Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                              -------                                                                                              <------                                                                                            ---------                                                                                           <---------YAB1                                                                                          <---------AHL20(2)                                                                                          --------->AHL20(2)                                                          <-----------TGA1                <---------AHL20(1)                                                         --------->bZIP60(1)              --------->AHL20(1)                                                         <---------bZIP60(1)             XXXXXXXXXXXX                                                        <-----------STF1                 --------->YAB1                                  ------------>CBF     --------->MYB52(1)               <---------YAB1                                  <---------ATHB12     <-----------GT1                --------->YAB1                         <---------ARR11(3)     ----------->GT1<-----------RAV1(2)   <-------TEIL                    ------------>CBF        ---------->DOF2--------->TGA2(2)     <---------YAB1------   aataagatgagacagtttaaggcccaatatcagcccatcaatgtgttaaagagaaaataacgtcatcaggttttatttcatacatgattcattataatga  13842900                                                                                                   --                                                                                                -----       <---------AHL20(2)                                                                    --------       --------->AHL20(2)                                                                 --------->YAB1      <---------AHL20(2)                                     --------->YAB1              <---------YAB1 -->HAHB4                                       --------->ATHB12                        <---------AHL20(1) -->ICU4    <---------AHL20(2)               --------------->AGL15                      --------->AHL20(2) ---YAB1    --------->AHL20(2)               <---------------AGL15--------->ANAC58      <---------AHL20(2) >YAB1--------->AHL20(2)                    <-----------------AGL1--------->ANAC58   --------->AHL20(2) XXXXXXXX>MIR418   ------>ZmHOX2a(1)     <----------DOF2    <---------YAB1<-----------GT1<---------AHL20(2) --->YAB1  --------->AHL20(2)          <---------At4g35610--------->YAB1  <---------ICU4--------->AHL20(1)   taaactgattaaattaaaatcctagatagacagacaatttctgctttcacttattggaatttataatcaagctaaatcactacttgataatataataaga  13843000                             <---------ICU4                             --------->YAB1                          <---------ICU4                         --------->AHL20(2)                         <---------AHL20(2)                   -------->ATHB1                                                         <---------MYB52(1)                   --------->YAB1                                                       <---------ANAC55(2)                   <---------ICU4                                                       <---------ANAC58                  --------->ICU4                                                        --------->ANAC55(2)                  --------->AHL20(1)                                                    <---------ANAC58                  --------->AHL20(2)                     <------------CBF               --------->ANAC46                  <---------AHL20(2)                    --------->ATHB12               <---------TOE2(2)    --------->AHL20(2)  <---------YAB1    <---------ANAC58                          <---------ANAC58   --------->AHL20(2)<---------YAB1       <---------ANAC46    <----------DOF2       <---------ANAC58   <---------AHL20(2)--------->ICU4 <---------AHL20(2) <---------AHL20(2)   --------->TOE2(3) ------->YAB1     <---------YAB1    --------->AHL20(2) <---------YAB1     ------->TEIL <---------TOE1(2) ---->YAB1 <----------DOF2--------->YAB1  <---------ANAC55(1)<---------ANAC58     <---------ARR11(3)- ->YAB1    --------->TOE2(3)--------->ICU4<---------ANAC58   <---------ANAC58------------>CBF       <   atgatataaattactttaaaattattattaattatcaaataaatgcgtgtaactaatttcattgctttaaaacatgaacatcaatgtcttacgttacttc  13843100                                                                 <---------At4g35610     <---------ICU4                                                                 --------->HSFC1(2)      <--------HAHB4                                                                 <---------HSFC1(2)      --------->ATHB12           --------->ANAC58         <---------ANAC58             --------->HSFB2a(1)    <---------YAB1           --------->ANAC58         <---------ANAC58         <---------REM1(1)          --------->ICU4    --------->ANAC46          <---------TOE1(3)              --------->ALFIN1        --------->ICU4    --------->ANAC58          <---------TOE2(3)   ------>ZmHOX2a(2)                 <---------KAN4(2)    --------->ANAC58     <---------DAG2         --------->ARR11(3)    <---------ANAC58<---------ICU4 -------->HSFB2a(2)      <----------DOF2        <---------ARR11(3)    <---------ANAC58--------->YAB1 ---------HSFB2a(2)<----------DOF2  <---------ANAC46   --------->ANAC46    <----------DOF2--------->TOE2(3)   ttccacaagaaacaagtaagactttgactttttaggtttcttgttctcgtgatcttcacgaaggtgaagcttccctgcttatagggaatcatcattaact  13843200                            --------->ANAC55(2)                            <---------ANAC58                            <---------ANAC58                            <---------ANAC46                           <-------TEIL                         <-------MYC3                         ------->MYC2                        --------->TGA1a                      <---------ALFIN1                <---------HSFC1(2)<---------AHL20(2)                --------->HSFC1(2)--------->AHL20(2)                                         --------                --------->HSFB2a(1)         --------->YAB1                                   --------                <---------HSFB2a(1)       --------->ANAC46                       ----------------->AG              <------ZmHOX2a(1) <-----------TBP       <-------TEIL             --------->ARR14(2)       <---------AHL20(2)------->MYC3     --------->ANAC58                     <---------ARR14(2) <--       --------->AHL20(2)<-------MYC2     --------->ANAC58                    --------->GLK1(1)------   