Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------ALFIN1                      <---------At5g28300 ----------->RAV1(1)           --------->ZAT6                  <----------DOF2        ------->GAMYB               --------->YAB1              <---------ARR11(3)       --------->ANAC58    <---------ICU4        <---------HSFB2a(2)            --------->ANAC58   <---------ATHB12      ------>ZmHOX2a(1) ---DOF2--------->HSFB2a(2)  --------->GLK1(2)       ------->TEIL   <---------ATHB12   gctaatatttctgcaagttcctttaactgcgactctgtctcaacccacacatatgaatcactcatttccaatgaacactctcctctcaaaaatccaaact  13772100       --------->ARR14(2)          <-------TEIL       <---------ARR14(2)   ------>ZmHOX2a(2)           --------->HSFB2a(1)       <---------GLK1(2)  <---------ARR11(3)            <---------HSFB2a(1)      =============================HOX2a_HOX2a         <---------TOE1(2)      <------ZmHOX2a(1)   --------->ARR11(3)           <---------TOE2(2)              <----------ID1    <---------TOE2(3)    --------->ZAT14               <---------TOE1(3)       --------->YAB1   -----   caatctgaggattctctaacaaaacagtgatctcagtttcatatggatgaccattcgaaggtttctctgcattagtttcaaatataaaacaccaaaaatc  13772200                                                                  >>>>>>>>>TBF1                                                         <---------TOE2(3)                  --------->AHL20(2)                    --------->MYB52(1)                --------->TOE2(3)                     --------->AtMYB61         --------->YAB1                 --------->ARR11(3)     >>>>>>>>>TBF1        <-------TEIL ---------->DOF2    <---------ARR11(3) <------ZmHOX2a(1)       <----------DOF2 ---->YAB1     <---------ICU4--------->YAB1        <---------ALFIN1            ------->GAMYB   aaaatgcaaattcataaacattaaaaagcattcaaaacttgagatattgaatcccacctaaggaagaagaagaagcatcaacgagcttcaagtgtttgaa  13772300                          <-------MYC3                                                              <                          ------->MYC3                                                              -                   --------->ANAC58               --------->ZAT2                                  ---                   --------->ANAC58               --------->At4g35610                             ---                --------->LBD16               <-----------HVH21                          <---------At4g35610               --------->ANAC46      ------>MYB83 <---------At4g35610       ---------->DOF2    ------               --------->ANAC58      --------->MYB52(1)       --------->At4g35610        --------->At4g35610               --------->ANAC58      ------>MYB46(1)          <---------At4g35610  <---------ARR11(3)              <---------LBD16      <---------MYB59<---------ZAT2   --------->ZAT6  --------->ARR11(3)   ttcagaataagagttatccgcaagaacacgtttaaaaccaaactgaggcttcagctcagaatgcagataacacgagcttaaagaagatgtctgcttcctc  13772400              --------->ARR14(2)           <------NtERF2          --------->LBD16          <---------ATERF1(1)          ------>NtERF2         <---------DEAR3(1)         --------->RAP2.3(3)         --------->ATERF1(2)         <---------ATERF1(2)         --------->DEAR3(1)         --------->RAP2.3(2)        <---------LBD16        --------->RAP2.3(1)        --------->DEAR3(2)        --------->ORA47(2)        --------->ERF1        --------->DEAR4(2)        <------NtERF2        --------->ATERF1(1)        --------->RAP2.6(1)        --------->RRTF1(1)       <---------RAP2.3(1)       <---------RRTF1(1)       <---------DEAR4(2)       <---------RAP2.6(1)       <---------ATERF1(1)       --------->ABI4(2)       ------>NtERF2       <---------ERF1      --------->DEAR3(1)      --------->RAP2.3(2)      <---------DEAR3(1)     --------->RAP2.6(1)     --------->ATERF1(1)     --------->RRTF1(1)     --------->ERF1     --------->DEAR4(2)     --------->ORA47(2)     --------->RAP2.3(1)     <------NtERF2     <---------ABI4(2)    <---------DEAR4(2)    <---------ERF1    <---------ORA47(2)                                --------->HSFC1(2)    <---------RAP2.3(1)                               <---------HSFC1(2)    <---------RRTF1(1)                               --------->ANAC58    ------>NtERF2                                    ----------->ARR10    <---------ATERF1(1)                      ----------->RAV1(1)    <---------RAP2.6(1)                      ------>NtERF2   <---------DREB2C(2)                      <---------ALFIN1   <---------RAP2.3(3)                      --------->DEAR3(1)   <---------RRTF1(3)                     --------->ABI4(1)   <---------RRTF1(2)                     <---------ATERF1(1)   <---------DEAR3(1)                     ------>NtERF2   <---------RAP2.3(2)   --------->ANAC58--------->ANAC46        <-----------GT1   --------->ATERF1(2)   <---------MYB52(2)--------->ERF1        <---------ICU4   <---------ATERF1(2)   --------->ANAC58--------->DREB2C(2)    --------->ICU4 -----------RAV1(1)   <---------MYB52(1) --------->DEAR3(1)   >>>>>>>>>GT-2             --------->At4g35610 ---------->HVH21    <-----------TGA1   --------->MYB46(3)  --------->At5g28300    <----------DOF2 -------->RAV1(2)    <-----------HVH21 <---------At5g28300 ----------->GT1    <----------DOF2 --->ZmHOX2a(1)     --------->ANAC46<-----------HVH21<---------------AtSPL3  <---------DAG2 >ZmHOX2a(1)  <---------ARR14(2)<---------GLK1(2)    --------->ANAC58  <----------DOF2  <---------At4g35610   ctctggcggcgccggcgatactccgtcacgaacagaattgtcaccgccaccagagaagctacggtaattacgactttagccttttctttgagctccatgt  13772500                                                                                 ---------->DOF2                                                                                 ====================                                                                               <------NtERF2                                                                              ------>NtERF2                                                                              --------->RAP2.6(2)                                                                             <---------DEAR3(1)                                                                             --------->ATERF1(2)                                                                             <---------ATERF1(2)                                                                            --------->ATERF1(1)                                                                            <------NtERF2                                                                           <---------RAP2.3(1)                                                                           <---------ERF1                                                                           <---------DEAR4(2)                                                                           ------>NtERF2                                                                           <---------ATERF1(1)                                       --------->LBD16   <------NtERF2     <---------RRTF1(1)                                      --------->ANAC46 --------->ANAC46   <---------DEAR3(1)                                      --------->LBD16 <---------LBD16     <---------RRTF1(3)     ----                                     <---------HSFB2a(2)--------->LBD16<---------bZIP60(1)      <----                                     <---------LBD16  --------->At4g35610 <---------RAP2.3(3)  <-----                                 *TSS--------->HSFB2a(2)------>NtERF2  <---------O2            <-----                                <---------ZAT6        <---------At4g35610 <---------RAP2.3(2)  <-----                            <---------MYB52(1)<---------ARR14(2)       --------->bZIP60(1)     ------                           <-------GAMYB      --------->GLK1(2)        ----------->HVH21       <-----                          --------->MYB52(2)  --------->ARR14(2)    ----------->TGA1           <-----                          <---------MYB46(3)  <-----------ARR10     ----------->HVH21          ------                        <---------MYB52(1)   <---------GLK1(1)     <-----------HVH21      --------->AtLEC2            --------->TOE2(3) --------->MYB52(2)     <-----------RAV1(1) --------->ATERF1(1)   ------   tttttttcttctaacctcgaaaaactgttcgttagtgttcccggagcaaatctgtctgcggcatttctcggtgacgacggcggcaaagggccatgaagat  13772600                                            <---------ANAC46                                        <-------MYC4                                        ------->MYC4                                        ------->MYC2                                        <-------MYC3                                        ------->MYC3                                        <-------MYC2     ------->MYC3                      --------->ANAC55(2)     <-------MYC2                      <---------ANAC55(2)     ------->MYC2                      --------->O2     ------->MYC4                      <---------O2     <-------MYC4                      --------->TGA1a     <-------MYC3                 ----------->HVH21     -------->ABF1                ------>ZmHOX2a(1)    --------->TGA1a             ------>ZmHOX2a(2)    --------->ANAC55(2)         ----------->RAV1(2)    <---------O2               <------ZmHOX2a(2)    --------->O2              --------->ARR11(3)    <---------TGA1a           --------->ARR14(2)    <---------ANAC55(2)       <---------ARR11(3) =============bZIP_DOF        --------->ARR14(3) -->ZmHOX2a(2)                <---------GLK1(2) --ZmHOX2a(2)                 <---------ARR14(2) ----AGP1<---------ANAC46     <---------ARR14(3) ------ARR10                  --------->AGP1<---------bZIP60(2) ----ARR14(3)               ----------->ARR10 <---------ANAC46 --->ARR14(3)           <-----------HVH21--------->ALFIN1 ----ARR11(3)      <---------ARR14(2)  <---------TGA1a ----ARR14(2)      --------->ARR14(2)  <--------ABF1                             --------->ETT(2) --->ARR11(3)      <---------GLK1(1)<<<<<<<GRF7                                --------->REM1(2)   <- --->ARR14(2)     <---------GLK1(2)<-----------HVH21                           --------->ZAT14     <-   cttaacacgtgtcttatttagaatcccgtcaagatcctgacacgtgttgtggctatggactcaaacaggcccatttgtaagtgtagacataaacttggat  13772700                                                    <---------ALFIN1        --------->MYB52(2)                                                  ------>NtERF2           <---------MYB52(1)                                                 --------->ANAC46       <---------ZAT6                                               <-----------TGA1     <---------ANAC46                                               ------->GAMYB <---------ANAC58     <---------REM1(1)             --------->TOE1(3)      <---------AHL20(2)       <---------ANAC58  <---------MYB46(3)             --------->TOE2(3)--------->YAB1  --------->ANAC46      <---------ANAC58 --------ANAC58        <----------DOF2        --------->MYB46(3)    <---------ANAC58                - --------ANAC58  ---------->DOF2    --------->AHL20(2)       <---------ANAC46<-------GAMYB    <------   tccttggcccaaaaacctcaaaagtctttgaagcatattaaaatttcaacgacaccacttgtgtcttgtgtcttgtgttagttgttgtagtatttttcac  13772800                                                                                 --------->KAN4(2)                                                                                <---------KAN4(1)                                                                               ------->TEIL                                                                            ----------->GT1                                                                            <---------ANAC58                                                                            <---------ANAC46                                                                            <---------ANAC58                                                                            <---------ANAC55(2)                                                                         ----------->HVH21                                                                         ----------->TGA1                                                               ------>MYB83<-----------------------TaNAC69(2)                                                      --------->ATHB12 <---------AtLEC2                                        <---------ANAC58     <---------MYB59<---------ANAC55(1)                                        <---------ANAC46  <---------WRKY18(1)  <---------ARR14(2)                                        <---------ANAC58<---------WOX13(1)<---------TGA2(2)  --------                                   <---------AtLEC2 <---------WOX13(1) --------->ANAC55(2)   <-------                             --------->AHL20(1)   --------->ATHB12<---------ICU4<----------TaMYB80 --------->ID1               <---------AHL20(1)  <---------YAB1------>MYB46(1) --------->ARR14(2) -----GT1 <---------AHL20(2) --------->ARR11(3)--------->CCA1(2) --------->ICU4---------->TaMYB80   ttgttgtcttattttatagcagagaattgaatattttgtatggtgtgtgatatgattgattgacctaatgtttacatgacgtatattccaagaagtccac  13772900                      --------->AHL20(2)                      <---------AHL20(2)                --------->ANAC55(2)                --------->ANAC55(1)                --------->YAB1                ----------->GT1                --------->ANAC58                                       ---------->DOF2                --------->ANAC46                                     ------>ZmHOX2a(1)                --------->ANAC58                                    --------->TOE2(3)               <---------TOE2(3)                          --------->CCA1(1)          --------->YAB1  ---------->DOF2                 --------->RVE1(1)       --------->ZAT6 ->ZAT18  --------->TOE2(3)                        <---------YAB1--------->ARR14(2) --ZAT18  --------->TOE1(3)--------->DAG2 --------->AHL20(2)     <---------ARR14(2)                 -   ctatagtttcaaccataaacgtaattaaaaaagggcaattcaaatttaaaactatgctaaatatccaaatcctaaaagagttttccactaagaaatattt  13773000  Previous    Next  AGI:  At2g32415.1    Description:  3'-5' exonuclease/ nucleic acid binding. similar to 3'-5' exonuclease domain-containing protein / helicase and RNase D C-terminal domain-containing protein / HRDC domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G35910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23996.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79186.1); similar to hypothetical protein OsI_025273 [Oryza sativa (indica cultivar-group)] (GB:EAZ04041.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain 3'-5' exonuclease; (InterPro:IPR002562); contains InterPro dom Range:  from: 13768214    to: 13772533    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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