Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)                                                                                      --------->CCA1(2)                                                                                     <---------ARR11(3)                                                                                     --------->ARR11(3)                                                         <---------ZAT6              --------->ARR14(2)                                               --------->WRKY12                      --------->AGP1                                  --------->DAG2  <---------ANAC46                   <---------ARR14(2)                                 ---------->DOF2<---------WRKY18(1)                  <-----------ARR10    <------ZmHOX2a(1)         ----------->GT1  ----------->HVH21                     <---------AGP1  <---------TOE2(3)      --------->ANAC58      --------->WRKY38(1)               --------->YAB1 -->YAB1                 --------->ANAC58    <----------DOF2<---------WRKY38(1) <---------ATHB12    -   cattgaggatgagaagattagagaactaagcaaggtaaagtttccaactttgacctgtagagtcaatgcgattagaagacgaatcaagatctaagcgaag  13763500                 ------>MYB46(1)             >>>>>>>>>>MYB80       --------->ANAC58                                --------->CCA1(2)       --------->ANAC58                     ----------->RAV1(1)       --------->ANAC46        --------->At4g35610    --------->ARR14(2)   --------->YAB1------>MYB83  <---------At4g35610    <---------ARR14(2)            --------->LBD16  <---------ATHB12        <---------YAB1 --------->ANAC58                         <---------LBD16---- -------->WOX13(1)     <---------YAB1    --------->ANAC58              --------->ANAC46          <---   agcaatcacaagtcaaaccaaattgattattttagctgaaaactagcaacaatgtggatatgaagacttatatacacaaactcatccggacagaagaaaa  13763600                                                                                               ------                                                                                               ------                                                                                               ------                                                                                             --------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                           <---------                                                                                           --------->KAN4(1)                                                                 <---------At4g35610      ---------->TaMYB80                                                                 --------->At4g35610      <---------KAN4(2)                                                            <----------DOF2            --------->LBD16                                   ----------->RAV1(1)   --------------->AGL15        --------->ANAC46    ---------->DOF2   --------->ATHB12                   <---------------AGL15       --------->At4g35610 ----->GLK1(2)<-----------GT1   <-----------GT1       <-----------GT1                <---------At4g35610 ------ARR11(3)      <-------TEIL --------->MYB46(3)<----------DOF2 -------->P       <---------LBD16   atctgaaaaagagtttttacaaattcattgaaattaacaacagtgagacattctctttacctctttgagctaccttctggttctctctgcggaatatacg  13763700    <----------DOF2 --->ANAC58 --->ANAC58                                   --------->MYB52(1) --->ANAC46                ----------->GT1  ------->GAMYB ->CCA1(2)                ----------->GT1  --------->ANAC58 >ARR14(2)              --------->DAG2     --------->ANAC58                     <----------DOF2     - -ARR14(2)             ---------->DOF2     --------->ANAC46                  --------->ARR11(3) ----- >KAN4(2)        ----------->GT1     --------->ANAC46    <-----------GT1     <---------ARR11(3)------ -TaMYB80       ----------->GT1    <-----------GT1 ------->TEIL          <---------ARR11(3)    <-----   caaacactttgtaggcataagttaaaaaagggaaattttacgacaacgcaacgaatttttaacaagagaagtcaagaactatcttttttaaaaaaccatg  13763800                                                                                 <---------At4g35610      <------ZmHOX2a(1)                                                       <<<<<<<<<TBF1   <-----------RAV1(2)                          <---------ICU4         <---------YAB1 ---------->HVH21                               --------->YAB1       <---------ICU4 ---->ATHB12           ----------->GT1         <---------ATHB12     <---------ATHB12 --->ICU4      --------->MYB52(1)         <------ZmHOX2a(2)       --------->WOX13(1) ----YAB1      ---------->DOF2           <---------ARR11(3)  <-------TEIL  <<<<<<<<<TBF1            -   atttgacaggagattactaaaggaagagaaacaaaactagagagatcaaatcatgcccagaaattcatccatcattcttcttcttctgagaacaaaatag  13763900                               <----------DOF2                                                -------                        --------->ZAT14                  ------>ZmHOX2a(1)           <---------ZAT2                   ----------->HVH21        --------->At4g35610                      --------->ZAT2                 --------->ALFIN1           --------->ZAT2                           --------->ZAT14                <-------MYC3   <---------DAG2 --------->ZAT18                        <---------At4g35610                ------->MYC3  *TSS          <---------ZAT2 --------->STY1(2)  --------->YAB1  <------        ----------->GT1 <---------ZAT14     <---------At4g35610             --------->ZAT14 <-------- ---------->GT1 --------->TOE1(2)   <---------YAB1---------->DOF2     <-----------GT1--------->At4g35610   aagagagaaattgaaaaacgtgtgactgaagtgcttttttgattcgagctcacaaagtcctatctagtctatatactctatagtcacagcagccgtttgt  