cttagcacattaattaggagtttcccacatgcgtatttatatacaagcatgaagcattcatcgatgtgaagttcgaaaacatatccaaaaactgcaagaa  13843300                                                   ------>ZmHOX2a(2)                                                  <---------GLK1(1)                                                  --------->GLK1(1)                                                 --------->ARR11(3)                                                 <---------ARR11(3)                                                 <---------ARR14(2)                                                 <---------AGP1                                                 --------->ARR14(2)              <---------ARR14(2)                <------ZmHOX2a(1)              --------->ARR14(2)            ---------->DOF2--------->ANAC46                    <-----             <------NtERF2          ======================HOX2a_HOX2a                  --------->MYB52(1)           <---------ANAC46         ------>ZmHOX2a(1)      --------->ANAC58           ----------->HVH21   ------>ZmHOX2a(1)                =====================HOX2a_HOX2a               --------->ARR11(3) ->ANAC58  <---------ANAC58      ------>ZmHOX2a(1)<------ZmHOX2a(2)                <---------ARR11(3) ->ANAC58  <---------ANAC58      ========================HOX2a_HOX2a              <---------CCA1(2) -------At4g35610     <----------DOF2 <----------DOF2      --------->ANAC58   ----------->GT1  >>>>>> ---->DOF2<---------LBD16        =========================HOX2a_HOX2a       --------->At4g35610------   agctcctcccatggcggattcaagcttttctcttcctcctctttgtgaaaggatctcatacacgaactattttctaagagctgtatatctcacggttcta  13843400                                                                        <----------DOF2                               ----------->RAV1(1)                  <----------DOF2                              --------->ANAC46              <---------ANAC58                              <---------ETT(1)              <---------ANAC58    ------->TEIL                           --------->GLK1(2)           <---------MYB52(1)       --------->ARR14(2)                           <---------ARR14(2)  <----------ID1      <---------ANAC58                           --------->ARR14(2)  --------->ANAC58    <---------ANAC58 <----------DOF2        --------->DEAR3(1)     --------->ANAC58------->PIF5     --------->GLK1(2) ----HSFB2a(2)         --------->ANAC58        --------->ANAC46<-------PIF5     <---------ARR14(2) >ZML2<----------DOF2  --------->ANAC46     --------->ARR14(2)<---------TGA1a  <---------CCA1(2) --->HSFB2a(2)         --------->ANAC58     <---------ARR14(2)=================bZIP_DOF   ggccttttcttttctcttctcttgcaccgaatccgacatacgagcgaatacgacaacgtttggctcgtggctttcttttgtgaatcttgtttcttcttgg  13843500                 --------------->AGL15                 <---------------AGL15                <-----------------AGL1                ----------------->AGL3                ----------------->AGL1                <-----------------AGL3                <-----------------AGL2                ----------------->AG            <---------ANAC58            <---------ANAC58          <-----------GT1       <---------At4g35610    <---------WOX13(1)<---------YAB1       <---------ICU4           <---------ZAT2 <----------DOF2  <---------YAB1    --------->At4g35610         --------->At4g35610 ------>ZmHOX2a(1)----------->GT1            -----    <---------At4g35610        ------>ZmHOX2a(1)    <---------YAB1---------->DOF2        --------->ANAC46   tatgtctgcttattacttgcctaaaatggagtcctgctgatactaaaccctttcctgatagacttgatgaaaggtatcattttcgttttacacataaatc  13843600                                        <---------YAB1                                     <---------YAB1                                   --------->ATHB51                                   <---------ICU4                                   --------->ATHB12                                  --------->ICU4                                  <---------YAB1                                <---------ICU4                       --------->ARR14(2)                       <---------ARR14(2)                 <-----------GT1<--------HAHB4                                                      -             <---------YAB1     --------->YAB1                                    --------->TOE2(3) <            <---------AHL20(1)  -------->ATHB1         ---------->DOF2         ------>MYB83 <--------            <---------AHL20(2) --------->ICU4<-----------GT1                   ------>MYB46(1)    <--          <---------AHL20(2)   <---------ATHB12 <----------DOF2             <---------STY1(2)<------- ---->YAB1<---------YAB1       <---------YAB1<---------AHL20(2)             --------->STY1(2)--------   atatatacaaatattatttttagcatatatacaatcattattgttattaactttgtataaagtctgagctagtttgctacctagccttagtttaatcatc  13843700                                    --------->TOE2(3)                                              <-                                  <---------AHL20(2)                                        <--------                            --------->ANAC55(2)           ----------->GT1                   ---------                            <---------ANAC55(2)       --------->AHL20(1)                  <---------MYB46(3) -------->ARR11(3)          --------->ANAC46          <---------AHL20(2)               <---------ANAC46 ---------ARR11(3)          --------->ANAC55(1)       --------->ARR11(3)         ------>MYB46(1)   <- -ATHB12                    --------->ANAC58          <---------AHL20(1)       <---------MYB59xxxxxxx -------YAB1                --------->ANAC58       --------->AHL20(2)        <---------ARR11(3)   <-- --ICU4 <---------ICU4     <---------TOE2(3)  <---------ANAC46          <-------TEIL  <---------DEAR3(1) ->YAB1<-------TEIL    <----------DOF2   ----------->RAV1(2)      <---------LBD16------>MYB83<-------   aagataatattcatttctatgttatcttttacgtaattcattaacctggcatataaaatattgtaatttcagggttcatgaccttccttcggtggatatg  13843800  Previous    Next  AGI:  At2g32610.1    Description:  ATCSLB01 (Cellulose synthase-like B1); transferase/ transferase, transferring glycosyl groups. similar to ATCSLB03 (Cellulose synthase-like B3), transferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G32530.1); similar to ATCSLB05 (Cellulose synthase-like B5), transferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G15290.1); similar to ATCSLB02 (Cellulose synthase-like B2), transferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G32620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24020.1); contains InterPro domain Cellulose synthas Range:  from: 13843311    to: 13846590    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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