Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------HSFB2a(2)                                                                 --------->HSFB2a(2)                                                            ------>MYB46(1)                                                            ------>MYB83                                                           <---------------AGL15          --------->ANAC58                   --------->AHL20(2)  <---------HSFC1(1)          --------->ANAC58                   <---------AHL20(2)  --------->HSFC1(1) --------->TOE2(3)                    ----------->GT1     <---------MYB59 -------->RAV1(1)              <---------ANAC46           --------->TOE2(3)------->GAMYB ----->ANAC46                  <---------ANAC58         ------->TEIL      --------->MYB46(3)    <---- -->ZAT18 --------->ANAC46     <---------ANAC58    ---------->DOF2      --------->MYB52(1)  <--------   caacataaaaacacaccaaaaatcaaattagtggcatgaggggaaaattaaaaaaaagaacctaattctagaaacaacagccaaacaaactcaagagcta  13842300                                                                                           --------->MYB46(3)                                                                                       --------->MYB46(3)                                                                               <--------P----------->RAV1(1)                                                         <-----------GT1    <---------TOE2(2)                                                 ----------->GT1            <---------TOE1(2)     ---                       --------->MYB52(1)        <------MYB83              ==========================RAV -------HVH21 --------->YAB1                     <------MYB46(1)           <-----------RAV1(2)    --- -ARR11(3) --------->YAB1                       --------->MYB59   --------->YAB1<-------TEIL      <--   tcacacatatgaataatcaaactcaaaacggagcaaaaatgtagatgaagttggtaaaatcacagtattcataaatctcaggttgatcatccaacaattg  13842400                                                                               <----------DOF2                                                                              ------>ZmHOX2a(2)                                                                             <------ZmHOX2a(2)                                                                            --------->ARR11(3)                                                                            <---------ARR11(3)                                                                            ------->TEIL                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                           <---------CCA1(2)                                                                         <---------ANAC55(2)                                                 ------>MYB46(1)         --------->ANAC55(1) ---->TEIL                 <-------TEIL          ------>MYB83   <---------AtLEC2 ------>ARR14(2)    ---------->DOF2      >>>>>>>>>MYB98  --------->ATHB12--------->ANAC55(2) <------- -------ARR14(2) ----------->RAV1(1) ----------->GT1    <---------YAB1  <---------LBD16 <---------ARR11(3)   aatctgctacttactcgtgcaacaaagcatacataaatacagtaacataccttccaagatgatttcgcatgaaatacggatctttagcaaggtctatggt  13842500                                                               --------->ABI4(1)                                                               ------>NtERF2                                                               <---------ATERF1(1)                                                              --------->RAP2.3(3)                                                              --------->RAP2.6(2)                                                              --------->RAP2.3(2)                                                              --------->ATERF1(2)                                                              --------->DREB2C(2)                                                              --------->ANAC58                                                              --------->DEAR3(1)                                                              <---------ATERF1(2)                                                              --------->RRTF1(2)                                                              --------->ANAC58                                                              --------->ANAC46                                                              --------->RRTF1(3)                                                             --------->RAP2.6(1)                                                             <------NtERF2                                                             --------->ATERF1(1)                                                             --------->RRTF1(1)                                                             --------->ORA47(2)                                                             --------->DEAR4(2)                                                             --------->RAP2.3(1)                                                             --------->ERF1                                                            <---------DEAR4(2)                                                            <---------RAP2.6(1)                                                            <---------RRTF1(1)                                                            ------>NtERF2                                                            <---------ATERF1(1)                                                            <---------ERF1                                                            <---------RAP2.3(1)                                                            --------->ABI4(2)                                                            <---------ORA47(2)                                                           --------->RAP2.3(2)                                                           <---------RAP2.3(2)                                                           <---------DEAR3(1)                                                           --------->DEAR3(1)                                                          --------->ATERF1(1)                                                          --------->RAP2.3(1)                                                          --------->ORA47(2)                                                          --------->RAP2.6(1)                                                          --------->ERF1                                                          --------->DEAR4(2)                                                          --------->RRTF1(1)                                                          <---------ABI4(2)                                                          <------NtERF2                                                         <---------ORA47(2)                                                         <---------ERF1                                                         <---------RAP2.3(1)                                                         <---------DEAR4(2)                                                         <---------RRTF1(1)                                                         ------>NtERF2                                                         <---------ATERF1(1)                                                         <---------RAP2.6(1)                                                        <---------RAP2.6(2)                                                        --------->ALFIN1                                                        <---------RAP2.3(3)                                                        <---------RAP2.3(2)                                                        <---------DEAR3(1)                                                        <---------RRTF1(2)                                                        <---------RRTF1(3)                                                       <---------ABI4(1)                                                       <------NtERF2                                                       --------->ATERF1(1)                                                      <---------ATERF1(1)                                                      <---------RAP2.3(1)                                                    --------->ATERF1(1)                                                    <------NtERF2                         --------->ANAC46          <---------SPL7          <---------ANAC58                       --------->MYB52(1)          --------->LBD16 <---------MYB52(2)                      ----------->HVH21            <------NtERF2 <---------ALFIN1 --------->ANAC58                --------->ARR14(2)                 <---------ATERF1(1)     <---------ANAC58                <---------ARR14(2)      <------NtERF2<---------DEAR3(1)    <---------ANAC46         < --TOE2(3) --------->MYB52(1)  <------ZmHOX2a(2) <---------LBD16<------NtERF2     --------->ANAC58  <   ttcaagagcaagacgacggagacgctcacggcgatctatggcctcgttttggccggaggcggcgccgccactaccaggcttggaaccccattctctatcc  13842600                       --------->ANAC46                       --------->ANAC58                  <----------DOF2             <------ZmHOX2a(2)             <---------GLK1(1)                                                  <---------HSFB2a(2)             --------->GLK1(1)                                                  --------->HSFB2a(2)            <---------ARR11(3)                                                 <---------ANAC58            --------->ARR14(2)                                                 <---------ANAC46            --------->ARR11(3)                                                 <---------ANAC58            <-----------ARR10                                             --------->ATHB12            <---------ARR14(2)                                    --------->At4g35610           <------ZmHOX2a(1)                                   <---------At4g35610 ---------At4g35610    --------->ANAC58        ------>ZmHOX2a(1)  <---------At4g35610 ---------ZAT2------>ZmHOX2a(2)         <---------ATHB12      <-----------RAV1(1)                  <-   atagctgctactaggatctcctttcacgctaactaatccccaatcggtccttctatgctctcttgtgctgctctctcgattgctggaaaattttgacaat  13842700                                                              <------MYB83                                                              ----------->GT1             <------MYB46(1)                                                              <------MYB46(1)             <------MYB83                                                             <---------AtMYB61            <---------ANAC58                                                           <---------ANAC58              <------MYB46(1)                                                           <---------ANAC58              <------MYB83                                                           <---------ANAC46            <<<<<<<<<MYB98                                        *TSS              <---------MYB46(3)           <--------P                                     ---------->DOF2      --------->MYB55(2)          <---------ANAC58                               ----------->GT1         <---------ARR14(2)             <---------ANAC58              <---------YAB1 <---------LBD16           <------------CBF               <---------ANAC46    --------->ARR11(3)    <---------ARR14(2)      <---------ANAC46                    <-------GAMYB    <---------ARR11(3)    --------->ARR14(2)   --------->ALFIN1     <---------YAB1   <---------MYB46(3)  ----------->ARR10      --------->ATHB12  <-----------RAV1(2)<---------MYB46(3) <-----------RAV1(1) --------ANAC46         <---------YAB1--------->DAG2 ----------->ARR10   --------->GLK1(1)<---------ANAC58   tgctgagatttttcttatgacttatgaagattggggaaaaaaagcacagatgggggagattgggtggtttatcagagaccctaatgtgggttgggtttcg  13842800                                                                                               ------                                                                                              <------                                                                                              -------                                                                                            ---------                                                                                           <---------YAB1                                                                                          <---------AHL20(1)                                                                                          --------->AHL20(1)                                                          <-----------TGA1                --------->AHL20(2)                                                         <---------bZIP60(1)              <---------AHL20(2)                                                         --------->bZIP60(1)             --------->YAB1                                                        <-----------STF1                 XXXXXXXXXXXX                                  <---------ATHB12     --------->MYB52(1)               <---------YAB1                                  ------------>CBF     <-----------GT1                --------->YAB1                         <---------ARR11(3)     ----------->GT1<-----------RAV1(2)   <-------TEIL                    ------------>CBF        ---------->DOF2--------->TGA2(2)     <---------YAB1------   aataagatgagacagtttaaggcccaatatcagcccatcaatgtgttaaagagaaaataacgtcatcaggttttatttcatacatgattcattataatga  13842900                                                                                                   --                                                                                                -----       <---------AHL20(2)                                                                    --------       --------->AHL20(2)                                                                 --------->YAB1      --------->AHL20(2)                                     --------->YAB1              <---------AHL20(2) --->YAB1                                       --------->ATHB12                        <---------AHL20(2) ---YAB1    <---------AHL20(2)               <---------------AGL15                      --------->AHL20(1) -->ICU4    --------->AHL20(2)               --------------->AGL15--------->ANAC58      <---------AHL20(1) >YAB1<---------AHL20(2)                    <-----------------AGL1--------->ANAC58   --------->AHL20(2) XXXXXXXX>MIR418   ------>ZmHOX2a(1)     <----------DOF2    <---------YAB1<-----------GT1<---------YAB1 -->HAHB4  --------->AHL20(2)          <---------At4g35610--------->YAB1  <---------ICU4--------->AHL20(2)   taaactgattaaattaaaatcctagatagacagacaatttctgctttcacttattggaatttataatcaagctaaatcactacttgataatataataaga  13843000                             --------->YAB1                             <---------ICU4                          --------->YAB1                         --------->AHL20(2)                         <---------AHL20(2)                   -------->ATHB1                                                         <---------MYB52(1)                   <---------ICU4                                                       <---------ANAC58                   --------->YAB1                                                       <---------ANAC58                  --------->ICU4                                                        --------->ANAC46                  <---------YAB1                                                        <---------ANAC55(2)                  <---------AHL20(2)                     <------------CBF               --------->ANAC55(2)                  --------->AHL20(2)                    --------->ATHB12               <---------TOE2(2)    --------->AHL20(2)  <---------YAB1    <---------ANAC58                          <---------ANAC58   <---------AHL20(2)<---------YAB1       <---------ANAC55(1) <----------DOF2       <---------ANAC58   --------->AHL20(2)--------->ICU4 --------->AHL20(2) <---------YAB1       --------->TOE2(3) ------->YAB1     --------->AHL20(1)<---------AHL20(2) <---------AHL20(2) ------->TEIL <---------TOE1(2) ---->YAB1 <----------DOF2<---------ICU4  <---------ANAC46   <---------ANAC58     <---------ARR11(3)< ->YAB1    --------->TOE2(3)--------->ICU4<---------ANAC58   <---------ANAC58------------>CBF       -   atgatataaattactttaaaattattattaattatcaaataaatgcgtgtaactaatttcattgctttaaaacatgaacatcaatgtcttacgttacttc  13843100                                                                 --------->HSFB2a(1)     <--------HAHB4                                                                 <---------At4g35610     --------->ATHB12                                                                 --------->HSFC1(2)      <---------ICU4           --------->ANAC58         <---------ANAC58             <---------HSFC1(2)     --------->ICU4           --------->ANAC58         <---------ANAC46         <---------REM1(1)          <---------YAB1    --------->ANAC58          <---------TOE2(3)              --------->ALFIN1        --------->ICU4    --------->ANAC46          <---------TOE1(3)   ------>ZmHOX2a(2)                 <---------KAN4(2)    --------->ANAC58     <---------DAG2         <---------ARR11(3)    <---------ANAC58<---------ICU4 ---------HSFB2a(2)      <----------DOF2        --------->ARR11(3)    <---------ANAC58--------->YAB1 -------->HSFB2a(2)<----------DOF2  <---------ANAC58   --------->ANAC46    <----------DOF2--------->TOE2(3)   ttccacaagaaacaagtaagactttgactttttaggtttcttgttctcgtgatcttcacgaaggtgaagcttccctgcttatagggaatcatcattaact  13843200  Previous    Next  AGI:  At2g32600.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO63000.1); contains InterPro domain Zinc finger, C2H2-type matrin; (InterPro:IPR000690); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, U1-type; (InterPro:IPR003604) Range:  from: 13840622    to: 13842740    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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