13764000                             <------------CBF                            <---------ICU4                            --------->ATHB12                            --------->ATHB51                           <---------YAB1                           --------->ICU4                         <--------HAHB4                         <---------ICU4                         --------->YAB1                        --------->ICU4                        <---------ATHB12                        <---------YAB1          ------->GAMYB                                       <                   ------>NtERF2               --------->MYB46(3)                                <---                   <---------TCP15(1)         --------->RAP2.6(3)                                <---                   <---------PCF5            <-----------GT1                                    -----                   --------->PCF2            --------->MYB52(1)                                 <----                  --------->TCP20           ----------->HVH21                                <-------                  --------->TCP15(1)      --------->ANAC55(1)           <---------TOE1(3)    --------                  <---------PCF2          --------->ANAC46              <---------TOE2(3)    -------- -->MYB52(2)     <---------TCP23  --------->ZAT18             <---------TOE1(3)             <-------- ---MYB46(3)     <---------TCP15(2)--------->PCF2             <---------TOE2(3)         <---------AHL20(2) -MYB52(1)     --------->ALFIN1   <---------ZAT18 ----------------->AGL1<---------YAB1  --------->AHL20(2)   ttgtatttttgttttcagtggggcccatcattattgggccctacatgtaacggcccattttgttaagtttatttaagattagattacaatataaatattt  13764100       <-------MYC3       ------->MYC3 ---------WOX13(1)     <-----------GT1 ------AHL20(2)    <---------AHL20(1) ------YAB1        <---------AHL20(2)                                                            ---- ---->AHL20(2)     --------->AHL20(2)                               --------->TOE2(3)         <------ -----AHL20(2) <---------ICU4                                      ----------->GT1   --------->AHL20(2) --AHL20(1)    --------->YAB1                                  --------->AHL20(2)    <---------AHL20(2) ->AHL20(2)    <--------HAHB4                                 <---------ATHB12       <---------AHL20(1) ->AHL20(1)   <---------ATHB12         --------->KAN4(2)    --------->WOX13(1)  <---------AHL20(2) -AHL20(2)  --------->WOX13(1)  ---------->DOF2    <---------AHL20(2)     --------->YAB1<---------YAB1   taattgccatgtgttaatcattttatttcttctcaaaagtttattctcttaagttaatttgtcaatgaaatgttaatagtatttcattttatttttgcat  13764200                                                                ----------->GT1                                                                --------->RAP2.6(2)                                                       <---------RVE1(1)                                                      <---------ARR11(3)                                               --------->YAB1  --------->ATERF1(2)               <---                                            --------->YAB1     <---------RAP2.6(2)               ----                                       <---------AHL20(2)      <---------ATERF1(2)          <--------                ----------->GT1  <---------ANAC46     <---------GLK1(2)                    <---------AHL20(2)         --------->LBD16         <---------ANAC58     --------->ARR11(3)                --------->ARR11(3)        --------->ANAC46      <---------DEAR3(1)  --------->YAB1------>NtERF2  <---------ANAC55(2) ------>DOF2   --------->ANAC58  <---------ANAC58 ---------->DOF2<------NtERF2 --------->ANAC55(2) ---AtLEC2     --------->ANAC58 <------NtERF2 <---------YAB1   <---------DEAR3(1)       <---------ARR11(3)   aaagagagacccgtagcaaggcaaaatttgagttggcgttttttattcataataaagatttttaggcggcaaaaaactattacataatgagattttatca  13764300                      --------->AHL20(2)                      --------->AHL20(1)                      <---------AHL20(2)                     <---------AHL20(2)                     --------->AHL20(2)                               --------->AHL20(2)                 <---------AHL20(2)                                   <---------AHL20(2)             --------->ICU4                                       --------------->AGL15           --------->AHL20(2)                                  <-----------GT1     <---------At4g35610    <---------ANAC55(2)            <---------YAB1 ------ANAC55(2) --------->AHL20(2)                      --------->AHL20(2)       <---------YAB1 ----->ANAC55(2)--------->AHL20(2)       <-----------GT1 <---------AHL20(2) <---------AHL20(2) ---GT1    --------->YAB1 --------->AHL20(2)            --------->AHL20(2) --------->AHL20(2)     ---   cttattcatctaataatatttaattaaattacatatgtgtttttttctagctatgtcatttatttttacaatttatataaaattttgatatgtttccatg  13764400  Previous    Next  AGI:  At2g32400.1    Description:  GLR5 (Glutamate receptor 5). Identical to Glutamate receptor 3.7 precursor (GLR3.7) [Arabidopsis Thaliana] (GB:Q9SDQ4;GB:Q9ZV68); similar to ATGLR3.4 (Arabidopsis thaliana glutamate receptor 3.4) [Arabidopsis thaliana] (TAIR:AT1G05200.2); similar to ATGLR3.3 (Arabidopsis thaliana glutamate receptor 3.3) [Arabidopsis thaliana] (TAIR:AT1G42540.1); similar to ATGLR3.4 (Arabidopsis thaliana glutamate receptor 3.4) [Arabidopsis thaliana] (TAIR:AT1G05200.1); similar to hypothetical protein OsJ_021514 [Oryza sativa (japonica cultivar-group)] (GB:EAZ38031.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24137.1); similar to unnamed pro Range:  from: 13759661    to: 13763930    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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