------->ICU4                  *TSS  <---------ARR14(2)                   <---------TOE2(3)       --------->AHL20(2)      <-----------GT1 <---------LBD16           <-----------RAV1(2)     <---------ICU4       <----------DOF2    --------->ARR14(2) ----------->HVH21 <---------TOE1(3)    --------->ICU4------>ZmHOX2a(1)   <-------TEIL  --------->ARR14(2) <----------DOF2             <-   tctgtaatatttattatatcctcttcttcttttttactgattcatcaaatcggggatcggataagcctgactgcttcagggtttaagggttactctcact  13858200                                                                                                  <--                                                                                         ------>NtERF2                                                                                        <---------ZAT18             --------->ANAC58        --------->GLK1(2)                                  --------->LBD16             --------->ANAC58  <---------ANAC58                                        <---------ANAC58           <--------P          <---------ANAC58                                        <---------ANAC58      --------->LBD16          ----------->GT1                                        <---------LBD16      --------->At4g35610      <---------ANAC55(2)                             <----------DOF2    ---      <---------At4g35610      <---------ANAC46   <----------DOF2             <---------DAG2      <-- --------ALFIN1               <-------TEIL        <---------DAG2              --------->TOE2(3)   <--   cacacttccgctggtaagaaattcgatttcgatgcgtataatctgtcttccgcttttttttttggttttgaaatcgacaacctttttttgcggacttgtt  13858300            --------->ARR11(3)            <---------ARR11(3)            <---------ARR14(2)            --------->ARR14(2)      <-------TEIL                              --------->YAB1 ----MYB83 <---------CCA1(2)                   <---------ATHB12 -------->GT1                          <----------DOF2                         --------->LBD16 -------ANAC46                         <---------DAG2                          ------>ZmHOX2a(1)   <- ----MYB46(1)                       <-----------GT1 ---------->DOF2          <---------LBD16    <----   gggttaaattcgtatatcttcaattttgcgatgagttttcacttttccaatcgaaatagcaaatgggcattagctaatttcctgaattgtgagtttttgt  13858400                                                                     <---------AHL20(2)                                                                     <---------YAB1                                                                    <---------AHL20(1)                       --------->ANAC58                             --------->AHL20(2)                       --------->ANAC46                   --------->At4g35610       --------->ANAC46       <-----------HVH21              ----------->GT1     <---------At4g35610<---------DAG2 ----------GT1         --------->ANAC58      --------->YAB1 <----------DOF2  <----------DOF2 -----ZAT6      <-------TEIL    ---------->DOF2 ---------->DOF2     --------->AHL20(1)   gttacgctgtgtcattgattcatataagctattgcaaagagagtaaatgataaagccttcagctttacaatataattcacttttacacactagagtttag  13858500                                                                                                 <---                                                                                        ------>ZmHOX2a(2)                                                                                      <---------ARR14(2)                                                                                      <---------AGP1                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)                                                                                      --------->ARR14(2)                                                                                     <---------CCA1(2)                       <------ZmHOX2a(1)        ---------->DOF2              <-------TEIL  <---------TOE1(2)                    <-----------RAV1(2)   --------->bZIP60(2)            <---------TOE2(3) <---------TOE2(2)         <----------DOF2   <-----------GT1--------->ANAC46              ---------->DOF2<---------GLK1(1)  <-----------GT1   <---------LBD16<----------DOF2  <---------GLK1(2)  <---------AHL20(2) <----------   aaattcaccttctttctctgtttcaggagttacaagactttaacacatcacaaagaatttcgatatgtgttatttaaagttcattgtggatctcaggttt  13858600  Previous    Next  AGI:  At2g32640.1    Description:  similar to Os08g0422000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061825.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24043.1); similar to CM0545.530.nc [Lotus japonicus] (GB:BAF98233.1); contains domain G3DSA:3.50.50.60 (G3DSA:3.50.50.60); contains domain SSF51905 (SSF51905) Range:  from: 13853996    to: 13857986    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g32650.1    Description:  similar to PTAC18 (PLASTID TRANSCRIPTIONALLY ACTIVE18) [Arabidopsis thaliana] (TAIR:AT2G32180.1); similar to unknown [Brassica rapa] (GB:ABL97961.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051) Range:  from: 13858139    to: 13859157    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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